RNA–Protein interactions for RNA: ENST00000224140.5

SETX-201, Transcript of senataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SETX, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-201ENST00000224140 NISCHQ9Y2I1 1504 aa11.85□□□□□ -0.51
SETX-201ENST00000224140 DCAF8L2P0C7V8 631 aa10.62□□□□□ -0.71
SETX-201ENST00000224140 CCDC180Q9P1Z9 1646 aa10.41□□□□□ -0.74
SETX-201ENST00000224140 SUPT5HO00267 1087 aaKnown RBP10.15□□□□□ -0.78
SETX-201ENST00000224140 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
SETX-201ENST00000224140 SHROOM4Q9ULL8 1493 aa10.02□□□□□ -0.81
SETX-201ENST00000224140 APLP2Q06481 763 aa9.9□□□□□ -0.82
SETX-201ENST00000224140 ZCCHC6Q5VYS8 1495 aaKnown RBP9.89□□□□□ -0.83
SETX-201ENST00000224140 DCAF1Q9Y4B6 1507 aa9.87□□□□□ -0.83
SETX-201ENST00000224140 ZEB1P37275 1124 aaPredicted RBP9.85□□□□□ -0.83
SETX-201ENST00000224140 NACADO15069 1562 aa9.78□□□□□ -0.84
SETX-201ENST00000224140 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
SETX-201ENST00000224140 MYO15BQ96JP2 1530 aa9.74□□□□□ -0.85
SETX-201ENST00000224140 PELP1Q8IZL8 1130 aaKnown RBP9.74□□□□□ -0.85
SETX-201ENST00000224140 RB1CC1Q8TDY2 1594 aa9.73□□□□□ -0.85
SETX-201ENST00000224140 ABCC9O60706 1549 aa9.59□□□□□ -0.87
SETX-201ENST00000224140 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
SETX-201ENST00000224140 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
SETX-201ENST00000224140 UBTFP17480 764 aaKnown RBP9.48□□□□□ -0.89
SETX-201ENST00000224140 BAZ1AQ9NRL2 1556 aaPredicted RBP9.43□□□□□ -0.9
SETX-201ENST00000224140 CHIC1Q5VXU3 224 aa9.41□□□□□ -0.9
SETX-201ENST00000224140 CENPBP07199 599 aaPredicted RBP9.41□□□□□ -0.9
SETX-201ENST00000224140 EEA1Q15075 1411 aa9.4□□□□□ -0.91
SETX-201ENST00000224140 ACIN1Q9UKV3 1341 aaKnown RBP9.39□□□□□ -0.91
SETX-201ENST00000224140 MYT1Q01538 1121 aa9.38□□□□□ -0.91
SETX-201ENST00000224140 CCER1Q8TC90 406 aaPredicted RBP9.37□□□□□ -0.91
SETX-201ENST00000224140 PCGF6Q9BYE7 350 aa9.36□□□□□ -0.91
SETX-201ENST00000224140 SMARCA2P51531 1590 aa9.27□□□□□ -0.92
SETX-201ENST00000224140 RSF1Q96T23 1441 aaPredicted RBP9.2□□□□□ -0.94
SETX-201ENST00000224140 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
SETX-201ENST00000224140 BAZ1BQ9UIG0 1483 aaKnown RBP9.19□□□□□ -0.94
SETX-201ENST00000224140 ATP1B4Q9UN42 357 aaPredicted RBP9.18□□□□□ -0.94
SETX-201ENST00000224140 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
SETX-201ENST00000224140 HRCP23327 699 aa9.16□□□□□ -0.94
SETX-201ENST00000224140 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.94
SETX-201ENST00000224140 CDK11AQ9UQ88 783 aaPredicted RBP9.13□□□□□ -0.95
SETX-201ENST00000224140 PABPN1Q86U42 306 aaKnown RBP eCLIP9.12□□□□□ -0.95
SETX-201ENST00000224140 GOLGA3Q08378 1498 aa9.1□□□□□ -0.95
SETX-201ENST00000224140 NEFLP07196 543 aa9.09□□□□□ -0.95
SETX-201ENST00000224140 TOP2AP11388 1531 aaKnown RBP9.09□□□□□ -0.95
SETX-201ENST00000224140 CEP164Q9UPV0 1460 aa9.09□□□□□ -0.95
SETX-201ENST00000224140 CLSPNQ9HAW4 1339 aa9.07□□□□□ -0.96
SETX-201ENST00000224140 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
SETX-201ENST00000224140 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
SETX-201ENST00000224140 WRNQ14191 1432 aaPredicted RBP eCLIP9.05□□□□□ -0.96
SETX-201ENST00000224140 KIF27Q86VH2 1401 aa9.04□□□□□ -0.96
SETX-201ENST00000224140 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
SETX-201ENST00000224140 FHAD1B1AJZ9 1412 aa9□□□□□ -0.97
SETX-201ENST00000224140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9□□□□□ -0.97
SETX-201ENST00000224140 HNRNPUL2Q1KMD3 747 aaKnown RBP9□□□□□ -0.97
SETX-201ENST00000224140 RANGAP1P46060 587 aaPredicted RBP9□□□□□ -0.97
SETX-201ENST00000224140 TNIKQ9UKE5 1360 aa8.98□□□□□ -0.97
SETX-201ENST00000224140 TTBK1Q5TCY1 1321 aaPredicted RBP8.96□□□□□ -0.97
SETX-201ENST00000224140 YTHDC1Q96MU7 727 aaKnown RBP8.96□□□□□ -0.97
SETX-201ENST00000224140 MROH2BQ7Z745 1585 aa8.94□□□□□ -0.98
SETX-201ENST00000224140 WIZO95785 1651 aa8.94□□□□□ -0.98
SETX-201ENST00000224140 PDS5BQ9NTI5 1447 aa8.94□□□□□ -0.98
SETX-201ENST00000224140 CLIP1P30622 1438 aa8.92□□□□□ -0.98
SETX-201ENST00000224140 SLC24A1O60721 1099 aa8.91□□□□□ -0.98
SETX-201ENST00000224140 DIEXFQ68CQ4 756 aaKnown RBP8.89□□□□□ -0.99
SETX-201ENST00000224140 FAM50AQ14320 339 aaKnown RBP8.88□□□□□ -0.99
SETX-201ENST00000224140 CCDC88BA6NC98 1476 aa8.88□□□□□ -0.99
SETX-201ENST00000224140 TIMELESSQ9UNS1 1208 aa8.88□□□□□ -0.99
SETX-201ENST00000224140 CECR2Q9BXF3 1484 aa8.87□□□□□ -0.99
SETX-201ENST00000224140 HMGXB3Q12766 1538 aa8.87□□□□□ -0.99
SETX-201ENST00000224140 CEP162Q5TB80 1403 aa8.87□□□□□ -0.99
SETX-201ENST00000224140 MYT1LQ9UL68 1186 aa8.85□□□□□ -0.99
SETX-201ENST00000224140 ATAD2BQ9ULI0 1458 aa8.84□□□□□ -0.99
SETX-201ENST00000224140 MTUS2Q5JR59 1369 aa8.84□□□□□ -0.99
SETX-201ENST00000224140 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -1
SETX-201ENST00000224140 PEG3Q9GZU2 1588 aa8.82□□□□□ -1
SETX-201ENST00000224140 FMN1Q68DA7 1419 aa8.82□□□□□ -1
SETX-201ENST00000224140 ANP32CO43423 234 aa8.81□□□□□ -1
SETX-201ENST00000224140 NCAPD3P42695 1498 aa8.81□□□□□ -1
SETX-201ENST00000224140 ITGAEP38570 1179 aa8.81□□□□□ -1
SETX-201ENST00000224140 UNC13AQ9UPW8 1703 aa8.8□□□□□ -1
SETX-201ENST00000224140 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
SETX-201ENST00000224140 TRIM52Q96A61 297 aa8.79□□□□□ -1
SETX-201ENST00000224140 CADPSQ9ULU8 1353 aa8.79□□□□□ -1
SETX-201ENST00000224140 TONSLQ96HA7 1378 aa8.78□□□□□ -1
SETX-201ENST00000224140 CHMP7Q8WUX9 453 aaPredicted RBP8.78□□□□□ -1
SETX-201ENST00000224140 ERCC6Q03468 1493 aa8.78□□□□□ -1
SETX-201ENST00000224140 VPS8Q8N3P4 1428 aa8.77□□□□□ -1
SETX-201ENST00000224140 EIF4G1Q04637 1599 aaKnown RBP8.77□□□□□ -1
SETX-201ENST00000224140 TSPY4P0CV99 314 aa8.77□□□□□ -1.01
SETX-201ENST00000224140 TSPY10P0CW01 314 aa8.77□□□□□ -1.01
SETX-201ENST00000224140 ERICH3Q5RHP9 1530 aa8.77□□□□□ -1.01
SETX-201ENST00000224140 KIF21BO75037 1637 aa8.76□□□□□ -1.01
SETX-201ENST00000224140 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
SETX-201ENST00000224140 FBLN2P98095 1184 aa8.74□□□□□ -1.01
SETX-201ENST00000224140 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
SETX-201ENST00000224140 CARMIL1Q5VZK9 1371 aa8.73□□□□□ -1.01
SETX-201ENST00000224140 CUX2O14529 1486 aa8.73□□□□□ -1.01
SETX-201ENST00000224140 NEFMP07197 916 aa8.72□□□□□ -1.01
SETX-201ENST00000224140 PRDM2Q13029 1718 aa8.72□□□□□ -1.01
SETX-201ENST00000224140 PPARGC1BQ86YN6 1023 aaKnown RBP8.72□□□□□ -1.01
SETX-201ENST00000224140 RAPGEF2Q9Y4G8 1499 aa8.71□□□□□ -1.01
SETX-201ENST00000224140 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
SETX-201ENST00000224140 LAMC3Q9Y6N6 1575 aa8.71□□□□□ -1.02
SETX-201ENST00000224140 PLEKHD1A6NEE1 506 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms