RNA–Protein interactions for RNA: ENST00000463034.5

C4A-246, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 5

Gene C4A, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-246ENST00000463034 NISCHQ9Y2I1 1504 aa42.23■■■■■ 4.35
C4A-246ENST00000463034 CCDC180Q9P1Z9 1646 aa37.69■■■■□ 3.62
C4A-246ENST00000463034 ABCC9O60706 1549 aa37.11■■■■□ 3.53
C4A-246ENST00000463034 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
C4A-246ENST00000463034 NACADO15069 1562 aa35.54■■■■□ 3.28
C4A-246ENST00000463034 DCAF8L2P0C7V8 631 aa35.35■■■■□ 3.25
C4A-246ENST00000463034 MYO15BQ96JP2 1530 aa35.27■■■■□ 3.24
C4A-246ENST00000463034 ZCCHC6Q5VYS8 1495 aaKnown RBP35.1■■■■□ 3.21
C4A-246ENST00000463034 DCAF1Q9Y4B6 1507 aa34.98■■■■□ 3.19
C4A-246ENST00000463034 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
C4A-246ENST00000463034 PABPN1Q86U42 306 aaKnown RBP eCLIP34.62■■■■□ 3.13
C4A-246ENST00000463034 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
C4A-246ENST00000463034 DNAJC5BQ9UF47 199 aa34.36■■■■□ 3.09
C4A-246ENST00000463034 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
C4A-246ENST00000463034 SHROOM4Q9ULL8 1493 aa34.26■■■■□ 3.07
C4A-246ENST00000463034 EIF4G1Q04637 1599 aaKnown RBP33.65■■■□□ 2.98
C4A-246ENST00000463034 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
C4A-246ENST00000463034 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
C4A-246ENST00000463034 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
C4A-246ENST00000463034 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
C4A-246ENST00000463034 BAZ1AQ9NRL2 1556 aaPredicted RBP32.76■■■□□ 2.84
C4A-246ENST00000463034 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
C4A-246ENST00000463034 SMARCA2P51531 1590 aa32.7■■■□□ 2.83
C4A-246ENST00000463034 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
C4A-246ENST00000463034 PEG3Q9GZU2 1588 aa32.54■■■□□ 2.8
C4A-246ENST00000463034 MROH2BQ7Z745 1585 aa32.49■■■□□ 2.79
C4A-246ENST00000463034 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
C4A-246ENST00000463034 WIZO95785 1651 aa32.11■■■□□ 2.73
C4A-246ENST00000463034 ERCC6Q03468 1493 aa32.04■■■□□ 2.72
C4A-246ENST00000463034 RSF1Q96T23 1441 aaPredicted RBP32.04■■■□□ 2.72
C4A-246ENST00000463034 NESP48681 1621 aa32.01■■■□□ 2.72
C4A-246ENST00000463034 LAMC3Q9Y6N6 1575 aa31.97■■■□□ 2.71
C4A-246ENST00000463034 CUX2O14529 1486 aa31.88■■■□□ 2.69
C4A-246ENST00000463034 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
C4A-246ENST00000463034 TOP2AP11388 1531 aaKnown RBP31.8■■■□□ 2.68
C4A-246ENST00000463034 PDS5BQ9NTI5 1447 aa31.79■■■□□ 2.68
C4A-246ENST00000463034 KIF21AQ7Z4S6 1674 aa31.62■■■□□ 2.65
C4A-246ENST00000463034 THOC2Q8NI27 1593 aaKnown RBP31.62■■■□□ 2.65
C4A-246ENST00000463034 CFTRP13569 1480 aa31.56■■■□□ 2.64
C4A-246ENST00000463034 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
C4A-246ENST00000463034 CCDC88BA6NC98 1476 aa31.42■■■□□ 2.62
C4A-246ENST00000463034 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
C4A-246ENST00000463034 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
C4A-246ENST00000463034 WDR62O43379 1518 aa31.34■■■□□ 2.61
C4A-246ENST00000463034 DNAJC5Q9H3Z4 198 aa31.28■■■□□ 2.6
C4A-246ENST00000463034 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
C4A-246ENST00000463034 URB2Q14146 1524 aaKnown RBP31.11■■■□□ 2.57
C4A-246ENST00000463034 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
C4A-246ENST00000463034 ABCC8Q09428 1581 aa30.94■■■□□ 2.54
C4A-246ENST00000463034 TOPBP1Q92547 1522 aa30.88■■■□□ 2.53
C4A-246ENST00000463034 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
C4A-246ENST00000463034 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
C4A-246ENST00000463034 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
C4A-246ENST00000463034 POLA1P09884 1462 aaPredicted RBP30.59■■■□□ 2.49
C4A-246ENST00000463034 TARBP1Q13395 1621 aaKnown RBP30.56■■■□□ 2.48
C4A-246ENST00000463034 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
C4A-246ENST00000463034 CUX1P39880 1505 aa30.51■■■□□ 2.47
C4A-246ENST00000463034 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
C4A-246ENST00000463034 SOGA1O94964 1423 aa30.48■■■□□ 2.47
C4A-246ENST00000463034 FGD5Q6ZNL6 1462 aa30.46■■■□□ 2.47
C4A-246ENST00000463034 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
C4A-246ENST00000463034 AQRO60306 1485 aaKnown RBP eCLIP30.42■■■□□ 2.46
C4A-246ENST00000463034 WDR97A6NE52 1622 aa30.38■■■□□ 2.45
C4A-246ENST00000463034 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
C4A-246ENST00000463034 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.43
C4A-246ENST00000463034 ABCA10Q8WWZ4 1543 aa30.19■■■□□ 2.42
C4A-246ENST00000463034 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
C4A-246ENST00000463034 GRIN2BQ13224 1484 aa30.18■■■□□ 2.42
C4A-246ENST00000463034 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
C4A-246ENST00000463034 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
C4A-246ENST00000463034 CHD1O14646 1710 aa30.14■■■□□ 2.42
C4A-246ENST00000463034 SNAPC4Q5SXM2 1469 aa30.13■■■□□ 2.41
C4A-246ENST00000463034 FBLN2P98095 1184 aa30.12■■■□□ 2.41
C4A-246ENST00000463034 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
C4A-246ENST00000463034 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
C4A-246ENST00000463034 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
C4A-246ENST00000463034 CHMP7Q8WUX9 453 aaPredicted RBP30.03■■■□□ 2.4
C4A-246ENST00000463034 PBRM1Q86U86 1689 aa30.02■■■□□ 2.4
C4A-246ENST00000463034 SYNJ2O15056 1496 aa30.01■■■□□ 2.4
C4A-246ENST00000463034 TRIM41Q8WV44 630 aa30.01■■■□□ 2.39
C4A-246ENST00000463034 RIMBP3CA6NJZ7 1639 aa29.98■■■□□ 2.39
C4A-246ENST00000463034 RIMBP3BA6NNM3 1639 aa29.98■■■□□ 2.39
C4A-246ENST00000463034 RIMBP3Q9UFD9 1639 aa29.98■■■□□ 2.39
C4A-246ENST00000463034 ARHGEF11O15085 1522 aa29.96■■■□□ 2.39
C4A-246ENST00000463034 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
C4A-246ENST00000463034 ERICH3Q5RHP9 1530 aa29.84■■■□□ 2.37
C4A-246ENST00000463034 ADAMTS12P58397 1594 aa29.79■■■□□ 2.36
C4A-246ENST00000463034 FHAD1B1AJZ9 1412 aa29.79■■■□□ 2.36
C4A-246ENST00000463034 GRIN2AQ12879 1464 aa29.76■■■□□ 2.35
C4A-246ENST00000463034 CYB5RLQ6IPT4 315 aa29.7■■■□□ 2.35
C4A-246ENST00000463034 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
C4A-246ENST00000463034 NUP160Q12769 1436 aa29.67■■■□□ 2.34
C4A-246ENST00000463034 KIF27Q86VH2 1401 aa29.64■■■□□ 2.34
C4A-246ENST00000463034 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
C4A-246ENST00000463034 IGF1RP08069 1367 aa29.56■■■□□ 2.32
C4A-246ENST00000463034 CUL7Q14999 1698 aa29.48■■■□□ 2.31
C4A-246ENST00000463034 SHROOM2Q13796 1616 aa29.46■■■□□ 2.31
C4A-246ENST00000463034 JPH4Q96JJ6 628 aa29.37■■■□□ 2.29
C4A-246ENST00000463034 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
C4A-246ENST00000463034 ERCC6L2Q5T890 1561 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms