RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 NISCHQ9Y2I1 1504 aa36.05■■■■□ 3.36
PCSK6-217ENST00000618548 SUPT5HO00267 1087 aaKnown RBP34.49■■■■□ 3.11
PCSK6-217ENST00000618548 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
PCSK6-217ENST00000618548 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
PCSK6-217ENST00000618548 PCGF6Q9BYE7 350 aa33.48■■■□□ 2.95
PCSK6-217ENST00000618548 HRCP23327 699 aa32.92■■■□□ 2.86
PCSK6-217ENST00000618548 EHMT2Q96KQ7 1210 aa32.71■■■□□ 2.83
PCSK6-217ENST00000618548 PPARGC1BQ86YN6 1023 aaKnown RBP32.49■■■□□ 2.79
PCSK6-217ENST00000618548 PELP1Q8IZL8 1130 aaKnown RBP32.38■■■□□ 2.77
PCSK6-217ENST00000618548 FAM9AQ8IZU1 332 aaPredicted RBP32.27■■■□□ 2.76
PCSK6-217ENST00000618548 CHIC1Q5VXU3 224 aa32.23■■■□□ 2.75
PCSK6-217ENST00000618548 ZEB1P37275 1124 aaPredicted RBP32.16■■■□□ 2.74
PCSK6-217ENST00000618548 LOC105371045A0A1W2PR82 267 aa32.03■■■□□ 2.72
PCSK6-217ENST00000618548 TRIM26Q12899 539 aaPredicted RBP31.99■■■□□ 2.71
PCSK6-217ENST00000618548 TTBK1Q5TCY1 1321 aaPredicted RBP31.77■■■□□ 2.68
PCSK6-217ENST00000618548 CENPBP07199 599 aaPredicted RBP31.77■■■□□ 2.68
PCSK6-217ENST00000618548 TRIM41Q8WV44 630 aa31.74■■■□□ 2.67
PCSK6-217ENST00000618548 CCER1Q8TC90 406 aaPredicted RBP31.72■■■□□ 2.67
PCSK6-217ENST00000618548 MYT1Q01538 1121 aa31.36■■■□□ 2.61
PCSK6-217ENST00000618548 YTHDC1Q96MU7 727 aaKnown RBP31.32■■■□□ 2.61
PCSK6-217ENST00000618548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.02■■■□□ 2.56
PCSK6-217ENST00000618548 APLP2Q06481 763 aa31.02■■■□□ 2.56
PCSK6-217ENST00000618548 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
PCSK6-217ENST00000618548 DIEXFQ68CQ4 756 aaKnown RBP30.88■■■□□ 2.53
PCSK6-217ENST00000618548 GTF3C3Q9Y5Q9 886 aa30.86■■■□□ 2.53
PCSK6-217ENST00000618548 UBTFP17480 764 aaKnown RBP30.76■■■□□ 2.52
PCSK6-217ENST00000618548 SCAF1Q9H7N4 1312 aaKnown RBP30.74■■■□□ 2.51
PCSK6-217ENST00000618548 RANGAP1P46060 587 aaPredicted RBP30.72■■■□□ 2.51
PCSK6-217ENST00000618548 DCAF1Q9Y4B6 1507 aa30.71■■■□□ 2.51
PCSK6-217ENST00000618548 ACIN1Q9UKV3 1341 aaKnown RBP30.69■■■□□ 2.5
PCSK6-217ENST00000618548 NEUROD1Q13562 356 aa30.41■■■□□ 2.46
PCSK6-217ENST00000618548 HNRNPUL2Q1KMD3 747 aaKnown RBP30.41■■■□□ 2.46
PCSK6-217ENST00000618548 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
PCSK6-217ENST00000618548 ERICH6Q7L0X2 663 aa30.21■■■□□ 2.43
PCSK6-217ENST00000618548 NEFLP07196 543 aa30.15■■■□□ 2.42
PCSK6-217ENST00000618548 ZNF316A6NFI3 1004 aaPredicted RBP30.14■■■□□ 2.42
PCSK6-217ENST00000618548 CCDC180Q9P1Z9 1646 aa29.88■■■□□ 2.37
PCSK6-217ENST00000618548 ITGAEP38570 1179 aa29.87■■■□□ 2.37
PCSK6-217ENST00000618548 ATP1B4Q9UN42 357 aaPredicted RBP29.77■■■□□ 2.36
PCSK6-217ENST00000618548 BCANQ96GW7 911 aa29.76■■■□□ 2.35
PCSK6-217ENST00000618548 MIER1Q8N108 512 aa29.61■■■□□ 2.33
PCSK6-217ENST00000618548 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
PCSK6-217ENST00000618548 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
PCSK6-217ENST00000618548 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
PCSK6-217ENST00000618548 CLSPNQ9HAW4 1339 aa29.17■■■□□ 2.26
PCSK6-217ENST00000618548 FKBP8Q14318 412 aa29.17■■■□□ 2.26
PCSK6-217ENST00000618548 CNGB1Q14028 1251 aaPredicted RBP29.06■■■□□ 2.24
PCSK6-217ENST00000618548 FAM50AQ14320 339 aaKnown RBP29.04■■■□□ 2.24
PCSK6-217ENST00000618548 ANP32CO43423 234 aa29.04■■■□□ 2.24
PCSK6-217ENST00000618548 ABCC9O60706 1549 aa29.01■■■□□ 2.24
PCSK6-217ENST00000618548 CDK11AQ9UQ88 783 aaPredicted RBP28.98■■■□□ 2.23
PCSK6-217ENST00000618548 CEP162Q5TB80 1403 aa28.95■■■□□ 2.23
PCSK6-217ENST00000618548 DDX10Q13206 875 aaKnown RBP28.93■■■□□ 2.22
PCSK6-217ENST00000618548 POLR3GLQ9BT43 218 aa28.92■■■□□ 2.22
PCSK6-217ENST00000618548 ANP32EQ9BTT0 268 aa28.91■■■□□ 2.22
PCSK6-217ENST00000618548 SUPT16HQ9Y5B9 1047 aaKnown RBP28.87■■■□□ 2.21
PCSK6-217ENST00000618548 TRIM52Q96A61 297 aa28.84■■■□□ 2.21
PCSK6-217ENST00000618548 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
PCSK6-217ENST00000618548 RTL5Q5HYW3 569 aaPredicted RBP28.82■■■□□ 2.2
PCSK6-217ENST00000618548 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
PCSK6-217ENST00000618548 TNIKQ9UKE5 1360 aa28.66■■■□□ 2.18
PCSK6-217ENST00000618548 CLIP1P30622 1438 aa28.64■■■□□ 2.18
PCSK6-217ENST00000618548 HIRIP3Q9BW71 556 aaPredicted RBP28.64■■■□□ 2.17
PCSK6-217ENST00000618548 HNRNPUQ00839 825 aaKnown RBP eCLIP28.6■■■□□ 2.17
PCSK6-217ENST00000618548 DAXXQ9UER7 740 aaPredicted RBP28.57■■■□□ 2.16
PCSK6-217ENST00000618548 IRX6P78412 446 aaPredicted RBP28.55■■■□□ 2.16
PCSK6-217ENST00000618548 BCL11AQ9H165 835 aa28.54■■■□□ 2.16
PCSK6-217ENST00000618548 TSHZ2Q9NRE2 1034 aa28.49■■■□□ 2.15
PCSK6-217ENST00000618548 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
PCSK6-217ENST00000618548 P3H3Q8IVL6 736 aa28.49■■■□□ 2.15
PCSK6-217ENST00000618548 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
PCSK6-217ENST00000618548 SOGA1O94964 1423 aa28.45■■■□□ 2.14
PCSK6-217ENST00000618548 EEA1Q15075 1411 aa28.43■■■□□ 2.14
PCSK6-217ENST00000618548 NBR1Q14596 966 aa28.37■■■□□ 2.13
PCSK6-217ENST00000618548 TONSLQ96HA7 1378 aa28.33■■■□□ 2.13
PCSK6-217ENST00000618548 ANP32AP39687 249 aaKnown RBP28.32■■■□□ 2.12
PCSK6-217ENST00000618548 FAM9BQ8IZU0 186 aa28.32■■■□□ 2.12
PCSK6-217ENST00000618548 RBM19Q9Y4C8 960 aaKnown RBP28.3■■■□□ 2.12
PCSK6-217ENST00000618548 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
PCSK6-217ENST00000618548 NPM2Q86SE8 214 aaKnown RBP28.24■■■□□ 2.11
PCSK6-217ENST00000618548 ZNF326Q5BKZ1 582 aaKnown RBP28.22■■■□□ 2.11
PCSK6-217ENST00000618548 MYT1LQ9UL68 1186 aa28.2■■■□□ 2.11
PCSK6-217ENST00000618548 SIN3AQ96ST3 1273 aa28.2■■■□□ 2.1
PCSK6-217ENST00000618548 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.1
PCSK6-217ENST00000618548 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
PCSK6-217ENST00000618548 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
PCSK6-217ENST00000618548 CEP164Q9UPV0 1460 aa28.17■■■□□ 2.1
PCSK6-217ENST00000618548 KCNH8Q96L42 1107 aa28.14■■■□□ 2.1
PCSK6-217ENST00000618548 CCDC136Q96JN2 1154 aa28.06■■■□□ 2.08
PCSK6-217ENST00000618548 MRS2Q9HD23 443 aa28.06■■■□□ 2.08
PCSK6-217ENST00000618548 ZBTB47Q9UFB7 747 aaPredicted RBP28.05■■■□□ 2.08
PCSK6-217ENST00000618548 VPS8Q8N3P4 1428 aa28.03■■■□□ 2.08
PCSK6-217ENST00000618548 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.07
PCSK6-217ENST00000618548 EIF5BO60841 1220 aaKnown RBP27.92■■■□□ 2.06
PCSK6-217ENST00000618548 ARID3CA6NKF2 412 aa27.92■■■□□ 2.06
PCSK6-217ENST00000618548 CCNB3Q8WWL7 1395 aa27.92■■■□□ 2.06
PCSK6-217ENST00000618548 CHIC2Q9UKJ5 165 aa27.91■■■□□ 2.06
PCSK6-217ENST00000618548 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.06
PCSK6-217ENST00000618548 WIZO95785 1651 aa27.89■■■□□ 2.06
PCSK6-217ENST00000618548 SENP3-EIF4A1A0A087X0R7 540 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms