RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 NISCHQ9Y2I1 1504 aa17.86■□□□□ 0.45
FNDC3B-203ENST00000416957 CCDC180Q9P1Z9 1646 aa15.98■□□□□ 0.15
FNDC3B-203ENST00000416957 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
FNDC3B-203ENST00000416957 MYT1Q01538 1121 aa15.46■□□□□ 0.06
FNDC3B-203ENST00000416957 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
FNDC3B-203ENST00000416957 ABCC9O60706 1549 aa15.04■□□□□ -0
FNDC3B-203ENST00000416957 TTBK1Q5TCY1 1321 aaPredicted RBP15.03■□□□□ -0
FNDC3B-203ENST00000416957 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
FNDC3B-203ENST00000416957 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
FNDC3B-203ENST00000416957 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
FNDC3B-203ENST00000416957 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
FNDC3B-203ENST00000416957 NACADO15069 1562 aa14.87□□□□□ -0.03
FNDC3B-203ENST00000416957 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
FNDC3B-203ENST00000416957 ERICH6Q7L0X2 663 aa14.63□□□□□ -0.07
FNDC3B-203ENST00000416957 APLP2Q06481 763 aa14.57□□□□□ -0.08
FNDC3B-203ENST00000416957 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
FNDC3B-203ENST00000416957 DCAF8L2P0C7V8 631 aa14.42□□□□□ -0.1
FNDC3B-203ENST00000416957 DAXXQ9UER7 740 aaPredicted RBP14.41□□□□□ -0.1
FNDC3B-203ENST00000416957 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
FNDC3B-203ENST00000416957 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
FNDC3B-203ENST00000416957 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
FNDC3B-203ENST00000416957 BCL11AQ9H165 835 aa14.06□□□□□ -0.16
FNDC3B-203ENST00000416957 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.18
FNDC3B-203ENST00000416957 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
FNDC3B-203ENST00000416957 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
FNDC3B-203ENST00000416957 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
FNDC3B-203ENST00000416957 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
FNDC3B-203ENST00000416957 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.2
FNDC3B-203ENST00000416957 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
FNDC3B-203ENST00000416957 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
FNDC3B-203ENST00000416957 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
FNDC3B-203ENST00000416957 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
FNDC3B-203ENST00000416957 MROH2BQ7Z745 1585 aa13.7□□□□□ -0.22
FNDC3B-203ENST00000416957 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
FNDC3B-203ENST00000416957 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
FNDC3B-203ENST00000416957 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
FNDC3B-203ENST00000416957 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
FNDC3B-203ENST00000416957 WIZO95785 1651 aa13.58□□□□□ -0.24
FNDC3B-203ENST00000416957 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
FNDC3B-203ENST00000416957 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
FNDC3B-203ENST00000416957 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
FNDC3B-203ENST00000416957 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
FNDC3B-203ENST00000416957 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
FNDC3B-203ENST00000416957 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
FNDC3B-203ENST00000416957 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
FNDC3B-203ENST00000416957 PRDM2Q13029 1718 aa13.34□□□□□ -0.27
FNDC3B-203ENST00000416957 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
FNDC3B-203ENST00000416957 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
FNDC3B-203ENST00000416957 HRCP23327 699 aa13.32□□□□□ -0.28
FNDC3B-203ENST00000416957 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
FNDC3B-203ENST00000416957 CENPBP07199 599 aaPredicted RBP13.29□□□□□ -0.28
FNDC3B-203ENST00000416957 CCDC88BA6NC98 1476 aa13.27□□□□□ -0.29
FNDC3B-203ENST00000416957 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
FNDC3B-203ENST00000416957 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
FNDC3B-203ENST00000416957 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
FNDC3B-203ENST00000416957 ARXQ96QS3 562 aa13.21□□□□□ -0.29
FNDC3B-203ENST00000416957 CFTRP13569 1480 aa13.21□□□□□ -0.29
FNDC3B-203ENST00000416957 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
FNDC3B-203ENST00000416957 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
FNDC3B-203ENST00000416957 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
FNDC3B-203ENST00000416957 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
FNDC3B-203ENST00000416957 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
FNDC3B-203ENST00000416957 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
FNDC3B-203ENST00000416957 NESP48681 1621 aa13.08□□□□□ -0.32
FNDC3B-203ENST00000416957 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
FNDC3B-203ENST00000416957 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
FNDC3B-203ENST00000416957 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
FNDC3B-203ENST00000416957 ABCC8Q09428 1581 aa13□□□□□ -0.33
FNDC3B-203ENST00000416957 WDR62O43379 1518 aa13□□□□□ -0.33
FNDC3B-203ENST00000416957 MRC2Q9UBG0 1479 aa13□□□□□ -0.33
FNDC3B-203ENST00000416957 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
FNDC3B-203ENST00000416957 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
FNDC3B-203ENST00000416957 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
FNDC3B-203ENST00000416957 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
FNDC3B-203ENST00000416957 ANP32EQ9BTT0 268 aa12.94□□□□□ -0.34
FNDC3B-203ENST00000416957 CUX2O14529 1486 aa12.93□□□□□ -0.34
FNDC3B-203ENST00000416957 PKNOX2Q96KN3 472 aa12.93□□□□□ -0.34
FNDC3B-203ENST00000416957 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
FNDC3B-203ENST00000416957 URB2Q14146 1524 aaKnown RBP12.9□□□□□ -0.34
FNDC3B-203ENST00000416957 TOP2BQ02880 1626 aa12.9□□□□□ -0.34
FNDC3B-203ENST00000416957 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.35
FNDC3B-203ENST00000416957 TOPBP1Q92547 1522 aa12.89□□□□□ -0.35
FNDC3B-203ENST00000416957 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
FNDC3B-203ENST00000416957 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
FNDC3B-203ENST00000416957 CUX1P39880 1505 aa12.87□□□□□ -0.35
FNDC3B-203ENST00000416957 WRNQ14191 1432 aaPredicted RBP eCLIP12.85□□□□□ -0.35
FNDC3B-203ENST00000416957 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
FNDC3B-203ENST00000416957 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
FNDC3B-203ENST00000416957 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
FNDC3B-203ENST00000416957 HOMEZQ8IX15 550 aa12.81□□□□□ -0.36
FNDC3B-203ENST00000416957 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
FNDC3B-203ENST00000416957 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
FNDC3B-203ENST00000416957 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.37
FNDC3B-203ENST00000416957 FGD5Q6ZNL6 1462 aa12.77□□□□□ -0.37
FNDC3B-203ENST00000416957 PDE4CQ08493 712 aa12.76□□□□□ -0.37
FNDC3B-203ENST00000416957 ABCA10Q8WWZ4 1543 aa12.73□□□□□ -0.37
FNDC3B-203ENST00000416957 NEFLP07196 543 aa12.73□□□□□ -0.37
FNDC3B-203ENST00000416957 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.38
FNDC3B-203ENST00000416957 ACIN1Q9UKV3 1341 aaKnown RBP12.7□□□□□ -0.38
FNDC3B-203ENST00000416957 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms