RNA–Protein interactions for RNA: ENST00000398185.6

PCSK6-202, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best)

Gene PCSK6, Length 3,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-202ENST00000398185 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
PCSK6-202ENST00000398185 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
PCSK6-202ENST00000398185 ABCC9O60706 1549 aa17.06■□□□□ 0.32
PCSK6-202ENST00000398185 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
PCSK6-202ENST00000398185 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCSK6-202ENST00000398185 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
PCSK6-202ENST00000398185 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
PCSK6-202ENST00000398185 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
PCSK6-202ENST00000398185 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.12
PCSK6-202ENST00000398185 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
PCSK6-202ENST00000398185 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
PCSK6-202ENST00000398185 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
PCSK6-202ENST00000398185 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
PCSK6-202ENST00000398185 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
PCSK6-202ENST00000398185 NACADO15069 1562 aa15.39■□□□□ 0.05
PCSK6-202ENST00000398185 RANGAP1P46060 587 aaPredicted RBP15.38■□□□□ 0.05
PCSK6-202ENST00000398185 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
PCSK6-202ENST00000398185 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
PCSK6-202ENST00000398185 FBLN2P98095 1184 aa15.14■□□□□ 0.01
PCSK6-202ENST00000398185 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
PCSK6-202ENST00000398185 TRIM41Q8WV44 630 aa15.07■□□□□ 0
PCSK6-202ENST00000398185 CHIC1Q5VXU3 224 aa15.02□□□□□ -0.01
PCSK6-202ENST00000398185 RSF1Q96T23 1441 aaPredicted RBP15.02□□□□□ -0.01
PCSK6-202ENST00000398185 ATP1B4Q9UN42 357 aaPredicted RBP14.96□□□□□ -0.01
PCSK6-202ENST00000398185 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
PCSK6-202ENST00000398185 ERCC6Q03468 1493 aa14.85□□□□□ -0.03
PCSK6-202ENST00000398185 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
PCSK6-202ENST00000398185 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
PCSK6-202ENST00000398185 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
PCSK6-202ENST00000398185 WIZO95785 1651 aa14.71□□□□□ -0.06
PCSK6-202ENST00000398185 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
PCSK6-202ENST00000398185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
PCSK6-202ENST00000398185 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
PCSK6-202ENST00000398185 BICRAQ9NZM4 1560 aa14.69□□□□□ -0.06
PCSK6-202ENST00000398185 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
PCSK6-202ENST00000398185 LOC105371045A0A1W2PR82 267 aa14.68□□□□□ -0.06
PCSK6-202ENST00000398185 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
PCSK6-202ENST00000398185 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
PCSK6-202ENST00000398185 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
PCSK6-202ENST00000398185 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
PCSK6-202ENST00000398185 PPARGC1BQ86YN6 1023 aaKnown RBP14.62□□□□□ -0.07
PCSK6-202ENST00000398185 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
PCSK6-202ENST00000398185 NESP48681 1621 aa14.56□□□□□ -0.08
PCSK6-202ENST00000398185 CHMP7Q8WUX9 453 aaPredicted RBP14.54□□□□□ -0.08
PCSK6-202ENST00000398185 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
PCSK6-202ENST00000398185 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
PCSK6-202ENST00000398185 SMARCA2P51531 1590 aa14.46□□□□□ -0.09
PCSK6-202ENST00000398185 APLP2Q06481 763 aa14.46□□□□□ -0.09
PCSK6-202ENST00000398185 MYT1LQ9UL68 1186 aa14.44□□□□□ -0.1
PCSK6-202ENST00000398185 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
PCSK6-202ENST00000398185 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
PCSK6-202ENST00000398185 PDS5BQ9NTI5 1447 aa14.4□□□□□ -0.1
PCSK6-202ENST00000398185 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
PCSK6-202ENST00000398185 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
PCSK6-202ENST00000398185 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
PCSK6-202ENST00000398185 PCGF6Q9BYE7 350 aa14.32□□□□□ -0.12
PCSK6-202ENST00000398185 CYB5RLQ6IPT4 315 aa14.3□□□□□ -0.12
PCSK6-202ENST00000398185 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
PCSK6-202ENST00000398185 WRNQ14191 1432 aaPredicted RBP eCLIP14.29□□□□□ -0.12
PCSK6-202ENST00000398185 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.13
PCSK6-202ENST00000398185 ITGAEP38570 1179 aa14.27□□□□□ -0.13
PCSK6-202ENST00000398185 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
PCSK6-202ENST00000398185 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
PCSK6-202ENST00000398185 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
PCSK6-202ENST00000398185 SOGA1O94964 1423 aa14.2□□□□□ -0.14
PCSK6-202ENST00000398185 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
PCSK6-202ENST00000398185 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
PCSK6-202ENST00000398185 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
PCSK6-202ENST00000398185 AQRO60306 1485 aaKnown RBP eCLIP14.14□□□□□ -0.156e-7■■□□□ 11.6
PCSK6-202ENST00000398185 RAD54L2Q9Y4B4 1467 aa14.14□□□□□ -0.15
PCSK6-202ENST00000398185 CUX2O14529 1486 aa14.14□□□□□ -0.15
PCSK6-202ENST00000398185 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
PCSK6-202ENST00000398185 ZNF777Q9ULD5 760 aaPredicted RBP14.09□□□□□ -0.15
PCSK6-202ENST00000398185 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
PCSK6-202ENST00000398185 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
PCSK6-202ENST00000398185 EEA1Q15075 1411 aa14.03□□□□□ -0.16
PCSK6-202ENST00000398185 CFTRP13569 1480 aa14.01□□□□□ -0.17
PCSK6-202ENST00000398185 KIF27Q86VH2 1401 aa13.97□□□□□ -0.17
PCSK6-202ENST00000398185 SYNJ1O43426 1573 aa13.96□□□□□ -0.17
PCSK6-202ENST00000398185 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
PCSK6-202ENST00000398185 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
PCSK6-202ENST00000398185 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
PCSK6-202ENST00000398185 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
PCSK6-202ENST00000398185 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
PCSK6-202ENST00000398185 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
PCSK6-202ENST00000398185 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
PCSK6-202ENST00000398185 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
PCSK6-202ENST00000398185 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
PCSK6-202ENST00000398185 TNIKQ9UKE5 1360 aa13.89□□□□□ -0.19
PCSK6-202ENST00000398185 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
PCSK6-202ENST00000398185 CLIP1P30622 1438 aa13.85□□□□□ -0.19
PCSK6-202ENST00000398185 CUX1P39880 1505 aa13.85□□□□□ -0.19
PCSK6-202ENST00000398185 GAPVD1Q14C86 1478 aa13.83□□□□□ -0.2
PCSK6-202ENST00000398185 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
PCSK6-202ENST00000398185 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
PCSK6-202ENST00000398185 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
PCSK6-202ENST00000398185 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
PCSK6-202ENST00000398185 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
PCSK6-202ENST00000398185 MLECQ14165 292 aa13.8□□□□□ -0.2
PCSK6-202ENST00000398185 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms