RNA–Protein interactions for RNA: ENST00000571578.1

MMD-202, Transcript of monocyte to macrophage differentiation associated, humanhuman

TSL 3

Gene MMD, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMD-202ENST00000571578 NISCHQ9Y2I1 1504 aa42.9■■■■■ 4.46
MMD-202ENST00000571578 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
MMD-202ENST00000571578 ABCC9O60706 1549 aa37.61■■■■□ 3.61
MMD-202ENST00000571578 RB1CC1Q8TDY2 1594 aa36.23■■■■□ 3.39
MMD-202ENST00000571578 NACADO15069 1562 aa36.13■■■■□ 3.37
MMD-202ENST00000571578 MYO15BQ96JP2 1530 aa35.91■■■■□ 3.34
MMD-202ENST00000571578 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
MMD-202ENST00000571578 DCAF1Q9Y4B6 1507 aa35.62■■■■□ 3.29
MMD-202ENST00000571578 DCAF8L2P0C7V8 631 aa35.61■■■■□ 3.29
MMD-202ENST00000571578 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
MMD-202ENST00000571578 BICRAQ9NZM4 1560 aa35.1■■■■□ 3.21
MMD-202ENST00000571578 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
MMD-202ENST00000571578 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
MMD-202ENST00000571578 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
MMD-202ENST00000571578 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
MMD-202ENST00000571578 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
MMD-202ENST00000571578 CC2D2AQ9P2K1 1620 aa34.12■■■■□ 3.05
MMD-202ENST00000571578 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
MMD-202ENST00000571578 SMARCA4P51532 1647 aa33.39■■■□□ 2.93
MMD-202ENST00000571578 BAZ1AQ9NRL2 1556 aaPredicted RBP33.32■■■□□ 2.92
MMD-202ENST00000571578 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
MMD-202ENST00000571578 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
MMD-202ENST00000571578 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
MMD-202ENST00000571578 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
MMD-202ENST00000571578 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
MMD-202ENST00000571578 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
MMD-202ENST00000571578 BAZ1BQ9UIG0 1483 aaKnown RBP32.94■■■□□ 2.86
MMD-202ENST00000571578 WIZO95785 1651 aa32.63■■■□□ 2.81
MMD-202ENST00000571578 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
MMD-202ENST00000571578 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
MMD-202ENST00000571578 ERCC6Q03468 1493 aa32.49■■■□□ 2.79
MMD-202ENST00000571578 NESP48681 1621 aa32.47■■■□□ 2.79
MMD-202ENST00000571578 CUX2O14529 1486 aa32.39■■■□□ 2.78
MMD-202ENST00000571578 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
MMD-202ENST00000571578 CADPSQ9ULU8 1353 aa32.25■■■□□ 2.75
MMD-202ENST00000571578 PDS5BQ9NTI5 1447 aa32.23■■■□□ 2.75
MMD-202ENST00000571578 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
MMD-202ENST00000571578 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
MMD-202ENST00000571578 CFTRP13569 1480 aa32.05■■■□□ 2.72
MMD-202ENST00000571578 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
MMD-202ENST00000571578 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
MMD-202ENST00000571578 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
MMD-202ENST00000571578 WDR62O43379 1518 aa31.9■■■□□ 2.7
MMD-202ENST00000571578 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
MMD-202ENST00000571578 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
MMD-202ENST00000571578 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
MMD-202ENST00000571578 DNAJC5Q9H3Z4 198 aa31.57■■■□□ 2.64
MMD-202ENST00000571578 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
MMD-202ENST00000571578 TOPBP1Q92547 1522 aa31.36■■■□□ 2.61
MMD-202ENST00000571578 DNMBPQ6XZF7 1577 aa31.35■■■□□ 2.61
MMD-202ENST00000571578 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
MMD-202ENST00000571578 SUPT5HO00267 1087 aaKnown RBP31.22■■■□□ 2.59
MMD-202ENST00000571578 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
MMD-202ENST00000571578 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
MMD-202ENST00000571578 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
MMD-202ENST00000571578 EIF4G3O43432 1585 aaKnown RBP31.04■■■□□ 2.56
MMD-202ENST00000571578 CUX1P39880 1505 aa30.99■■■□□ 2.55
MMD-202ENST00000571578 WDR97A6NE52 1622 aa30.97■■■□□ 2.55
MMD-202ENST00000571578 FGD5Q6ZNL6 1462 aa30.94■■■□□ 2.54
MMD-202ENST00000571578 SOGA1O94964 1423 aa30.86■■■□□ 2.53
MMD-202ENST00000571578 RAD54L2Q9Y4B4 1467 aa30.85■■■□□ 2.53
MMD-202ENST00000571578 OSCARQ8IYS5 282 aa30.8■■■□□ 2.52
MMD-202ENST00000571578 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.522e-6■■■□□ 18.9
MMD-202ENST00000571578 BIVM-ERCC5R4GMW8 1640 aa30.75■■■□□ 2.51
MMD-202ENST00000571578 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
MMD-202ENST00000571578 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
MMD-202ENST00000571578 CHD1O14646 1710 aa30.68■■■□□ 2.5
MMD-202ENST00000571578 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
MMD-202ENST00000571578 TDRD9Q8NDG6 1382 aaKnown RBP30.67■■■□□ 2.5
MMD-202ENST00000571578 SYNJ1O43426 1573 aa30.63■■■□□ 2.49
MMD-202ENST00000571578 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
MMD-202ENST00000571578 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
MMD-202ENST00000571578 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
MMD-202ENST00000571578 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
MMD-202ENST00000571578 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
MMD-202ENST00000571578 GAPVD1Q14C86 1478 aa30.56■■■□□ 2.48
MMD-202ENST00000571578 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
MMD-202ENST00000571578 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
MMD-202ENST00000571578 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
MMD-202ENST00000571578 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
MMD-202ENST00000571578 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
MMD-202ENST00000571578 CLASP1Q7Z460 1538 aa30.38■■■□□ 2.45
MMD-202ENST00000571578 FBLN2P98095 1184 aa30.37■■■□□ 2.45
MMD-202ENST00000571578 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
MMD-202ENST00000571578 ERICH3Q5RHP9 1530 aa30.34■■■□□ 2.45
MMD-202ENST00000571578 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
MMD-202ENST00000571578 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
MMD-202ENST00000571578 GRIN2AQ12879 1464 aa30.24■■■□□ 2.43
MMD-202ENST00000571578 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
MMD-202ENST00000571578 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
MMD-202ENST00000571578 NUP160Q12769 1436 aa30.14■■■□□ 2.42
MMD-202ENST00000571578 CEP170Q5SW79 1584 aa30.1■■■□□ 2.41
MMD-202ENST00000571578 KIF27Q86VH2 1401 aa30.06■■■□□ 2.4
MMD-202ENST00000571578 CUL7Q14999 1698 aa30.04■■■□□ 2.4
MMD-202ENST00000571578 SHROOM2Q13796 1616 aa30■■■□□ 2.39
MMD-202ENST00000571578 CYB5RLQ6IPT4 315 aa29.95■■■□□ 2.39
MMD-202ENST00000571578 RUSC2Q8N2Y8 1516 aa29.91■■■□□ 2.38
MMD-202ENST00000571578 IGF1RP08069 1367 aa29.91■■■□□ 2.38
MMD-202ENST00000571578 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
MMD-202ENST00000571578 KIAA0586Q9BVV6 1533 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms