RNA–Protein interactions for RNA: ENST00000611716.4

PCSK6-214, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCSK6, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-214ENST00000611716 NISCHQ9Y2I1 1504 aa34.3■■■■□ 3.08
PCSK6-214ENST00000611716 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
PCSK6-214ENST00000611716 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
PCSK6-214ENST00000611716 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
PCSK6-214ENST00000611716 PCGF6Q9BYE7 350 aa32.43■■■□□ 2.78
PCSK6-214ENST00000611716 HRCP23327 699 aa31.87■■■□□ 2.69
PCSK6-214ENST00000611716 EHMT2Q96KQ7 1210 aa31.64■■■□□ 2.66
PCSK6-214ENST00000611716 PPARGC1BQ86YN6 1023 aaKnown RBP31.63■■■□□ 2.65
PCSK6-214ENST00000611716 PELP1Q8IZL8 1130 aaKnown RBP31.61■■■□□ 2.65
PCSK6-214ENST00000611716 FAM9AQ8IZU1 332 aaPredicted RBP31.05■■■□□ 2.56
PCSK6-214ENST00000611716 ZEB1P37275 1124 aaPredicted RBP30.95■■■□□ 2.54
PCSK6-214ENST00000611716 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
PCSK6-214ENST00000611716 LOC105371045A0A1W2PR82 267 aa30.84■■■□□ 2.53
PCSK6-214ENST00000611716 CENPBP07199 599 aaPredicted RBP30.78■■■□□ 2.52
PCSK6-214ENST00000611716 TRIM26Q12899 539 aaPredicted RBP30.76■■■□□ 2.52
PCSK6-214ENST00000611716 TTBK1Q5TCY1 1321 aaPredicted RBP30.74■■■□□ 2.51
PCSK6-214ENST00000611716 MYT1Q01538 1121 aa30.64■■■□□ 2.5
PCSK6-214ENST00000611716 CCER1Q8TC90 406 aaPredicted RBP30.61■■■□□ 2.49
PCSK6-214ENST00000611716 YTHDC1Q96MU7 727 aaKnown RBP30.5■■■□□ 2.47
PCSK6-214ENST00000611716 TRIM41Q8WV44 630 aa30.34■■■□□ 2.45
PCSK6-214ENST00000611716 GTF3C3Q9Y5Q9 886 aa30.05■■■□□ 2.4
PCSK6-214ENST00000611716 SCAF1Q9H7N4 1312 aaKnown RBP29.98■■■□□ 2.39
PCSK6-214ENST00000611716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
PCSK6-214ENST00000611716 DIEXFQ68CQ4 756 aaKnown RBP29.87■■■□□ 2.37
PCSK6-214ENST00000611716 ACIN1Q9UKV3 1341 aaKnown RBP29.79■■■□□ 2.36
PCSK6-214ENST00000611716 ABCC9O60706 1549 aa29.79■■■□□ 2.36
PCSK6-214ENST00000611716 APLP2Q06481 763 aa29.7■■■□□ 2.34
PCSK6-214ENST00000611716 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
PCSK6-214ENST00000611716 NEUROD1Q13562 356 aa29.57■■■□□ 2.32
PCSK6-214ENST00000611716 RANGAP1P46060 587 aaPredicted RBP29.56■■■□□ 2.32
PCSK6-214ENST00000611716 UBTFP17480 764 aaKnown RBP29.44■■■□□ 2.3
PCSK6-214ENST00000611716 ERICH6Q7L0X2 663 aa29.43■■■□□ 2.3
PCSK6-214ENST00000611716 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
PCSK6-214ENST00000611716 HNRNPUL2Q1KMD3 747 aaKnown RBP29.28■■■□□ 2.28
PCSK6-214ENST00000611716 NEFLP07196 543 aa29.17■■■□□ 2.26
PCSK6-214ENST00000611716 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
PCSK6-214ENST00000611716 ZNF316A6NFI3 1004 aaPredicted RBP29.04■■■□□ 2.24
PCSK6-214ENST00000611716 BCANQ96GW7 911 aa28.98■■■□□ 2.23
PCSK6-214ENST00000611716 ITGAEP38570 1179 aa28.75■■■□□ 2.19
PCSK6-214ENST00000611716 MIER1Q8N108 512 aa28.65■■■□□ 2.18
PCSK6-214ENST00000611716 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
PCSK6-214ENST00000611716 ATP1B4Q9UN42 357 aaPredicted RBP28.54■■■□□ 2.16
PCSK6-214ENST00000611716 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
PCSK6-214ENST00000611716 FKBP8Q14318 412 aa28.28■■■□□ 2.12
PCSK6-214ENST00000611716 ANP32EQ9BTT0 268 aa28.19■■■□□ 2.1
PCSK6-214ENST00000611716 CNGB1Q14028 1251 aaPredicted RBP28.19■■■□□ 2.1
PCSK6-214ENST00000611716 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
PCSK6-214ENST00000611716 BCL11AQ9H165 835 aa28.07■■■□□ 2.08
PCSK6-214ENST00000611716 CDK11AQ9UQ88 783 aaPredicted RBP28.07■■■□□ 2.08
PCSK6-214ENST00000611716 CLSPNQ9HAW4 1339 aa28.06■■■□□ 2.08
PCSK6-214ENST00000611716 RTL5Q5HYW3 569 aaPredicted RBP28.02■■■□□ 2.08
PCSK6-214ENST00000611716 SUPT16HQ9Y5B9 1047 aaKnown RBP28■■■□□ 2.07
PCSK6-214ENST00000611716 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
PCSK6-214ENST00000611716 ANP32CO43423 234 aa27.94■■■□□ 2.06
PCSK6-214ENST00000611716 TRIM52Q96A61 297 aa27.92■■■□□ 2.06
PCSK6-214ENST00000611716 POLR3GLQ9BT43 218 aa27.91■■■□□ 2.06
PCSK6-214ENST00000611716 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
PCSK6-214ENST00000611716 DDX10Q13206 875 aaKnown RBP27.9■■■□□ 2.06
PCSK6-214ENST00000611716 FAM50AQ14320 339 aaKnown RBP27.82■■■□□ 2.04
PCSK6-214ENST00000611716 IRX6P78412 446 aaPredicted RBP27.74■■■□□ 2.03
PCSK6-214ENST00000611716 NACADO15069 1562 aa27.71■■■□□ 2.03
PCSK6-214ENST00000611716 TSHZ2Q9NRE2 1034 aa27.7■■■□□ 2.02
PCSK6-214ENST00000611716 NBR1Q14596 966 aa27.69■■■□□ 2.02
PCSK6-214ENST00000611716 DAXXQ9UER7 740 aaPredicted RBP27.69■■■□□ 2.02
PCSK6-214ENST00000611716 HIRIP3Q9BW71 556 aaPredicted RBP27.67■■■□□ 2.02
PCSK6-214ENST00000611716 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
PCSK6-214ENST00000611716 HNRNPUQ00839 825 aaKnown RBP eCLIP27.61■■■□□ 2.01
PCSK6-214ENST00000611716 CEP162Q5TB80 1403 aa27.58■■■□□ 2.01
PCSK6-214ENST00000611716 RBM19Q9Y4C8 960 aaKnown RBP27.49■■□□□ 1.99
PCSK6-214ENST00000611716 NPM2Q86SE8 214 aaKnown RBP27.46■■□□□ 1.99
PCSK6-214ENST00000611716 FBLN2P98095 1184 aa27.45■■□□□ 1.98
PCSK6-214ENST00000611716 ANP32AP39687 249 aaKnown RBP27.44■■□□□ 1.98
PCSK6-214ENST00000611716 EIF5BO60841 1220 aaKnown RBP27.42■■□□□ 1.98
PCSK6-214ENST00000611716 FAM9BQ8IZU0 186 aa27.34■■□□□ 1.97
PCSK6-214ENST00000611716 MYT1LQ9UL68 1186 aa27.3■■□□□ 1.96
PCSK6-214ENST00000611716 CLIP1P30622 1438 aa27.25■■□□□ 1.95
PCSK6-214ENST00000611716 KCNH8Q96L42 1107 aa27.24■■□□□ 1.95
PCSK6-214ENST00000611716 P3H3Q8IVL6 736 aa27.23■■□□□ 1.95
PCSK6-214ENST00000611716 TNIKQ9UKE5 1360 aa27.21■■□□□ 1.95
PCSK6-214ENST00000611716 ZBTB47Q9UFB7 747 aaPredicted RBP27.2■■□□□ 1.94
PCSK6-214ENST00000611716 RTN4Q9NQC3 1192 aaKnown RBP27.18■■□□□ 1.94
PCSK6-214ENST00000611716 DEKP35659 375 aaKnown RBP27.14■■□□□ 1.94
PCSK6-214ENST00000611716 ZNF326Q5BKZ1 582 aaKnown RBP27.14■■□□□ 1.94
PCSK6-214ENST00000611716 TONSLQ96HA7 1378 aa27.12■■□□□ 1.93
PCSK6-214ENST00000611716 CCDC136Q96JN2 1154 aa27.12■■□□□ 1.93
PCSK6-214ENST00000611716 SENP3-EIF4A1A0A087X0R7 540 aa27.09■■□□□ 1.93
PCSK6-214ENST00000611716 SIN3AQ96ST3 1273 aa27.09■■□□□ 1.93
PCSK6-214ENST00000611716 SOGA1O94964 1423 aa27.05■■□□□ 1.92
PCSK6-214ENST00000611716 B4GALNT3Q6L9W6 998 aa27.02■■□□□ 1.92
PCSK6-214ENST00000611716 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
PCSK6-214ENST00000611716 MRS2Q9HD23 443 aa27.01■■□□□ 1.91
PCSK6-214ENST00000611716 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
PCSK6-214ENST00000611716 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
PCSK6-214ENST00000611716 SALL2Q9Y467 1007 aaPredicted RBP26.98■■□□□ 1.91
PCSK6-214ENST00000611716 NOP58Q9Y2X3 529 aaKnown RBP26.93■■□□□ 1.9
PCSK6-214ENST00000611716 PPP4R2Q9NY27 417 aa26.88■■□□□ 1.89
PCSK6-214ENST00000611716 BAZ1AQ9NRL2 1556 aaPredicted RBP26.87■■□□□ 1.89
PCSK6-214ENST00000611716 EEA1Q15075 1411 aa26.84■■□□□ 1.89
PCSK6-214ENST00000611716 ARID3CA6NKF2 412 aa26.83■■□□□ 1.88
PCSK6-214ENST00000611716 LAS1LQ9Y4W2 734 aaKnown RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms