RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 NISCHQ9Y2I1 1504 aa41.72■■■■■ 4.27
FSCN1-205ENST00000473330 SHROOM4Q9ULL8 1493 aa35.74■■■■□ 3.31
FSCN1-205ENST00000473330 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
FSCN1-205ENST00000473330 CCDC180Q9P1Z9 1646 aa35.33■■■■□ 3.25
FSCN1-205ENST00000473330 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.22
FSCN1-205ENST00000473330 CHIC1Q5VXU3 224 aa34.43■■■■□ 3.1
FSCN1-205ENST00000473330 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
FSCN1-205ENST00000473330 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
FSCN1-205ENST00000473330 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
FSCN1-205ENST00000473330 HRCP23327 699 aa33.9■■■■□ 3.02
FSCN1-205ENST00000473330 PCGF6Q9BYE7 350 aa33.64■■■□□ 2.98
FSCN1-205ENST00000473330 ABCC9O60706 1549 aa33.43■■■□□ 2.94
FSCN1-205ENST00000473330 LOC105371045A0A1W2PR82 267 aa33.41■■■□□ 2.94
FSCN1-205ENST00000473330 SCRIBQ14160 1630 aa33.15■■■□□ 2.9
FSCN1-205ENST00000473330 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
FSCN1-205ENST00000473330 PPARGC1BQ86YN6 1023 aaKnown RBP33.13■■■□□ 2.89
FSCN1-205ENST00000473330 TRIM26Q12899 539 aaPredicted RBP32.95■■■□□ 2.87
FSCN1-205ENST00000473330 RB1CC1Q8TDY2 1594 aa32.84■■■□□ 2.85
FSCN1-205ENST00000473330 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
FSCN1-205ENST00000473330 NACADO15069 1562 aa32.58■■■□□ 2.81
FSCN1-205ENST00000473330 CECR2Q9BXF3 1484 aa32.53■■■□□ 2.8
FSCN1-205ENST00000473330 FAM9AQ8IZU1 332 aaPredicted RBP32.5■■■□□ 2.79
FSCN1-205ENST00000473330 MROH2BQ7Z745 1585 aa32.46■■■□□ 2.79
FSCN1-205ENST00000473330 ZEB1P37275 1124 aaPredicted RBP32.36■■■□□ 2.77
FSCN1-205ENST00000473330 WIZO95785 1651 aa32.31■■■□□ 2.76
FSCN1-205ENST00000473330 EHMT2Q96KQ7 1210 aa32.19■■■□□ 2.74
FSCN1-205ENST00000473330 BAZ1AQ9NRL2 1556 aaPredicted RBP32.13■■■□□ 2.73
FSCN1-205ENST00000473330 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
FSCN1-205ENST00000473330 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
FSCN1-205ENST00000473330 SMARCA4P51532 1647 aa31.71■■■□□ 2.67
FSCN1-205ENST00000473330 ABCC8Q09428 1581 aa31.69■■■□□ 2.66
FSCN1-205ENST00000473330 CCDC88BA6NC98 1476 aa31.68■■■□□ 2.66
FSCN1-205ENST00000473330 SMARCA2P51531 1590 aa31.64■■■□□ 2.66
FSCN1-205ENST00000473330 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
FSCN1-205ENST00000473330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.56■■■□□ 2.64
FSCN1-205ENST00000473330 WRNQ14191 1432 aaPredicted RBP eCLIP31.53■■■□□ 2.64
FSCN1-205ENST00000473330 CCER1Q8TC90 406 aaPredicted RBP31.48■■■□□ 2.63
FSCN1-205ENST00000473330 SOGA1O94964 1423 aa31.46■■■□□ 2.63
FSCN1-205ENST00000473330 CEP162Q5TB80 1403 aa31.44■■■□□ 2.62
FSCN1-205ENST00000473330 SCAF1Q9H7N4 1312 aaKnown RBP31.42■■■□□ 2.62
FSCN1-205ENST00000473330 TNIKQ9UKE5 1360 aa31.39■■■□□ 2.62
FSCN1-205ENST00000473330 EEA1Q15075 1411 aa31.33■■■□□ 2.61
FSCN1-205ENST00000473330 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
FSCN1-205ENST00000473330 CSRNP3Q8WYN3 585 aa31.29■■■□□ 2.6
FSCN1-205ENST00000473330 TTBK1Q5TCY1 1321 aaPredicted RBP31.25■■■□□ 2.59
FSCN1-205ENST00000473330 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
FSCN1-205ENST00000473330 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
FSCN1-205ENST00000473330 GOLGA3Q08378 1498 aa31.14■■■□□ 2.58
FSCN1-205ENST00000473330 PEG3Q9GZU2 1588 aa31.1■■■□□ 2.57
FSCN1-205ENST00000473330 PELP1Q8IZL8 1130 aaKnown RBP31.09■■■□□ 2.57
FSCN1-205ENST00000473330 PABPN1Q86U42 306 aaKnown RBP eCLIP31.08■■■□□ 2.57
FSCN1-205ENST00000473330 DIEXFQ68CQ4 756 aaKnown RBP31.05■■■□□ 2.56
FSCN1-205ENST00000473330 ACIN1Q9UKV3 1341 aaKnown RBP31.02■■■□□ 2.56
FSCN1-205ENST00000473330 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
FSCN1-205ENST00000473330 NEUROD1Q13562 356 aa30.96■■■□□ 2.55
FSCN1-205ENST00000473330 CEP164Q9UPV0 1460 aa30.93■■■□□ 2.54
FSCN1-205ENST00000473330 KIF21BO75037 1637 aa30.92■■■□□ 2.54
FSCN1-205ENST00000473330 ATAD2BQ9ULI0 1458 aa30.81■■■□□ 2.52
FSCN1-205ENST00000473330 CLIP1P30622 1438 aa30.79■■■□□ 2.52
FSCN1-205ENST00000473330 ZNF316A6NFI3 1004 aaPredicted RBP30.76■■■□□ 2.51
FSCN1-205ENST00000473330 CENPBP07199 599 aaPredicted RBP30.75■■■□□ 2.51
FSCN1-205ENST00000473330 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
FSCN1-205ENST00000473330 VPS8Q8N3P4 1428 aa30.71■■■□□ 2.51
FSCN1-205ENST00000473330 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
FSCN1-205ENST00000473330 HNRNPUL2Q1KMD3 747 aaKnown RBP30.66■■■□□ 2.5
FSCN1-205ENST00000473330 GTF3C3Q9Y5Q9 886 aa30.66■■■□□ 2.5
FSCN1-205ENST00000473330 TOP2BQ02880 1626 aa30.56■■■□□ 2.48
FSCN1-205ENST00000473330 APLP2Q06481 763 aa30.51■■■□□ 2.48
FSCN1-205ENST00000473330 BIVM-ERCC5R4GMW8 1640 aa30.45■■■□□ 2.47
FSCN1-205ENST00000473330 RANGAP1P46060 587 aaPredicted RBP30.43■■■□□ 2.46
FSCN1-205ENST00000473330 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
FSCN1-205ENST00000473330 MIER1Q8N108 512 aa30.36■■■□□ 2.45
FSCN1-205ENST00000473330 PRXQ9BXM0 1461 aa30.35■■■□□ 2.45
FSCN1-205ENST00000473330 YTHDC1Q96MU7 727 aaKnown RBP30.3■■■□□ 2.44
FSCN1-205ENST00000473330 ARAP1Q96P48 1450 aa30.29■■■□□ 2.44
FSCN1-205ENST00000473330 CUX1P39880 1505 aa30.19■■■□□ 2.42
FSCN1-205ENST00000473330 CLSPNQ9HAW4 1339 aa30.18■■■□□ 2.42
FSCN1-205ENST00000473330 HMGXB3Q12766 1538 aa30.18■■■□□ 2.42
FSCN1-205ENST00000473330 DHX57Q6P158 1386 aaKnown RBP30.17■■■□□ 2.42
FSCN1-205ENST00000473330 NCAPD3P42695 1498 aa30.16■■■□□ 2.42
FSCN1-205ENST00000473330 KANK4Q5T7N3 995 aaPredicted RBP30.16■■■□□ 2.42
FSCN1-205ENST00000473330 KIF27Q86VH2 1401 aa30.1■■■□□ 2.41
FSCN1-205ENST00000473330 RRBP1Q9P2E9 1410 aaKnown RBP30.06■■■□□ 2.4
FSCN1-205ENST00000473330 CFTRP13569 1480 aa30.01■■■□□ 2.4
FSCN1-205ENST00000473330 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
FSCN1-205ENST00000473330 CUX2O14529 1486 aa29.94■■■□□ 2.38
FSCN1-205ENST00000473330 CCNB3Q8WWL7 1395 aa29.89■■■□□ 2.38
FSCN1-205ENST00000473330 PRDM2Q13029 1718 aa29.8■■■□□ 2.36
FSCN1-205ENST00000473330 IGF1RP08069 1367 aa29.77■■■□□ 2.36
FSCN1-205ENST00000473330 ITGAEP38570 1179 aa29.71■■■□□ 2.35
FSCN1-205ENST00000473330 TIAM1Q13009 1591 aa29.7■■■□□ 2.35
FSCN1-205ENST00000473330 MAP3K1Q13233 1512 aa29.7■■■□□ 2.34
FSCN1-205ENST00000473330 RAB3GAP2Q9H2M9 1393 aa29.67■■■□□ 2.34
FSCN1-205ENST00000473330 CARMIL1Q5VZK9 1371 aa29.63■■■□□ 2.33
FSCN1-205ENST00000473330 MAPKBP1O60336 1514 aa29.63■■■□□ 2.33
FSCN1-205ENST00000473330 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
FSCN1-205ENST00000473330 FGD5Q6ZNL6 1462 aa29.59■■■□□ 2.33
FSCN1-205ENST00000473330 LRRC9Q6ZRR7 1453 aa29.59■■■□□ 2.33
FSCN1-205ENST00000473330 MYT1Q01538 1121 aa29.55■■■□□ 2.32
FSCN1-205ENST00000473330 SETD5Q9C0A6 1442 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms