RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 AEBP2Q6ZN18 517 aaPredicted RBP36.57■■■■□ 3.44
CENPE-207ENST00000515478 CHIC1Q5VXU3 224 aa34.84■■■■□ 3.17
CENPE-207ENST00000515478 SENP3Q9H4L4 574 aaPredicted RBP31.31■■■□□ 2.6
CENPE-207ENST00000515478 PHF23Q9BUL5 403 aaPredicted RBP30.88■■■□□ 2.53
CENPE-207ENST00000515478 FOXD1Q16676 465 aa29.11■■■□□ 2.25
CENPE-207ENST00000515478 PLPPR3Q6T4P5 718 aa27.93■■■□□ 2.06
CENPE-207ENST00000515478 PIAS4Q8N2W9 510 aaPredicted RBP27.32■■□□□ 1.96
CENPE-207ENST00000515478 MSH5O43196 834 aa27.31■■□□□ 1.96
CENPE-207ENST00000515478 PPP6R1Q9UPN7 881 aa27.21■■□□□ 1.95
CENPE-207ENST00000515478 ADRA2BP18089 450 aa27.2■■□□□ 1.94
CENPE-207ENST00000515478 POTEDQ86YR6 584 aa26.51■■□□□ 1.83
CENPE-207ENST00000515478 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
CENPE-207ENST00000515478 MAPK8IP2Q13387 824 aaPredicted RBP24.94■■□□□ 1.58
CENPE-207ENST00000515478 DMRT2Q9Y5R5 561 aa24.78■■□□□ 1.56
CENPE-207ENST00000515478 PPP4R3CPQ6ZMV5 832 aa24.47■■□□□ 1.51
CENPE-207ENST00000515478 CNKSR2Q8WXI2 1034 aa24.01■■□□□ 1.43
CENPE-207ENST00000515478 DCAF8L1A6NGE4 600 aa23.97■■□□□ 1.43
CENPE-207ENST00000515478 HOXD11P31277 338 aaPredicted RBP23.86■■□□□ 1.41
CENPE-207ENST00000515478 RNF216Q9NWF9 866 aaPredicted RBP23.75■■□□□ 1.39
CENPE-207ENST00000515478 NCBP3Q53F19 620 aaKnown RBP23.63■■□□□ 1.37
CENPE-207ENST00000515478 CACNB1Q02641 598 aaPredicted RBP23.46■■□□□ 1.35
CENPE-207ENST00000515478 RNF39Q9H2S5 420 aa23.23■■□□□ 1.31
CENPE-207ENST00000515478 NPM3O75607 178 aaKnown RBP23.17■■□□□ 1.3
CENPE-207ENST00000515478 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
CENPE-207ENST00000515478 C1QBPQ07021 282 aaKnown RBP22.95■■□□□ 1.26
CENPE-207ENST00000515478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
CENPE-207ENST00000515478 KCNA4P22459 653 aa22.77■■□□□ 1.24
CENPE-207ENST00000515478 U3KPZ7 1027 aaPredicted RBP22.29■■□□□ 1.16
CENPE-207ENST00000515478 CAPN15O75808 1086 aa22.06■■□□□ 1.12
CENPE-207ENST00000515478 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
CENPE-207ENST00000515478 SPINK5Q9NQ38 1064 aaPredicted RBP21.98■■□□□ 1.11
CENPE-207ENST00000515478 APLP2Q06481 763 aa21.85■■□□□ 1.09
CENPE-207ENST00000515478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
CENPE-207ENST00000515478 HNRNPUL2Q1KMD3 747 aaKnown RBP21.8■■□□□ 1.08
CENPE-207ENST00000515478 DSG3P32926 999 aa21.78■■□□□ 1.08
CENPE-207ENST00000515478 TRHP20396 242 aaPredicted RBP21.71■■□□□ 1.07
CENPE-207ENST00000515478 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
CENPE-207ENST00000515478 ZNF219Q9P2Y4 722 aaPredicted RBP21.64■■□□□ 1.05
CENPE-207ENST00000515478 SLC4A1APQ9BWU0 796 aaKnown RBP21.58■■□□□ 1.05
CENPE-207ENST00000515478 ABCB7O75027 752 aa21.52■■□□□ 1.04
CENPE-207ENST00000515478 MYCNP04198 464 aaPredicted RBP21.49■■□□□ 1.03
CENPE-207ENST00000515478 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
CENPE-207ENST00000515478 POLA2Q14181 598 aa21.07■□□□□ 0.96
CENPE-207ENST00000515478 RBM42Q9BTD8 480 aaKnown RBP20.9■□□□□ 0.94
CENPE-207ENST00000515478 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.93
CENPE-207ENST00000515478 ZBTB22O15209 634 aa20.86■□□□□ 0.93
CENPE-207ENST00000515478 POTEHQ6S545 545 aa20.83■□□□□ 0.93
CENPE-207ENST00000515478 ZBTB12Q9Y330 459 aaPredicted RBP20.71■□□□□ 0.91
CENPE-207ENST00000515478 ATXN8OSP0DMR3 200 aa20.59■□□□□ 0.89
CENPE-207ENST00000515478 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
CENPE-207ENST00000515478 AKT1S1Q96B36 256 aa20.37■□□□□ 0.85
CENPE-207ENST00000515478 CHRDL2Q6WN34 429 aa20.36■□□□□ 0.85
CENPE-207ENST00000515478 FBLN2P98095 1184 aa20.25■□□□□ 0.83
CENPE-207ENST00000515478 REM2Q8IYK8 340 aaPredicted RBP20.16■□□□□ 0.82
CENPE-207ENST00000515478 SPDYE2BA6NHP3 402 aa20.02■□□□□ 0.8
CENPE-207ENST00000515478 SPDYE6P0CI01 402 aa20.02■□□□□ 0.8
CENPE-207ENST00000515478 SPDYE2Q495Y8 402 aa20.02■□□□□ 0.8
CENPE-207ENST00000515478 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
CENPE-207ENST00000515478 PITPNM1O00562 1244 aa19.95■□□□□ 0.78
CENPE-207ENST00000515478 MKRN4PQ13434 485 aaPredicted RBP19.92■□□□□ 0.78
CENPE-207ENST00000515478 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
CENPE-207ENST00000515478 PIP4P2Q8N4L2 257 aa19.87■□□□□ 0.77
CENPE-207ENST00000515478 ZNF692Q9BU19 519 aaPredicted RBP19.83■□□□□ 0.77
CENPE-207ENST00000515478 FXR2P51116 673 aaKnown RBP eCLIP19.72■□□□□ 0.75
CENPE-207ENST00000515478 CLEC11AQ9Y240 323 aa19.72■□□□□ 0.75
CENPE-207ENST00000515478 SPDYE1Q8NFV5 336 aaPredicted RBP19.69■□□□□ 0.74
CENPE-207ENST00000515478 SSUH2Q9Y2M2 353 aa19.69■□□□□ 0.74
CENPE-207ENST00000515478 HAX1O00165 279 aa19.59■□□□□ 0.73
CENPE-207ENST00000515478 SP7Q8TDD2 431 aaPredicted RBP19.55■□□□□ 0.72
CENPE-207ENST00000515478 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
CENPE-207ENST00000515478 PRKAR2AP13861 404 aaKnown RBP19.48■□□□□ 0.71
CENPE-207ENST00000515478 PRR29P0C7W0 189 aa19.37■□□□□ 0.69
CENPE-207ENST00000515478 CHADLQ6NUI6 762 aa19.26■□□□□ 0.67
CENPE-207ENST00000515478 EVX2Q03828 476 aa19.18■□□□□ 0.66
CENPE-207ENST00000515478 SPDYE4A6NLX3 237 aa19.12■□□□□ 0.65
CENPE-207ENST00000515478 C19orf67A6NJJ6 358 aa19.09■□□□□ 0.65
CENPE-207ENST00000515478 STAG3Q9UJ98 1225 aa19.04■□□□□ 0.64
CENPE-207ENST00000515478 FARP1Q9Y4F1 1045 aaPredicted RBP18.96■□□□□ 0.63
CENPE-207ENST00000515478 CD44P16070 742 aaKnown RBP18.88■□□□□ 0.61
CENPE-207ENST00000515478 GABBR2O75899 941 aa18.84■□□□□ 0.61
CENPE-207ENST00000515478 CREBZFQ9NS37 354 aa18.78■□□□□ 0.6
CENPE-207ENST00000515478 ZRANB1Q9UGI0 708 aa18.64■□□□□ 0.57
CENPE-207ENST00000515478 CLCN6P51797 869 aa18.59■□□□□ 0.57
CENPE-207ENST00000515478 NPM1P06748 294 aaKnown RBP eCLIP18.58■□□□□ 0.56
CENPE-207ENST00000515478 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
CENPE-207ENST00000515478 ZNF579Q8NAF0 562 aaKnown RBP18.52■□□□□ 0.56
CENPE-207ENST00000515478 PROM2Q8N271 834 aa18.51■□□□□ 0.55
CENPE-207ENST00000515478 DCBLD2Q96PD2 775 aa18.45■□□□□ 0.54
CENPE-207ENST00000515478 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
CENPE-207ENST00000515478 PLEKHG5O94827 1062 aa18.37■□□□□ 0.53
CENPE-207ENST00000515478 LHX8Q68G74 356 aa18.36■□□□□ 0.53
CENPE-207ENST00000515478 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
CENPE-207ENST00000515478 PHF12Q96QT6 1004 aa18.33■□□□□ 0.52
CENPE-207ENST00000515478 GALR2O43603 387 aaPredicted RBP18.3■□□□□ 0.52
CENPE-207ENST00000515478 MIER1Q8N108 512 aa18.3■□□□□ 0.52
CENPE-207ENST00000515478 FKBP8Q14318 412 aa18.24■□□□□ 0.51
CENPE-207ENST00000515478 TSPYL2Q9H2G4 693 aaPredicted RBP18.23■□□□□ 0.51
CENPE-207ENST00000515478 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
CENPE-207ENST00000515478 MS4A3Q96HJ5 214 aa18.08■□□□□ 0.48
CENPE-207ENST00000515478 ZBTB47Q9UFB7 747 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms