RNA–Protein interactions for RNA: ENST00000580210.5

RPL17-207, Transcript of ribosomal protein L17, humanhuman

TSL 2 BASIC

Gene RPL17, Length 705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-207ENST00000580210 AEBP2Q6ZN18 517 aaPredicted RBP26.18■■□□□ 1.78
RPL17-207ENST00000580210 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
RPL17-207ENST00000580210 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
RPL17-207ENST00000580210 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
RPL17-207ENST00000580210 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
RPL17-207ENST00000580210 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
RPL17-207ENST00000580210 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
RPL17-207ENST00000580210 ABCC9O60706 1549 aa20.7■□□□□ 0.9
RPL17-207ENST00000580210 FOXD1Q16676 465 aa20.53■□□□□ 0.88
RPL17-207ENST00000580210 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
RPL17-207ENST00000580210 NACADO15069 1562 aa19.97■□□□□ 0.79
RPL17-207ENST00000580210 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
RPL17-207ENST00000580210 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
RPL17-207ENST00000580210 ADRA2BP18089 450 aa19.96■□□□□ 0.79
RPL17-207ENST00000580210 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
RPL17-207ENST00000580210 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
RPL17-207ENST00000580210 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
RPL17-207ENST00000580210 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
RPL17-207ENST00000580210 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
RPL17-207ENST00000580210 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
RPL17-207ENST00000580210 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
RPL17-207ENST00000580210 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
RPL17-207ENST00000580210 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
RPL17-207ENST00000580210 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
RPL17-207ENST00000580210 MSH5O43196 834 aa18.78■□□□□ 0.6
RPL17-207ENST00000580210 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
RPL17-207ENST00000580210 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
RPL17-207ENST00000580210 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
RPL17-207ENST00000580210 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
RPL17-207ENST00000580210 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
RPL17-207ENST00000580210 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
RPL17-207ENST00000580210 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
RPL17-207ENST00000580210 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
RPL17-207ENST00000580210 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
RPL17-207ENST00000580210 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
RPL17-207ENST00000580210 KCNA4P22459 653 aa18.45■□□□□ 0.54
RPL17-207ENST00000580210 WIZO95785 1651 aa18.44■□□□□ 0.54
RPL17-207ENST00000580210 HMGXB3Q12766 1538 aa18.39■□□□□ 0.54
RPL17-207ENST00000580210 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
RPL17-207ENST00000580210 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
RPL17-207ENST00000580210 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.53
RPL17-207ENST00000580210 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
RPL17-207ENST00000580210 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
RPL17-207ENST00000580210 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
RPL17-207ENST00000580210 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
RPL17-207ENST00000580210 NESP48681 1621 aa18■□□□□ 0.47
RPL17-207ENST00000580210 SUPT5HO00267 1087 aaKnown RBP17.98■□□□□ 0.47
RPL17-207ENST00000580210 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
RPL17-207ENST00000580210 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
RPL17-207ENST00000580210 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
RPL17-207ENST00000580210 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
RPL17-207ENST00000580210 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
RPL17-207ENST00000580210 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
RPL17-207ENST00000580210 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
RPL17-207ENST00000580210 CFTRP13569 1480 aa17.82■□□□□ 0.44
RPL17-207ENST00000580210 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
RPL17-207ENST00000580210 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
RPL17-207ENST00000580210 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
RPL17-207ENST00000580210 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
RPL17-207ENST00000580210 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
RPL17-207ENST00000580210 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
RPL17-207ENST00000580210 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
RPL17-207ENST00000580210 WDR62O43379 1518 aa17.58■□□□□ 0.41
RPL17-207ENST00000580210 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
RPL17-207ENST00000580210 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
RPL17-207ENST00000580210 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
RPL17-207ENST00000580210 CUX2O14529 1486 aa17.53■□□□□ 0.4
RPL17-207ENST00000580210 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
RPL17-207ENST00000580210 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
RPL17-207ENST00000580210 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
RPL17-207ENST00000580210 CUX1P39880 1505 aa17.43■□□□□ 0.38
RPL17-207ENST00000580210 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
RPL17-207ENST00000580210 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
RPL17-207ENST00000580210 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
RPL17-207ENST00000580210 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
RPL17-207ENST00000580210 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
RPL17-207ENST00000580210 FGD5Q6ZNL6 1462 aa17.32■□□□□ 0.36
RPL17-207ENST00000580210 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
RPL17-207ENST00000580210 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.365e-6■■■■■ 29.2
RPL17-207ENST00000580210 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
RPL17-207ENST00000580210 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
RPL17-207ENST00000580210 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
RPL17-207ENST00000580210 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
RPL17-207ENST00000580210 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
RPL17-207ENST00000580210 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
RPL17-207ENST00000580210 SOGA1O94964 1423 aa17.18■□□□□ 0.34
RPL17-207ENST00000580210 ABCA10Q8WWZ4 1543 aa17.13■□□□□ 0.33
RPL17-207ENST00000580210 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
RPL17-207ENST00000580210 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
RPL17-207ENST00000580210 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.331e-9■■■■□ 21.2
RPL17-207ENST00000580210 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
RPL17-207ENST00000580210 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
RPL17-207ENST00000580210 CHD1O14646 1710 aa17.02■□□□□ 0.32
RPL17-207ENST00000580210 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
RPL17-207ENST00000580210 ZBTB22O15209 634 aa17.02■□□□□ 0.32
RPL17-207ENST00000580210 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
RPL17-207ENST00000580210 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
RPL17-207ENST00000580210 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
RPL17-207ENST00000580210 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
RPL17-207ENST00000580210 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms