RNA–Protein interactions for RNA: ENST00000426918.2

RABGAP1-204, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 5

Gene RABGAP1, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-204ENST00000426918 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
RABGAP1-204ENST00000426918 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
RABGAP1-204ENST00000426918 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
RABGAP1-204ENST00000426918 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
RABGAP1-204ENST00000426918 FOXD1Q16676 465 aa13.97□□□□□ -0.17
RABGAP1-204ENST00000426918 MSH5O43196 834 aa13.22□□□□□ -0.29
RABGAP1-204ENST00000426918 PLPPR3Q6T4P5 718 aa13.15□□□□□ -0.3
RABGAP1-204ENST00000426918 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
RABGAP1-204ENST00000426918 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
RABGAP1-204ENST00000426918 ADRA2BP18089 450 aa12.89□□□□□ -0.35
RABGAP1-204ENST00000426918 PPP6R1Q9UPN7 881 aa12.89□□□□□ -0.35
RABGAP1-204ENST00000426918 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
RABGAP1-204ENST00000426918 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
RABGAP1-204ENST00000426918 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
RABGAP1-204ENST00000426918 DCAF8L1A6NGE4 600 aa11.52□□□□□ -0.57
RABGAP1-204ENST00000426918 CACNB1Q02641 598 aaPredicted RBP11.47□□□□□ -0.57
RABGAP1-204ENST00000426918 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
RABGAP1-204ENST00000426918 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
RABGAP1-204ENST00000426918 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
RABGAP1-204ENST00000426918 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
RABGAP1-204ENST00000426918 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
RABGAP1-204ENST00000426918 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
RABGAP1-204ENST00000426918 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
RABGAP1-204ENST00000426918 DNAJC5BQ9UF47 199 aa10.97□□□□□ -0.65
RABGAP1-204ENST00000426918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.662e-7■■□□□ 13.4
RABGAP1-204ENST00000426918 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
RABGAP1-204ENST00000426918 KCNA4P22459 653 aa10.63□□□□□ -0.71
RABGAP1-204ENST00000426918 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
RABGAP1-204ENST00000426918 U3KPZ7 1027 aaPredicted RBP10.57□□□□□ -0.72
RABGAP1-204ENST00000426918 CAPN15O75808 1086 aa10.56□□□□□ -0.72
RABGAP1-204ENST00000426918 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
RABGAP1-204ENST00000426918 DSG3P32926 999 aa10.44□□□□□ -0.74
RABGAP1-204ENST00000426918 APLP2Q06481 763 aa10.4□□□□□ -0.74
RABGAP1-204ENST00000426918 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
RABGAP1-204ENST00000426918 SLC4A2P04920 1241 aa10.32□□□□□ -0.76
RABGAP1-204ENST00000426918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
RABGAP1-204ENST00000426918 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
RABGAP1-204ENST00000426918 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
RABGAP1-204ENST00000426918 ZNF219Q9P2Y4 722 aaPredicted RBP10.31□□□□□ -0.76
RABGAP1-204ENST00000426918 POTEHQ6S545 545 aa10.29□□□□□ -0.76
RABGAP1-204ENST00000426918 ABCB7O75027 752 aa10.26□□□□□ -0.77
RABGAP1-204ENST00000426918 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
RABGAP1-204ENST00000426918 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
RABGAP1-204ENST00000426918 RBM42Q9BTD8 480 aaKnown RBP10.06□□□□□ -0.8
RABGAP1-204ENST00000426918 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
RABGAP1-204ENST00000426918 POLA2Q14181 598 aa9.97□□□□□ -0.81
RABGAP1-204ENST00000426918 ZBTB22O15209 634 aa9.88□□□□□ -0.83
RABGAP1-204ENST00000426918 CHRDL2Q6WN34 429 aa9.85□□□□□ -0.83
RABGAP1-204ENST00000426918 FOXD4L1Q9NU39 408 aa9.85□□□□□ -0.83
RABGAP1-204ENST00000426918 ZBTB12Q9Y330 459 aaPredicted RBP9.82□□□□□ -0.84
RABGAP1-204ENST00000426918 AKT1S1Q96B36 256 aa9.75□□□□□ -0.85
RABGAP1-204ENST00000426918 ATF5Q9Y2D1 282 aaPredicted RBP9.74□□□□□ -0.85
RABGAP1-204ENST00000426918 OSCARQ8IYS5 282 aa9.68□□□□□ -0.86
RABGAP1-204ENST00000426918 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
RABGAP1-204ENST00000426918 SP7Q8TDD2 431 aaPredicted RBP9.57□□□□□ -0.88
RABGAP1-204ENST00000426918 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
RABGAP1-204ENST00000426918 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
RABGAP1-204ENST00000426918 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
RABGAP1-204ENST00000426918 ATXN8OSP0DMR3 200 aa9.54□□□□□ -0.88
RABGAP1-204ENST00000426918 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
RABGAP1-204ENST00000426918 PITPNM1O00562 1244 aa9.53□□□□□ -0.88
RABGAP1-204ENST00000426918 FBLN2P98095 1184 aa9.52□□□□□ -0.89
RABGAP1-204ENST00000426918 HAX1O00165 279 aa9.5□□□□□ -0.89
RABGAP1-204ENST00000426918 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
RABGAP1-204ENST00000426918 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
RABGAP1-204ENST00000426918 SPDYE2Q495Y8 402 aa9.46□□□□□ -0.9
RABGAP1-204ENST00000426918 FXR2P51116 673 aaKnown RBP eCLIP9.45□□□□□ -0.9
RABGAP1-204ENST00000426918 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
RABGAP1-204ENST00000426918 AMER1Q5JTC6 1135 aaPredicted RBP9.37□□□□□ -0.91
RABGAP1-204ENST00000426918 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
RABGAP1-204ENST00000426918 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
RABGAP1-204ENST00000426918 PRKAR2AP13861 404 aaKnown RBP9.32□□□□□ -0.92
RABGAP1-204ENST00000426918 ABCC9O60706 1549 aa9.28□□□□□ -0.92
RABGAP1-204ENST00000426918 MKRN4PQ13434 485 aaPredicted RBP9.28□□□□□ -0.92
RABGAP1-204ENST00000426918 SSUH2Q9Y2M2 353 aa9.26□□□□□ -0.93
RABGAP1-204ENST00000426918 EVX2Q03828 476 aa9.24□□□□□ -0.93
RABGAP1-204ENST00000426918 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
RABGAP1-204ENST00000426918 PABPN1Q86U42 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
RABGAP1-204ENST00000426918 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
RABGAP1-204ENST00000426918 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
RABGAP1-204ENST00000426918 FKBP8Q14318 412 aa9.14□□□□□ -0.95
RABGAP1-204ENST00000426918 GABBR2O75899 941 aa9.09□□□□□ -0.95
RABGAP1-204ENST00000426918 CD44P16070 742 aaKnown RBP9.03□□□□□ -0.96
RABGAP1-204ENST00000426918 FARP1Q9Y4F1 1045 aaPredicted RBP9□□□□□ -0.97
RABGAP1-204ENST00000426918 LHX8Q68G74 356 aa8.98□□□□□ -0.97
RABGAP1-204ENST00000426918 CLCN6P51797 869 aa8.93□□□□□ -0.98
RABGAP1-204ENST00000426918 STAG3Q9UJ98 1225 aa8.93□□□□□ -0.98
RABGAP1-204ENST00000426918 DCBLD2Q96PD2 775 aa8.9□□□□□ -0.98
RABGAP1-204ENST00000426918 ZRANB1Q9UGI0 708 aa8.88□□□□□ -0.99
RABGAP1-204ENST00000426918 SPDYE4A6NLX3 237 aa8.85□□□□□ -0.99
RABGAP1-204ENST00000426918 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
RABGAP1-204ENST00000426918 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
RABGAP1-204ENST00000426918 CREBZFQ9NS37 354 aa8.84□□□□□ -0.99
RABGAP1-204ENST00000426918 POTEIP0CG38 1075 aa8.83□□□□□ -1
RABGAP1-204ENST00000426918 CCDC180Q9P1Z9 1646 aa8.81□□□□□ -1
RABGAP1-204ENST00000426918 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
RABGAP1-204ENST00000426918 GALR2O43603 387 aaPredicted RBP8.74□□□□□ -1.01
RABGAP1-204ENST00000426918 PHF12Q96QT6 1004 aa8.71□□□□□ -1.02
RABGAP1-204ENST00000426918 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
RABGAP1-204ENST00000426918 DNAJC5Q9H3Z4 198 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms