RNA–Protein interactions for RNA: ENST00000552297.5

MYL6-221, Transcript of myosin light chain 6, human

TSL 3

Gene MYL6, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MYL6-221	ENST00000552297	NISCH	Q9Y2I1	1504 aa		16.74	■□□□□ 0.27
MYL6-221	ENST00000552297	AEBP2	Q6ZN18	517 aa	Predicted RBP	15.73	■□□□□ 0.11
MYL6-221	ENST00000552297	ABCC9	O60706	1549 aa		15.51	■□□□□ 0.07
MYL6-221	ENST00000552297	CHIC1	Q5VXU3	224 aa		15.48	■□□□□ 0.07
MYL6-221	ENST00000552297	CCDC180	Q9P1Z9	1646 aa		15.32	■□□□□ 0.04
MYL6-221	ENST00000552297	DNAJC5B	Q9UF47	199 aa		14.79	□□□□□ -0.04
MYL6-221	ENST00000552297	RB1CC1	Q8TDY2	1594 aa		14.68	□□□□□ -0.06
MYL6-221	ENST00000552297	NACAD	O15069	1562 aa		14.48	□□□□□ -0.09
MYL6-221	ENST00000552297	UNC13A	Q9UPW8	1703 aa		14.47	□□□□□ -0.09
MYL6-221	ENST00000552297	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.29	□□□□□ -0.12
MYL6-221	ENST00000552297	BICRA	Q9NZM4	1560 aa		14.26	□□□□□ -0.13
MYL6-221	ENST00000552297	MYO15B	Q96JP2	1530 aa		14.18	□□□□□ -0.14
MYL6-221	ENST00000552297	DCAF8L2	P0C7V8	631 aa		14.12	□□□□□ -0.15
MYL6-221	ENST00000552297	SHROOM4	Q9ULL8	1493 aa		14.06	□□□□□ -0.16
MYL6-221	ENST00000552297	CC2D2A	Q9P2K1	1620 aa		14.06	□□□□□ -0.16
MYL6-221	ENST00000552297	CECR2	Q9BXF3	1484 aa		14.02	□□□□□ -0.16
MYL6-221	ENST00000552297	EIF4G1	Q04637	1599 aa	Known RBP	13.94	□□□□□ -0.18
MYL6-221	ENST00000552297	DNAJC5	Q9H3Z4	198 aa		13.89	□□□□□ -0.19
MYL6-221	ENST00000552297	DCAF1	Q9Y4B6	1507 aa		13.85	□□□□□ -0.19
MYL6-221	ENST00000552297	SCRIB	Q14160	1630 aa		13.84	□□□□□ -0.19
MYL6-221	ENST00000552297	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.82	□□□□□ -0.2
MYL6-221	ENST00000552297	CUX2	O14529	1486 aa		13.58	□□□□□ -0.24
MYL6-221	ENST00000552297	PHF23	Q9BUL5	403 aa	Predicted RBP	13.53	□□□□□ -0.24
MYL6-221	ENST00000552297	SENP3	Q9H4L4	574 aa	Predicted RBP	13.5	□□□□□ -0.25
MYL6-221	ENST00000552297	ERCC6	Q03468	1493 aa		13.43	□□□□□ -0.26
MYL6-221	ENST00000552297	NCAPD3	P42695	1498 aa		13.32	□□□□□ -0.28
MYL6-221	ENST00000552297	THOC2	Q8NI27	1593 aa	Known RBP	13.27	□□□□□ -0.29
MYL6-221	ENST00000552297	HMGXB3	Q12766	1538 aa		13.26	□□□□□ -0.29
MYL6-221	ENST00000552297	SMARCA2	P51531	1590 aa		13.23	□□□□□ -0.29
MYL6-221	ENST00000552297	ATAD2B	Q9ULI0	1458 aa		13.23	□□□□□ -0.29
MYL6-221	ENST00000552297	NES	P48681	1621 aa		13.22	□□□□□ -0.29
MYL6-221	ENST00000552297	SMARCA4	P51532	1647 aa		13.19	□□□□□ -0.3
MYL6-221	ENST00000552297	KIF21A	Q7Z4S6	1674 aa		13.17	□□□□□ -0.3
MYL6-221	ENST00000552297	LAMC3	Q9Y6N6	1575 aa		13.16	□□□□□ -0.3
MYL6-221	ENST00000552297	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.1	□□□□□ -0.31
MYL6-221	ENST00000552297	TRIM41	Q8WV44	630 aa		13.09	□□□□□ -0.31
MYL6-221	ENST00000552297	PEG3	Q9GZU2	1588 aa		13.08	□□□□□ -0.32
MYL6-221	ENST00000552297	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.05	□□□□□ -0.32
MYL6-221	ENST00000552297	PDS5B	Q9NTI5	1447 aa		13.01	□□□□□ -0.33
MYL6-221	ENST00000552297	WDR62	O43379	1518 aa		12.97	□□□□□ -0.33
MYL6-221	ENST00000552297	MRC2	Q9UBG0	1479 aa		12.95	□□□□□ -0.34
MYL6-221	ENST00000552297	MROH2B	Q7Z745	1585 aa		12.88	□□□□□ -0.35
MYL6-221	ENST00000552297	CADPS	Q9ULU8	1353 aa		12.86	□□□□□ -0.35
MYL6-221	ENST00000552297	CEP164	Q9UPV0	1460 aa		12.83	□□□□□ -0.36
MYL6-221	ENST00000552297	RIMBP3C	A6NJZ7	1639 aa		12.8	□□□□□ -0.36
MYL6-221	ENST00000552297	RIMBP3B	A6NNM3	1639 aa		12.8	□□□□□ -0.36
MYL6-221	ENST00000552297	RIMBP3	Q9UFD9	1639 aa		12.8	□□□□□ -0.36
MYL6-221	ENST00000552297	OSCAR	Q8IYS5	282 aa		12.79	□□□□□ -0.36
MYL6-221	ENST00000552297	FANCD2	Q9BXW9	1451 aa		12.76	□□□□□ -0.37
MYL6-221	ENST00000552297	WIZ	O95785	1651 aa		12.76	□□□□□ -0.37
MYL6-221	ENST00000552297	PRDM2	Q13029	1718 aa		12.74	□□□□□ -0.37
MYL6-221	ENST00000552297	URB2	Q14146	1524 aa	Known RBP	12.68	□□□□□ -0.38
MYL6-221	ENST00000552297	ARHGEF11	O15085	1522 aa		12.67	□□□□□ -0.38
MYL6-221	ENST00000552297	CFTR	P13569	1480 aa		12.67	□□□□□ -0.38
MYL6-221	ENST00000552297	PLPPR3	Q6T4P5	718 aa		12.64	□□□□□ -0.39
MYL6-221	ENST00000552297	CHD1	O14646	1710 aa		12.59	□□□□□ -0.39
MYL6-221	ENST00000552297	EIF4G3	O43432	1585 aa	Known RBP	12.57	□□□□□ -0.4
MYL6-221	ENST00000552297	IFT140	Q96RY7	1462 aa		12.57	□□□□□ -0.4
MYL6-221	ENST00000552297	TOP2A	P11388	1531 aa	Known RBP	12.57	□□□□□ -0.4
MYL6-221	ENST00000552297	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.56	□□□□□ -0.4
MYL6-221	ENST00000552297	ARAP1	Q96P48	1450 aa		12.52	□□□□□ -0.41
MYL6-221	ENST00000552297	TOPBP1	Q92547	1522 aa		12.49	□□□□□ -0.41
MYL6-221	ENST00000552297	CYB5RL	Q6IPT4	315 aa		12.49	□□□□□ -0.41
MYL6-221	ENST00000552297	TRH	P20396	242 aa	Predicted RBP	12.48	□□□□□ -0.41
MYL6-221	ENST00000552297	RSF1	Q96T23	1441 aa	Predicted RBP	12.47	□□□□□ -0.41
MYL6-221	ENST00000552297	TARBP1	Q13395	1621 aa	Known RBP	12.45	□□□□□ -0.42
MYL6-221	ENST00000552297	DNMBP	Q6XZF7	1577 aa		12.45	□□□□□ -0.42
MYL6-221	ENST00000552297	ABCC8	Q09428	1581 aa		12.44	□□□□□ -0.42
MYL6-221	ENST00000552297	FOXD1	Q16676	465 aa		12.42	□□□□□ -0.42
MYL6-221	ENST00000552297	AQR	O60306	1485 aa	Known RBP eCLIP	12.38	□□□□□ -0.43	8e-9	■■■■■ 103.1
MYL6-221	ENST00000552297	CLASP1	Q7Z460	1538 aa		12.37	□□□□□ -0.43
MYL6-221	ENST00000552297	CCDC88B	A6NC98	1476 aa		12.36	□□□□□ -0.43
MYL6-221	ENST00000552297	WDR97	A6NE52	1622 aa		12.35	□□□□□ -0.43
MYL6-221	ENST00000552297	SYNJ1	O43426	1573 aa		12.34	□□□□□ -0.43
MYL6-221	ENST00000552297	POLA1	P09884	1462 aa	Predicted RBP	12.33	□□□□□ -0.44
MYL6-221	ENST00000552297	FBLN2	P98095	1184 aa		12.31	□□□□□ -0.44
MYL6-221	ENST00000552297	SNAPC4	Q5SXM2	1469 aa		12.28	□□□□□ -0.44
MYL6-221	ENST00000552297	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.27	□□□□□ -0.45
MYL6-221	ENST00000552297	PBRM1	Q86U86	1689 aa		12.26	□□□□□ -0.45
MYL6-221	ENST00000552297	RAD54L2	Q9Y4B4	1467 aa		12.25	□□□□□ -0.45
MYL6-221	ENST00000552297	SOGA1	O94964	1423 aa		12.22	□□□□□ -0.45
MYL6-221	ENST00000552297	TDRD9	Q8NDG6	1382 aa	Known RBP	12.22	□□□□□ -0.45
MYL6-221	ENST00000552297	SYNJ2	O15056	1496 aa		12.21	□□□□□ -0.45
MYL6-221	ENST00000552297	GAPVD1	Q14C86	1478 aa		12.21	□□□□□ -0.45
MYL6-221	ENST00000552297	GRIN2B	Q13224	1484 aa		12.2	□□□□□ -0.46
MYL6-221	ENST00000552297	FGD5	Q6ZNL6	1462 aa		12.2	□□□□□ -0.46
MYL6-221	ENST00000552297	KIF13A	Q9H1H9	1805 aa		12.18	□□□□□ -0.46
MYL6-221	ENST00000552297	CHMP7	Q8WUX9	453 aa	Predicted RBP	12.18	□□□□□ -0.46
MYL6-221	ENST00000552297	CUX1	P39880	1505 aa		12.13	□□□□□ -0.47
MYL6-221	ENST00000552297	ABCA5	Q8WWZ7	1642 aa		12.13	□□□□□ -0.47
MYL6-221	ENST00000552297	ERCC6L2	Q5T890	1561 aa		12.12	□□□□□ -0.47
MYL6-221	ENST00000552297	SHROOM2	Q13796	1616 aa		12.09	□□□□□ -0.47
MYL6-221	ENST00000552297	CEP170	Q5SW79	1584 aa		12.08	□□□□□ -0.48
MYL6-221	ENST00000552297	GRIN2A	Q12879	1464 aa		12.06	□□□□□ -0.48
MYL6-221	ENST00000552297	ABCA10	Q8WWZ4	1543 aa		12.06	□□□□□ -0.48
MYL6-221	ENST00000552297	ADAMTS12	P58397	1594 aa		12.05	□□□□□ -0.48
MYL6-221	ENST00000552297	NUP160	Q12769	1436 aa		12.02	□□□□□ -0.49
MYL6-221	ENST00000552297	KDM6B	O15054	1643 aa		11.97	□□□□□ -0.49
MYL6-221	ENST00000552297	DIP2B	Q9P265	1576 aa		11.96	□□□□□ -0.49
MYL6-221	ENST00000552297	MAPKBP1	O60336	1514 aa		11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms