RNA–Protein interactions for RNA: ENST00000262065.7

MMD-201, Transcript of monocyte to macrophage differentiation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMD, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMD-201ENST00000262065 NISCHQ9Y2I1 1504 aa47.89■■■■■ 5.26
MMD-201ENST00000262065 SHROOM4Q9ULL8 1493 aa40.93■■■■■ 4.14
MMD-201ENST00000262065 CCDC180Q9P1Z9 1646 aa40.67■■■■■ 4.1
MMD-201ENST00000262065 ZCCHC6Q5VYS8 1495 aaKnown RBP40.49■■■■■ 4.07
MMD-201ENST00000262065 SUPT5HO00267 1087 aaKnown RBP40.09■■■■■ 4.01
MMD-201ENST00000262065 DCAF8L2P0C7V8 631 aa39.86■■■■□ 3.97
MMD-201ENST00000262065 DCAF1Q9Y4B6 1507 aa39.22■■■■□ 3.87
MMD-201ENST00000262065 CHIC1Q5VXU3 224 aa38.91■■■■□ 3.82
MMD-201ENST00000262065 MYO15BQ96JP2 1530 aa38.78■■■■□ 3.8
MMD-201ENST00000262065 SCRIBQ14160 1630 aa38.23■■■■□ 3.71
MMD-201ENST00000262065 ABCC9O60706 1549 aa38.18■■■■□ 3.7
MMD-201ENST00000262065 RSF1Q96T23 1441 aaPredicted RBP37.91■■■■□ 3.66
MMD-201ENST00000262065 LOC105371045A0A1W2PR82 267 aa37.82■■■■□ 3.65
MMD-201ENST00000262065 PCGF6Q9BYE7 350 aa37.67■■■■□ 3.62
MMD-201ENST00000262065 NACADO15069 1562 aa37.63■■■■□ 3.62
MMD-201ENST00000262065 HRCP23327 699 aa37.58■■■■□ 3.61
MMD-201ENST00000262065 RB1CC1Q8TDY2 1594 aa37.52■■■■□ 3.6
MMD-201ENST00000262065 CECR2Q9BXF3 1484 aa37.44■■■■□ 3.58
MMD-201ENST00000262065 TRIM41Q8WV44 630 aa37.3■■■■□ 3.56
MMD-201ENST00000262065 MROH2BQ7Z745 1585 aa37.28■■■■□ 3.56
MMD-201ENST00000262065 WIZO95785 1651 aa37.08■■■■□ 3.53
MMD-201ENST00000262065 FAM9AQ8IZU1 332 aaPredicted RBP37.08■■■■□ 3.53
MMD-201ENST00000262065 PPARGC1BQ86YN6 1023 aaKnown RBP36.93■■■■□ 3.5
MMD-201ENST00000262065 TRIM26Q12899 539 aaPredicted RBP36.9■■■■□ 3.5
MMD-201ENST00000262065 EHMT2Q96KQ7 1210 aa36.82■■■■□ 3.48
MMD-201ENST00000262065 BAZ1AQ9NRL2 1556 aaPredicted RBP36.77■■■■□ 3.48
MMD-201ENST00000262065 UNC13AQ9UPW8 1703 aa36.56■■■■□ 3.44
MMD-201ENST00000262065 EIF4G1Q04637 1599 aaKnown RBP36.51■■■■□ 3.43
MMD-201ENST00000262065 SMARCA4P51532 1647 aa36.48■■■■□ 3.43
MMD-201ENST00000262065 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
MMD-201ENST00000262065 CCDC88BA6NC98 1476 aa36.34■■■■□ 3.41
MMD-201ENST00000262065 SMARCA2P51531 1590 aa36.26■■■■□ 3.4
MMD-201ENST00000262065 ABCC8Q09428 1581 aa36.26■■■■□ 3.4
MMD-201ENST00000262065 PABPN1Q86U42 306 aaKnown RBP eCLIP36.26■■■■□ 3.39
MMD-201ENST00000262065 BICRAQ9NZM4 1560 aa36.11■■■■□ 3.37
MMD-201ENST00000262065 ZEB1P37275 1124 aaPredicted RBP35.99■■■■□ 3.35
MMD-201ENST00000262065 SOGA1O94964 1423 aa35.91■■■■□ 3.34
MMD-201ENST00000262065 RUSC2Q8N2Y8 1516 aa35.76■■■■□ 3.32
MMD-201ENST00000262065 PEG3Q9GZU2 1588 aa35.74■■■■□ 3.31
MMD-201ENST00000262065 CEP162Q5TB80 1403 aa35.68■■■■□ 3.3
MMD-201ENST00000262065 CSRNP3Q8WYN3 585 aa35.67■■■■□ 3.3
MMD-201ENST00000262065 WRNQ14191 1432 aaPredicted RBP eCLIP35.6■■■■□ 3.29
MMD-201ENST00000262065 TTBK1Q5TCY1 1321 aaPredicted RBP35.6■■■■□ 3.29
MMD-201ENST00000262065 TNIKQ9UKE5 1360 aa35.59■■■■□ 3.29
MMD-201ENST00000262065 EEA1Q15075 1411 aa35.58■■■■□ 3.29
MMD-201ENST00000262065 ATAD2BQ9ULI0 1458 aa35.58■■■■□ 3.29
MMD-201ENST00000262065 UBTFP17480 764 aaKnown RBP35.56■■■■□ 3.28
MMD-201ENST00000262065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.53■■■■□ 3.28
MMD-201ENST00000262065 BAZ1BQ9UIG0 1483 aaKnown RBP35.47■■■■□ 3.27
MMD-201ENST00000262065 SYNJ1O43426 1573 aa35.45■■■■□ 3.27
MMD-201ENST00000262065 GOLGA3Q08378 1498 aa35.4■■■■□ 3.26
MMD-201ENST00000262065 CCER1Q8TC90 406 aaPredicted RBP35.38■■■■□ 3.25
MMD-201ENST00000262065 CEP164Q9UPV0 1460 aa35.19■■■■□ 3.22
MMD-201ENST00000262065 KIF21BO75037 1637 aa35.14■■■■□ 3.22
MMD-201ENST00000262065 CLIP1P30622 1438 aa35.02■■■■□ 3.2
MMD-201ENST00000262065 RAPGEF2Q9Y4G8 1499 aa35.02■■■■□ 3.2
MMD-201ENST00000262065 TOP2BQ02880 1626 aa34.97■■■■□ 3.19
MMD-201ENST00000262065 RANGAP1P46060 587 aaPredicted RBP34.95■■■■□ 3.19
MMD-201ENST00000262065 NCAPD3P42695 1498 aa34.86■■■■□ 3.17
MMD-201ENST00000262065 VPS8Q8N3P4 1428 aa34.84■■■■□ 3.17
MMD-201ENST00000262065 BIVM-ERCC5R4GMW8 1640 aa34.83■■■■□ 3.17
MMD-201ENST00000262065 HMGXB3Q12766 1538 aa34.82■■■■□ 3.16
MMD-201ENST00000262065 HNRNPUL2Q1KMD3 747 aaKnown RBP34.76■■■■□ 3.16
MMD-201ENST00000262065 CUX1P39880 1505 aa34.69■■■■□ 3.14
MMD-201ENST00000262065 APLP2Q06481 763 aa34.69■■■■□ 3.14
MMD-201ENST00000262065 DIEXFQ68CQ4 756 aaKnown RBP34.64■■■■□ 3.14
MMD-201ENST00000262065 PRXQ9BXM0 1461 aa34.63■■■■□ 3.13
MMD-201ENST00000262065 SCAF1Q9H7N4 1312 aaKnown RBP34.61■■■■□ 3.13
MMD-201ENST00000262065 CFTRP13569 1480 aa34.58■■■■□ 3.13
MMD-201ENST00000262065 ERICH3Q5RHP9 1530 aa34.57■■■■□ 3.13
MMD-201ENST00000262065 KIF27Q86VH2 1401 aa34.49■■■■□ 3.11
MMD-201ENST00000262065 ARAP1Q96P48 1450 aa34.48■■■■□ 3.11
MMD-201ENST00000262065 ZNF316A6NFI3 1004 aaPredicted RBP34.39■■■■□ 3.1
MMD-201ENST00000262065 KANK4Q5T7N3 995 aaPredicted RBP34.35■■■■□ 3.09
MMD-201ENST00000262065 NEUROD1Q13562 356 aa34.3■■■■□ 3.08
MMD-201ENST00000262065 ACIN1Q9UKV3 1341 aaKnown RBP34.28■■■■□ 3.08
MMD-201ENST00000262065 PRDM2Q13029 1718 aa34.24■■■■□ 3.07
MMD-201ENST00000262065 CADPSQ9ULU8 1353 aa34.22■■■■□ 3.07
MMD-201ENST00000262065 CUX2O14529 1486 aa34.21■■■■□ 3.07
MMD-201ENST00000262065 ARHGAP35Q9NRY4 1499 aa34.19■■■■□ 3.06
MMD-201ENST00000262065 IGF1RP08069 1367 aa34.16■■■■□ 3.06
MMD-201ENST00000262065 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
MMD-201ENST00000262065 CC2D2AQ9P2K1 1620 aa34.05■■■■□ 3.04
MMD-201ENST00000262065 CENPBP07199 599 aaPredicted RBP34.05■■■■□ 3.04
MMD-201ENST00000262065 DHX57Q6P158 1386 aaKnown RBP34.02■■■■□ 3.04
MMD-201ENST00000262065 RRBP1Q9P2E9 1410 aaKnown RBP34.01■■■■□ 3.04
MMD-201ENST00000262065 CARMIL1Q5VZK9 1371 aa34■■■■□ 3.03
MMD-201ENST00000262065 MIER1Q8N108 512 aa33.95■■■■□ 3.02
MMD-201ENST00000262065 GTF3C3Q9Y5Q9 886 aa33.92■■■■□ 3.02
MMD-201ENST00000262065 FANCD2Q9BXW9 1451 aa33.9■■■■□ 3.02
MMD-201ENST00000262065 CCNB3Q8WWL7 1395 aa33.9■■■■□ 3.02
MMD-201ENST00000262065 ITGAEP38570 1179 aa33.89■■■■□ 3.02
MMD-201ENST00000262065 YTHDC1Q96MU7 727 aaKnown RBP33.88■■■■□ 3.01
MMD-201ENST00000262065 CLSPNQ9HAW4 1339 aa33.87■■■■□ 3.01
MMD-201ENST00000262065 RAD54L2Q9Y4B4 1467 aa33.79■■■■□ 3
MMD-201ENST00000262065 P3H3Q8IVL6 736 aa33.78■■■■□ 3
MMD-201ENST00000262065 TIAM1Q13009 1591 aa33.77■■■■□ 3
MMD-201ENST00000262065 NESP48681 1621 aa33.76■■■□□ 2.99
MMD-201ENST00000262065 DNMBPQ6XZF7 1577 aa33.7■■■□□ 2.99
MMD-201ENST00000262065 TOPBP1Q92547 1522 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms