RNA–Protein interactions for RNA: ENST00000505423.1

AP3S1-203, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-203ENST00000505423 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
AP3S1-203ENST00000505423 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
AP3S1-203ENST00000505423 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
AP3S1-203ENST00000505423 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
AP3S1-203ENST00000505423 FOXD1Q16676 465 aa18.44■□□□□ 0.54
AP3S1-203ENST00000505423 PLPPR3Q6T4P5 718 aa17.54■□□□□ 0.4
AP3S1-203ENST00000505423 MSH5O43196 834 aa17.33■□□□□ 0.36
AP3S1-203ENST00000505423 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
AP3S1-203ENST00000505423 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
AP3S1-203ENST00000505423 ADRA2BP18089 450 aa17.16■□□□□ 0.34
AP3S1-203ENST00000505423 POTEDQ86YR6 584 aa17■□□□□ 0.31
AP3S1-203ENST00000505423 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
AP3S1-203ENST00000505423 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
AP3S1-203ENST00000505423 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
AP3S1-203ENST00000505423 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
AP3S1-203ENST00000505423 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
AP3S1-203ENST00000505423 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
AP3S1-203ENST00000505423 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
AP3S1-203ENST00000505423 CACNB1Q02641 598 aaPredicted RBP14.96□□□□□ -0.01
AP3S1-203ENST00000505423 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
AP3S1-203ENST00000505423 NCBP3Q53F19 620 aaKnown RBP14.78□□□□□ -0.04
AP3S1-203ENST00000505423 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
AP3S1-203ENST00000505423 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
AP3S1-203ENST00000505423 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
AP3S1-203ENST00000505423 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
AP3S1-203ENST00000505423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
AP3S1-203ENST00000505423 KCNA4P22459 653 aa14.18□□□□□ -0.14
AP3S1-203ENST00000505423 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
AP3S1-203ENST00000505423 CAPN15O75808 1086 aa13.94□□□□□ -0.18
AP3S1-203ENST00000505423 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
AP3S1-203ENST00000505423 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
AP3S1-203ENST00000505423 DSG3P32926 999 aa13.79□□□□□ -0.2
AP3S1-203ENST00000505423 APLP2Q06481 763 aa13.74□□□□□ -0.21
AP3S1-203ENST00000505423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
AP3S1-203ENST00000505423 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
AP3S1-203ENST00000505423 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
AP3S1-203ENST00000505423 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
AP3S1-203ENST00000505423 ABCB7O75027 752 aa13.6□□□□□ -0.23
AP3S1-203ENST00000505423 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
AP3S1-203ENST00000505423 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
AP3S1-203ENST00000505423 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
AP3S1-203ENST00000505423 POTEHQ6S545 545 aa13.34□□□□□ -0.27
AP3S1-203ENST00000505423 POLA2Q14181 598 aa13.28□□□□□ -0.28
AP3S1-203ENST00000505423 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
AP3S1-203ENST00000505423 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
AP3S1-203ENST00000505423 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
AP3S1-203ENST00000505423 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
AP3S1-203ENST00000505423 ZBTB22O15209 634 aa13□□□□□ -0.33
AP3S1-203ENST00000505423 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
AP3S1-203ENST00000505423 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
AP3S1-203ENST00000505423 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
AP3S1-203ENST00000505423 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
AP3S1-203ENST00000505423 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
AP3S1-203ENST00000505423 FBLN2P98095 1184 aa12.69□□□□□ -0.38
AP3S1-203ENST00000505423 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
AP3S1-203ENST00000505423 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
AP3S1-203ENST00000505423 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
AP3S1-203ENST00000505423 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
AP3S1-203ENST00000505423 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
AP3S1-203ENST00000505423 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
AP3S1-203ENST00000505423 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
AP3S1-203ENST00000505423 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
AP3S1-203ENST00000505423 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
AP3S1-203ENST00000505423 HAX1O00165 279 aa12.45□□□□□ -0.42
AP3S1-203ENST00000505423 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
AP3S1-203ENST00000505423 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
AP3S1-203ENST00000505423 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
AP3S1-203ENST00000505423 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
AP3S1-203ENST00000505423 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
AP3S1-203ENST00000505423 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
AP3S1-203ENST00000505423 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
AP3S1-203ENST00000505423 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
AP3S1-203ENST00000505423 EVX2Q03828 476 aa12.19□□□□□ -0.46
AP3S1-203ENST00000505423 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
AP3S1-203ENST00000505423 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
AP3S1-203ENST00000505423 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
AP3S1-203ENST00000505423 GABBR2O75899 941 aa11.95□□□□□ -0.5
AP3S1-203ENST00000505423 SPDYE4A6NLX3 237 aa11.94□□□□□ -0.5
AP3S1-203ENST00000505423 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
AP3S1-203ENST00000505423 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
AP3S1-203ENST00000505423 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
AP3S1-203ENST00000505423 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
AP3S1-203ENST00000505423 CLCN6P51797 869 aa11.74□□□□□ -0.53
AP3S1-203ENST00000505423 LHX8Q68G74 356 aa11.71□□□□□ -0.53
AP3S1-203ENST00000505423 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
AP3S1-203ENST00000505423 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
AP3S1-203ENST00000505423 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
AP3S1-203ENST00000505423 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
AP3S1-203ENST00000505423 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
AP3S1-203ENST00000505423 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
AP3S1-203ENST00000505423 PHF12Q96QT6 1004 aa11.57□□□□□ -0.56
AP3S1-203ENST00000505423 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
AP3S1-203ENST00000505423 PROM2Q8N271 834 aa11.52□□□□□ -0.57
AP3S1-203ENST00000505423 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
AP3S1-203ENST00000505423 TSPYL2Q9H2G4 693 aaPredicted RBP11.46□□□□□ -0.57
AP3S1-203ENST00000505423 MIER1Q8N108 512 aa11.43□□□□□ -0.58
AP3S1-203ENST00000505423 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
AP3S1-203ENST00000505423 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
AP3S1-203ENST00000505423 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
AP3S1-203ENST00000505423 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms