RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 NISCHQ9Y2I1 1504 aa45.3■■■■■ 4.84
PCSK6-218ENST00000619160 SHROOM4Q9ULL8 1493 aa39.99■■■■□ 3.99
PCSK6-218ENST00000619160 SUPT5HO00267 1087 aaKnown RBP39.61■■■■□ 3.93
PCSK6-218ENST00000619160 HRCP23327 699 aa38.52■■■■□ 3.76
PCSK6-218ENST00000619160 CHIC1Q5VXU3 224 aa38.47■■■■□ 3.75
PCSK6-218ENST00000619160 DCAF8L2P0C7V8 631 aa38.44■■■■□ 3.74
PCSK6-218ENST00000619160 MYO15BQ96JP2 1530 aa38.4■■■■□ 3.74
PCSK6-218ENST00000619160 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.73
PCSK6-218ENST00000619160 PCGF6Q9BYE7 350 aa38.34■■■■□ 3.73
PCSK6-218ENST00000619160 PPARGC1BQ86YN6 1023 aaKnown RBP38.05■■■■□ 3.68
PCSK6-218ENST00000619160 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.64
PCSK6-218ENST00000619160 LOC105371045A0A1W2PR82 267 aa37.65■■■■□ 3.62
PCSK6-218ENST00000619160 DCAF1Q9Y4B6 1507 aa37.3■■■■□ 3.56
PCSK6-218ENST00000619160 TRIM26Q12899 539 aaPredicted RBP37.13■■■■□ 3.54
PCSK6-218ENST00000619160 PELP1Q8IZL8 1130 aaKnown RBP36.94■■■■□ 3.5
PCSK6-218ENST00000619160 FAM9AQ8IZU1 332 aaPredicted RBP36.7■■■■□ 3.47
PCSK6-218ENST00000619160 EHMT2Q96KQ7 1210 aa36.65■■■■□ 3.46
PCSK6-218ENST00000619160 TRIM41Q8WV44 630 aa36.63■■■■□ 3.45
PCSK6-218ENST00000619160 SCAF1Q9H7N4 1312 aaKnown RBP36.57■■■■□ 3.44
PCSK6-218ENST00000619160 ZEB1P37275 1124 aaPredicted RBP36.55■■■■□ 3.44
PCSK6-218ENST00000619160 ABCC9O60706 1549 aa36.31■■■■□ 3.4
PCSK6-218ENST00000619160 RSF1Q96T23 1441 aaPredicted RBP36.3■■■■□ 3.4
PCSK6-218ENST00000619160 SCRIBQ14160 1630 aa36.14■■■■□ 3.38
PCSK6-218ENST00000619160 RB1CC1Q8TDY2 1594 aa36.01■■■■□ 3.35
PCSK6-218ENST00000619160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.8■■■■□ 3.32
PCSK6-218ENST00000619160 CCER1Q8TC90 406 aaPredicted RBP35.74■■■■□ 3.31
PCSK6-218ENST00000619160 TTBK1Q5TCY1 1321 aaPredicted RBP35.61■■■■□ 3.29
PCSK6-218ENST00000619160 NEUROD1Q13562 356 aa35.57■■■■□ 3.28
PCSK6-218ENST00000619160 CECR2Q9BXF3 1484 aa35.57■■■■□ 3.28
PCSK6-218ENST00000619160 ACIN1Q9UKV3 1341 aaKnown RBP35.51■■■■□ 3.28
PCSK6-218ENST00000619160 GTF3C3Q9Y5Q9 886 aa35.42■■■■□ 3.26
PCSK6-218ENST00000619160 MROH2BQ7Z745 1585 aa35.4■■■■□ 3.26
PCSK6-218ENST00000619160 MYT1Q01538 1121 aa35.38■■■■□ 3.25
PCSK6-218ENST00000619160 DIEXFQ68CQ4 756 aaKnown RBP35.32■■■■□ 3.25
PCSK6-218ENST00000619160 WIZO95785 1651 aa35.21■■■■□ 3.23
PCSK6-218ENST00000619160 CENPBP07199 599 aaPredicted RBP35.19■■■■□ 3.22
PCSK6-218ENST00000619160 NACADO15069 1562 aa34.98■■■■□ 3.19
PCSK6-218ENST00000619160 UBTFP17480 764 aaKnown RBP34.92■■■■□ 3.18
PCSK6-218ENST00000619160 CEP162Q5TB80 1403 aa34.88■■■■□ 3.17
PCSK6-218ENST00000619160 YTHDC1Q96MU7 727 aaKnown RBP34.87■■■■□ 3.17
PCSK6-218ENST00000619160 ABCC8Q09428 1581 aa34.87■■■■□ 3.17
PCSK6-218ENST00000619160 CCDC88BA6NC98 1476 aa34.87■■■■□ 3.17
PCSK6-218ENST00000619160 BAZ1AQ9NRL2 1556 aaPredicted RBP34.83■■■■□ 3.17
PCSK6-218ENST00000619160 ZNF316A6NFI3 1004 aaPredicted RBP34.76■■■■□ 3.16
PCSK6-218ENST00000619160 SOGA1O94964 1423 aa34.76■■■■□ 3.16
PCSK6-218ENST00000619160 WRNQ14191 1432 aaPredicted RBP eCLIP34.75■■■■□ 3.15
PCSK6-218ENST00000619160 EIF4G1Q04637 1599 aaKnown RBP34.69■■■■□ 3.14
PCSK6-218ENST00000619160 CSRNP3Q8WYN3 585 aa34.69■■■■□ 3.14
PCSK6-218ENST00000619160 TNIKQ9UKE5 1360 aa34.65■■■■□ 3.14
PCSK6-218ENST00000619160 HNRNPUL2Q1KMD3 747 aaKnown RBP34.65■■■■□ 3.14
PCSK6-218ENST00000619160 RUSC2Q8N2Y8 1516 aa34.53■■■■□ 3.12
PCSK6-218ENST00000619160 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.11
PCSK6-218ENST00000619160 MIER1Q8N108 512 aa34.48■■■■□ 3.11
PCSK6-218ENST00000619160 RANGAP1P46060 587 aaPredicted RBP34.4■■■■□ 3.1
PCSK6-218ENST00000619160 SMARCA2P51531 1590 aa34.38■■■■□ 3.09
PCSK6-218ENST00000619160 EEA1Q15075 1411 aa34.36■■■■□ 3.09
PCSK6-218ENST00000619160 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
PCSK6-218ENST00000619160 SMARCA4P51532 1647 aa34.3■■■■□ 3.08
PCSK6-218ENST00000619160 APLP2Q06481 763 aa34.29■■■■□ 3.08
PCSK6-218ENST00000619160 PABPN1Q86U42 306 aaKnown RBP eCLIP34.12■■■■□ 3.05
PCSK6-218ENST00000619160 CLIP1P30622 1438 aa34.12■■■■□ 3.05
PCSK6-218ENST00000619160 CEP164Q9UPV0 1460 aa34.03■■■■□ 3.04
PCSK6-218ENST00000619160 VPS8Q8N3P4 1428 aa33.93■■■■□ 3.02
PCSK6-218ENST00000619160 RAPGEF2Q9Y4G8 1499 aa33.81■■■■□ 3
PCSK6-218ENST00000619160 SYNJ1O43426 1573 aa33.8■■■■□ 3
PCSK6-218ENST00000619160 KIF21BO75037 1637 aa33.74■■■□□ 2.99
PCSK6-218ENST00000619160 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
PCSK6-218ENST00000619160 BCL11AQ9H165 835 aa33.64■■■□□ 2.98
PCSK6-218ENST00000619160 DHX57Q6P158 1386 aaKnown RBP33.62■■■□□ 2.97
PCSK6-218ENST00000619160 BAZ1BQ9UIG0 1483 aaKnown RBP33.6■■■□□ 2.97
PCSK6-218ENST00000619160 SUPT16HQ9Y5B9 1047 aaKnown RBP33.6■■■□□ 2.97
PCSK6-218ENST00000619160 ITGAEP38570 1179 aa33.59■■■□□ 2.97
PCSK6-218ENST00000619160 KANK4Q5T7N3 995 aaPredicted RBP33.58■■■□□ 2.97
PCSK6-218ENST00000619160 CLSPNQ9HAW4 1339 aa33.53■■■□□ 2.96
PCSK6-218ENST00000619160 ANP32EQ9BTT0 268 aa33.5■■■□□ 2.95
PCSK6-218ENST00000619160 TSHZ2Q9NRE2 1034 aa33.44■■■□□ 2.94
PCSK6-218ENST00000619160 ATAD2BQ9ULI0 1458 aa33.39■■■□□ 2.94
PCSK6-218ENST00000619160 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
PCSK6-218ENST00000619160 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
PCSK6-218ENST00000619160 KCNH8Q96L42 1107 aa33.3■■■□□ 2.92
PCSK6-218ENST00000619160 ARAP1Q96P48 1450 aa33.3■■■□□ 2.92
PCSK6-218ENST00000619160 BCANQ96GW7 911 aa33.25■■■□□ 2.91
PCSK6-218ENST00000619160 CCNB3Q8WWL7 1395 aa33.2■■■□□ 2.9
PCSK6-218ENST00000619160 TOP2BQ02880 1626 aa33.18■■■□□ 2.9
PCSK6-218ENST00000619160 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
PCSK6-218ENST00000619160 RRBP1Q9P2E9 1410 aaKnown RBP33.14■■■□□ 2.9
PCSK6-218ENST00000619160 ERICH3Q5RHP9 1530 aa33.09■■■□□ 2.89
PCSK6-218ENST00000619160 DDX10Q13206 875 aaKnown RBP33.09■■■□□ 2.89
PCSK6-218ENST00000619160 RAB3GAP2Q9H2M9 1393 aa33.05■■■□□ 2.88
PCSK6-218ENST00000619160 KIF27Q86VH2 1401 aa33.03■■■□□ 2.88
PCSK6-218ENST00000619160 FKBP8Q14318 412 aa33.02■■■□□ 2.88
PCSK6-218ENST00000619160 SIN3AQ96ST3 1273 aa32.98■■■□□ 2.87
PCSK6-218ENST00000619160 FAM50AQ14320 339 aaKnown RBP32.98■■■□□ 2.87
PCSK6-218ENST00000619160 HIRIP3Q9BW71 556 aaPredicted RBP32.96■■■□□ 2.87
PCSK6-218ENST00000619160 ATP1B4Q9UN42 357 aaPredicted RBP32.96■■■□□ 2.87
PCSK6-218ENST00000619160 ARHGAP35Q9NRY4 1499 aa32.93■■■□□ 2.86
PCSK6-218ENST00000619160 BIVM-ERCC5R4GMW8 1640 aa32.9■■■□□ 2.86
PCSK6-218ENST00000619160 CUX2O14529 1486 aa32.9■■■□□ 2.86
PCSK6-218ENST00000619160 CUX1P39880 1505 aa32.86■■■□□ 2.85
PCSK6-218ENST00000619160 NEFLP07196 543 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms