Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RBM39-215ENST00000442447 644 ntTSL 218.09■□□□□ 0.492e-64■■■□□ 14.9
U2AF2P26368 RBM39-219ENST00000453310 1068 ntTSL 217.82■□□□□ 0.442e-64■■■□□ 14.9
U2AF2P26368 RBM39-213ENST00000433027 611 ntTSL 517.73■□□□□ 0.432e-64■■■□□ 14.9
U2AF2P26368 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.32e-7■■■□□ 14.9
U2AF2P26368 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.082e-7■■■□□ 14.9
U2AF2P26368 POLR2G-202ENST00000524819 1053 ntTSL 314.63□□□□□ -0.072e-7■■■□□ 14.9
U2AF2P26368 POLR2G-203ENST00000525455 919 ntTSL 314.36□□□□□ -0.112e-7■■■□□ 14.9
U2AF2P26368 POLR2G-206ENST00000531944 1556 ntTSL 513.19□□□□□ -0.32e-7■■■□□ 14.9
U2AF2P26368 POLR2G-205ENST00000527435 868 ntTSL 210.74□□□□□ -0.692e-7■■■□□ 14.9
U2AF2P26368 POLR2G-207ENST00000531996 660 ntTSL 310.32□□□□□ -0.762e-7■■■□□ 14.9
U2AF2P26368 POLR2G-208ENST00000533442 388 ntTSL 39.36□□□□□ -0.912e-7■■■□□ 14.9
U2AF2P26368 POLR2G-204ENST00000526368 710 ntTSL 27.38□□□□□ -1.232e-7■■■□□ 14.9
U2AF2P26368 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.86e-9■■■□□ 14.8
U2AF2P26368 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.346e-9■■■□□ 14.8
U2AF2P26368 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.211e-6■■■□□ 14.8
U2AF2P26368 AP3S1-204ENST00000506430 718 ntTSL 519.18■□□□□ 0.661e-6■■■□□ 14.8
U2AF2P26368 AP3S1-202ENST00000395548 1180 ntTSL 1 (best)5.74□□□□□ -1.491e-6■■■□□ 14.8
U2AF2P26368 AP3S1-203ENST00000505423 611 ntTSL 24.67□□□□□ -1.661e-6■■■□□ 14.8
U2AF2P26368 NXF1-214ENST00000533048 922 ntTSL 517.03■□□□□ 0.327e-18■■■□□ 14.8
U2AF2P26368 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.075e-9■■■□□ 14.8
U2AF2P26368 NXF1-215ENST00000533440 579 ntTSL 28.47□□□□□ -1.057e-18■■■□□ 14.8
U2AF2P26368 GTF3C1-204ENST00000564664 933 ntTSL 513.49□□□□□ -0.252e-6■■■□□ 14.8
U2AF2P26368 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.142e-6■■■□□ 14.8
U2AF2P26368 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.612e-6■■■□□ 14.8
U2AF2P26368 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.67■□□□□ 0.262e-8■■■□□ 14.8
U2AF2P26368 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.121e-7■■■□□ 14.8
U2AF2P26368 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.818e-8■■■□□ 14.8
U2AF2P26368 SPG7-217ENST00000568151 544 ntTSL 425.5■■□□□ 1.671e-8■■■□□ 14.8
U2AF2P26368 SPG7-214ENST00000566371 581 ntTSL 324.22■■□□□ 1.471e-8■■■□□ 14.8
U2AF2P26368 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.29■■□□□ 1.321e-8■■■□□ 14.8
U2AF2P26368 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.58■□□□□ 0.577e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-205ENST00000558036 2108 ntTSL 223.57■■□□□ 1.362e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-203ENST00000540017 506 ntTSL 1 (best)20.61■□□□□ 0.892e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.822e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-202ENST00000394082 556 ntTSL 1 (best)19.24■□□□□ 0.672e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-207ENST00000559309 924 ntTSL 517■□□□□ 0.312e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-211ENST00000560433 2440 ntTSL 212.56□□□□□ -0.42e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-212ENST00000560496 824 ntTSL 511.21□□□□□ -0.612e-7■■■□□ 14.8
U2AF2P26368 SNRPA1-208ENST00000559686 625 ntTSL 29.87□□□□□ -0.832e-7■■■□□ 14.8
U2AF2P26368 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.022e-6■■■□□ 14.8
U2AF2P26368 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.842e-6■■■□□ 14.8
U2AF2P26368 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.472e-6■■■□□ 14.8
U2AF2P26368 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.372e-6■■■□□ 14.8
U2AF2P26368 WIPI1-206ENST00000589316 1886 ntTSL 522.74■■□□□ 1.232e-6■■■□□ 14.8
U2AF2P26368 WIPI1-207ENST00000589459 1804 ntTSL 521.34■■□□□ 1.012e-6■■■□□ 14.8
U2AF2P26368 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.07■□□□□ 0.962e-6■■■□□ 14.8
U2AF2P26368 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.132e-6■■■□□ 14.8
U2AF2P26368 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)10.3□□□□□ -0.762e-6■■■□□ 14.8
U2AF2P26368 WIPI1-210ENST00000591744 742 ntTSL 36.62□□□□□ -1.352e-6■■■□□ 14.8
U2AF2P26368 SSR4-209ENST00000482902 2409 ntTSL 221.5■■□□□ 1.035e-15■■■□□ 14.8
U2AF2P26368 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.745e-15■■■□□ 14.8
U2AF2P26368 SSR4-206ENST00000460616 2482 ntTSL 218.62■□□□□ 0.575e-15■■■□□ 14.8
U2AF2P26368 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.275e-15■■■□□ 14.8
U2AF2P26368 SSR4-208ENST00000471880 785 ntTSL 516.52■□□□□ 0.245e-15■■■□□ 14.8
U2AF2P26368 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.195e-15■■■□□ 14.8
U2AF2P26368 SSR4-207ENST00000471724 443 ntTSL 315.99■□□□□ 0.155e-15■■■□□ 14.8
U2AF2P26368 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.59■□□□□ 0.095e-15■■■□□ 14.8
U2AF2P26368 SSR4-211ENST00000486204 658 ntTSL 314.61□□□□□ -0.075e-15■■■□□ 14.8
U2AF2P26368 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.173e-6■■■□□ 14.8
U2AF2P26368 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.213e-6■■■□□ 14.8
U2AF2P26368 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.846e-8■■■□□ 14.8
U2AF2P26368 MMD-202ENST00000571578 670 ntTSL 319.38■□□□□ 0.696e-8■■■□□ 14.8
U2AF2P26368 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.6■■□□□ 1.371e-6■■■□□ 14.8
U2AF2P26368 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.921e-6■■■□□ 14.8
U2AF2P26368 RABGAP1-204ENST00000426918 996 ntTSL 53.98□□□□□ -1.772e-6■■■□□ 14.8
U2AF2P26368 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.964e-7■■■□□ 14.8
U2AF2P26368 RBL2-203ENST00000544405 2025 ntTSL 28.65□□□□□ -1.024e-7■■■□□ 14.8
U2AF2P26368 REV3L-205ENST00000422377 10964 ntTSL 214.96□□□□□ -0.017e-7■■■□□ 14.8
U2AF2P26368 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.5□□□□□ -0.097e-7■■■□□ 14.8
U2AF2P26368 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.277e-7■■■□□ 14.8
U2AF2P26368 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.557e-7■■■□□ 14.8
U2AF2P26368 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.017e-7■■■□□ 14.8
U2AF2P26368 REV3L-206ENST00000434009 10644 ntTSL 22.57□□□□□ -27e-7■■■□□ 14.8
U2AF2P26368 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.655e-9■■■□□ 14.8
U2AF2P26368 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.715e-9■■■□□ 14.8
U2AF2P26368 CD46-209ENST00000367047 3089 ntTSL 5 BASIC10.47□□□□□ -0.735e-9■■■□□ 14.8
U2AF2P26368 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.735e-9■■■□□ 14.8
U2AF2P26368 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.855e-9■■■□□ 14.8
U2AF2P26368 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.875e-9■■■□□ 14.8
U2AF2P26368 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.875e-9■■■□□ 14.8
U2AF2P26368 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.895e-9■■■□□ 14.8
U2AF2P26368 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.895e-9■■■□□ 14.8
U2AF2P26368 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.945e-9■■■□□ 14.8
U2AF2P26368 CD46-212ENST00000469535 7826 ntTSL 1 (best)7.62□□□□□ -1.195e-9■■■□□ 14.8
U2AF2P26368 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.744e-14■■■□□ 14.8
U2AF2P26368 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.74e-14■■■□□ 14.8
U2AF2P26368 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.664e-14■■■□□ 14.8
U2AF2P26368 TMUB2-206ENST00000587326 1839 ntTSL 1 (best)17.79■□□□□ 0.444e-14■■■□□ 14.8
U2AF2P26368 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.324e-14■■■□□ 14.8
U2AF2P26368 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.64■□□□□ 0.254e-14■■■□□ 14.8
U2AF2P26368 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.184e-14■■■□□ 14.8
U2AF2P26368 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC15.95■□□□□ 0.144e-14■■■□□ 14.8
U2AF2P26368 TMUB2-210ENST00000588413 747 ntTSL 215.31■□□□□ 0.044e-14■■■□□ 14.8
U2AF2P26368 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC15.19■□□□□ 0.024e-14■■■□□ 14.8
U2AF2P26368 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC15.06■□□□□ 04e-14■■■□□ 14.8
U2AF2P26368 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC14.84□□□□□ -0.034e-14■■■□□ 14.8
U2AF2P26368 TMUB2-207ENST00000587630 1191 ntTSL 314.28□□□□□ -0.124e-14■■■□□ 14.8
U2AF2P26368 TMUB2-208ENST00000587775 546 ntTSL 310.54□□□□□ -0.724e-14■■■□□ 14.8
U2AF2P26368 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.65□□□□□ -1.993e-7■■■□□ 14.8
U2AF2P26368 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.656e-7■■■□□ 14.8
Retrieved 100 of 36,523 protein–RNA pairs in 182.5 ms