RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 NISCHQ9Y2I1 1504 aa42.8■■■■■ 4.44
AP3S1-204ENST00000506430 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
AP3S1-204ENST00000506430 ABCC9O60706 1549 aa38.02■■■■□ 3.68
AP3S1-204ENST00000506430 RB1CC1Q8TDY2 1594 aa36.23■■■■□ 3.39
AP3S1-204ENST00000506430 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
AP3S1-204ENST00000506430 NACADO15069 1562 aa36.06■■■■□ 3.36
AP3S1-204ENST00000506430 MYO15BQ96JP2 1530 aa35.64■■■■□ 3.3
AP3S1-204ENST00000506430 PABPN1Q86U42 306 aaKnown RBP eCLIP35.53■■■■□ 3.28
AP3S1-204ENST00000506430 ZCCHC6Q5VYS8 1495 aaKnown RBP35.52■■■■□ 3.28
AP3S1-204ENST00000506430 DNAJC5BQ9UF47 199 aa35.49■■■■□ 3.27
AP3S1-204ENST00000506430 UNC13AQ9UPW8 1703 aa35.39■■■■□ 3.26
AP3S1-204ENST00000506430 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.24
AP3S1-204ENST00000506430 BICRAQ9NZM4 1560 aa35.21■■■■□ 3.23
AP3S1-204ENST00000506430 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
AP3S1-204ENST00000506430 SHROOM4Q9ULL8 1493 aa34.66■■■■□ 3.14
AP3S1-204ENST00000506430 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
AP3S1-204ENST00000506430 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
AP3S1-204ENST00000506430 CECR2Q9BXF3 1484 aa34.19■■■■□ 3.06
AP3S1-204ENST00000506430 NCAPD3P42695 1498 aa33.34■■■□□ 2.93
AP3S1-204ENST00000506430 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
AP3S1-204ENST00000506430 SMARCA4P51532 1647 aa33.28■■■□□ 2.92
AP3S1-204ENST00000506430 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
AP3S1-204ENST00000506430 SMARCA2P51531 1590 aa33.15■■■□□ 2.9
AP3S1-204ENST00000506430 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
AP3S1-204ENST00000506430 MROH2BQ7Z745 1585 aa33.01■■■□□ 2.88
AP3S1-204ENST00000506430 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
AP3S1-204ENST00000506430 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.86
AP3S1-204ENST00000506430 NESP48681 1621 aa32.77■■■□□ 2.84
AP3S1-204ENST00000506430 ERCC6Q03468 1493 aa32.76■■■□□ 2.84
AP3S1-204ENST00000506430 WIZO95785 1651 aa32.61■■■□□ 2.81
AP3S1-204ENST00000506430 CUX2O14529 1486 aa32.55■■■□□ 2.8
AP3S1-204ENST00000506430 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
AP3S1-204ENST00000506430 RSF1Q96T23 1441 aaPredicted RBP32.46■■■□□ 2.79
AP3S1-204ENST00000506430 CADPSQ9ULU8 1353 aa32.36■■■□□ 2.77
AP3S1-204ENST00000506430 PDS5BQ9NTI5 1447 aa32.33■■■□□ 2.77
AP3S1-204ENST00000506430 DNAJC5Q9H3Z4 198 aa32.3■■■□□ 2.76
AP3S1-204ENST00000506430 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
AP3S1-204ENST00000506430 KIF21AQ7Z4S6 1674 aa32.25■■■□□ 2.75
AP3S1-204ENST00000506430 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
AP3S1-204ENST00000506430 CFTRP13569 1480 aa32.04■■■□□ 2.72
AP3S1-204ENST00000506430 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
AP3S1-204ENST00000506430 FANCD2Q9BXW9 1451 aa31.97■■■□□ 2.71
AP3S1-204ENST00000506430 CEP164Q9UPV0 1460 aa31.96■■■□□ 2.71
AP3S1-204ENST00000506430 WDR62O43379 1518 aa31.92■■■□□ 2.7
AP3S1-204ENST00000506430 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
AP3S1-204ENST00000506430 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.67
AP3S1-204ENST00000506430 PRDM2Q13029 1718 aa31.6■■■□□ 2.65
AP3S1-204ENST00000506430 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
AP3S1-204ENST00000506430 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
AP3S1-204ENST00000506430 ABCC8Q09428 1581 aa31.31■■■□□ 2.6
AP3S1-204ENST00000506430 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
AP3S1-204ENST00000506430 ZNF608Q9ULD9 1512 aaPredicted RBP31.29■■■□□ 2.6
AP3S1-204ENST00000506430 DNMBPQ6XZF7 1577 aa31.27■■■□□ 2.6
AP3S1-204ENST00000506430 OSCARQ8IYS5 282 aa31.22■■■□□ 2.59
AP3S1-204ENST00000506430 POLA1P09884 1462 aaPredicted RBP31.1■■■□□ 2.57
AP3S1-204ENST00000506430 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
AP3S1-204ENST00000506430 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.56
AP3S1-204ENST00000506430 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
AP3S1-204ENST00000506430 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
AP3S1-204ENST00000506430 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
AP3S1-204ENST00000506430 SOGA1O94964 1423 aa30.99■■■□□ 2.55
AP3S1-204ENST00000506430 CUX1P39880 1505 aa30.98■■■□□ 2.55
AP3S1-204ENST00000506430 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
AP3S1-204ENST00000506430 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
AP3S1-204ENST00000506430 FBLN2P98095 1184 aa30.82■■■□□ 2.52
AP3S1-204ENST00000506430 CHD1O14646 1710 aa30.75■■■□□ 2.51
AP3S1-204ENST00000506430 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
AP3S1-204ENST00000506430 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
AP3S1-204ENST00000506430 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
AP3S1-204ENST00000506430 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
AP3S1-204ENST00000506430 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
AP3S1-204ENST00000506430 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
AP3S1-204ENST00000506430 GRIN2BQ13224 1484 aa30.65■■■□□ 2.5
AP3S1-204ENST00000506430 CHMP7Q8WUX9 453 aaPredicted RBP30.62■■■□□ 2.49
AP3S1-204ENST00000506430 GAPVD1Q14C86 1478 aa30.6■■■□□ 2.49
AP3S1-204ENST00000506430 ABCA10Q8WWZ4 1543 aa30.6■■■□□ 2.49
AP3S1-204ENST00000506430 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
AP3S1-204ENST00000506430 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
AP3S1-204ENST00000506430 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
AP3S1-204ENST00000506430 TOP2BQ02880 1626 aa30.53■■■□□ 2.48
AP3S1-204ENST00000506430 SYNJ2O15056 1496 aa30.51■■■□□ 2.48
AP3S1-204ENST00000506430 CYB5RLQ6IPT4 315 aa30.51■■■□□ 2.47
AP3S1-204ENST00000506430 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.47
AP3S1-204ENST00000506430 ABCA5Q8WWZ7 1642 aa30.5■■■□□ 2.47
AP3S1-204ENST00000506430 PBRM1Q86U86 1689 aa30.49■■■□□ 2.47
AP3S1-204ENST00000506430 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
AP3S1-204ENST00000506430 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
AP3S1-204ENST00000506430 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
AP3S1-204ENST00000506430 ADAMTS12P58397 1594 aa30.25■■■□□ 2.43
AP3S1-204ENST00000506430 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
AP3S1-204ENST00000506430 ERICH3Q5RHP9 1530 aa30.2■■■□□ 2.42
AP3S1-204ENST00000506430 NUP160Q12769 1436 aa30.15■■■□□ 2.42
AP3S1-204ENST00000506430 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
AP3S1-204ENST00000506430 TRHP20396 242 aaPredicted RBP30.05■■■□□ 2.4
AP3S1-204ENST00000506430 ERCC6L2Q5T890 1561 aa30.04■■■□□ 2.4
AP3S1-204ENST00000506430 IGF1RP08069 1367 aa29.99■■■□□ 2.39
AP3S1-204ENST00000506430 KIF27Q86VH2 1401 aa29.98■■■□□ 2.39
AP3S1-204ENST00000506430 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
AP3S1-204ENST00000506430 JPH4Q96JJ6 628 aa29.91■■■□□ 2.38
AP3S1-204ENST00000506430 PRG4Q92954 1404 aaPredicted RBP29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms