RNA–Protein interactions for RNA: ENST00000455098.2

PDE3B-202, Transcript of phosphodiesterase 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE3B, Length 3,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-202ENST00000455098 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
PDE3B-202ENST00000455098 DCAF8L2P0C7V8 631 aa27.43■■□□□ 1.98
PDE3B-202ENST00000455098 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
PDE3B-202ENST00000455098 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
PDE3B-202ENST00000455098 ABCC9O60706 1549 aa25.39■■□□□ 1.65
PDE3B-202ENST00000455098 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
PDE3B-202ENST00000455098 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
PDE3B-202ENST00000455098 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
PDE3B-202ENST00000455098 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.57
PDE3B-202ENST00000455098 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
PDE3B-202ENST00000455098 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
PDE3B-202ENST00000455098 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
PDE3B-202ENST00000455098 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
PDE3B-202ENST00000455098 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
PDE3B-202ENST00000455098 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
PDE3B-202ENST00000455098 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
PDE3B-202ENST00000455098 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
PDE3B-202ENST00000455098 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
PDE3B-202ENST00000455098 HRCP23327 699 aa23.92■■□□□ 1.42
PDE3B-202ENST00000455098 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
PDE3B-202ENST00000455098 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
PDE3B-202ENST00000455098 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
PDE3B-202ENST00000455098 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
PDE3B-202ENST00000455098 RB1CC1Q8TDY2 1594 aa23.68■■□□□ 1.38
PDE3B-202ENST00000455098 TRIM26Q12899 539 aaPredicted RBP23.64■■□□□ 1.38
PDE3B-202ENST00000455098 NACADO15069 1562 aa23.63■■□□□ 1.37
PDE3B-202ENST00000455098 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
PDE3B-202ENST00000455098 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
PDE3B-202ENST00000455098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
PDE3B-202ENST00000455098 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
PDE3B-202ENST00000455098 WIZO95785 1651 aa23.22■■□□□ 1.31
PDE3B-202ENST00000455098 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
PDE3B-202ENST00000455098 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
PDE3B-202ENST00000455098 APLP2Q06481 763 aa22.97■■□□□ 1.27
PDE3B-202ENST00000455098 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
PDE3B-202ENST00000455098 SOGA1O94964 1423 aa22.9■■□□□ 1.26
PDE3B-202ENST00000455098 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.26
PDE3B-202ENST00000455098 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
PDE3B-202ENST00000455098 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
PDE3B-202ENST00000455098 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
PDE3B-202ENST00000455098 ITGAEP38570 1179 aa22.81■■□□□ 1.24
PDE3B-202ENST00000455098 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
PDE3B-202ENST00000455098 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
PDE3B-202ENST00000455098 YTHDC1Q96MU7 727 aaKnown RBP22.7■■□□□ 1.22
PDE3B-202ENST00000455098 CEP162Q5TB80 1403 aa22.62■■□□□ 1.21
PDE3B-202ENST00000455098 SMARCA4P51532 1647 aa22.59■■□□□ 1.21
PDE3B-202ENST00000455098 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
PDE3B-202ENST00000455098 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
PDE3B-202ENST00000455098 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
PDE3B-202ENST00000455098 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
PDE3B-202ENST00000455098 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
PDE3B-202ENST00000455098 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
PDE3B-202ENST00000455098 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
PDE3B-202ENST00000455098 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
PDE3B-202ENST00000455098 DIEXFQ68CQ4 756 aaKnown RBP22.47■■□□□ 1.19
PDE3B-202ENST00000455098 FBLN2P98095 1184 aa22.43■■□□□ 1.18
PDE3B-202ENST00000455098 TNIKQ9UKE5 1360 aa22.34■■□□□ 1.17
PDE3B-202ENST00000455098 CLIP1P30622 1438 aa22.33■■□□□ 1.17
PDE3B-202ENST00000455098 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
PDE3B-202ENST00000455098 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
PDE3B-202ENST00000455098 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
PDE3B-202ENST00000455098 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
PDE3B-202ENST00000455098 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
PDE3B-202ENST00000455098 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
PDE3B-202ENST00000455098 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
PDE3B-202ENST00000455098 NEUROD1Q13562 356 aa22.14■■□□□ 1.14
PDE3B-202ENST00000455098 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
PDE3B-202ENST00000455098 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
PDE3B-202ENST00000455098 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
PDE3B-202ENST00000455098 EEA1Q15075 1411 aa22.09■■□□□ 1.13
PDE3B-202ENST00000455098 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.13
PDE3B-202ENST00000455098 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
PDE3B-202ENST00000455098 CADPSQ9ULU8 1353 aa22.04■■□□□ 1.12
PDE3B-202ENST00000455098 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
PDE3B-202ENST00000455098 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
PDE3B-202ENST00000455098 NESP48681 1621 aa22■■□□□ 1.11
PDE3B-202ENST00000455098 MIER1Q8N108 512 aa22■■□□□ 1.11
PDE3B-202ENST00000455098 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
PDE3B-202ENST00000455098 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
PDE3B-202ENST00000455098 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
PDE3B-202ENST00000455098 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
PDE3B-202ENST00000455098 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
PDE3B-202ENST00000455098 VPS8Q8N3P4 1428 aa21.91■■□□□ 1.1
PDE3B-202ENST00000455098 CUX2O14529 1486 aa21.89■■□□□ 1.1
PDE3B-202ENST00000455098 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
PDE3B-202ENST00000455098 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
PDE3B-202ENST00000455098 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
PDE3B-202ENST00000455098 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
PDE3B-202ENST00000455098 SIN3AQ96ST3 1273 aa21.76■■□□□ 1.07
PDE3B-202ENST00000455098 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
PDE3B-202ENST00000455098 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
PDE3B-202ENST00000455098 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
PDE3B-202ENST00000455098 CHIC2Q9UKJ5 165 aa21.74■■□□□ 1.07
PDE3B-202ENST00000455098 KIF21BO75037 1637 aa21.7■■□□□ 1.06
PDE3B-202ENST00000455098 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
PDE3B-202ENST00000455098 CUX1P39880 1505 aa21.69■■□□□ 1.06
PDE3B-202ENST00000455098 ARAP1Q96P48 1450 aa21.67■■□□□ 1.06
PDE3B-202ENST00000455098 CFTRP13569 1480 aa21.66■■□□□ 1.06
PDE3B-202ENST00000455098 IGF1RP08069 1367 aa21.63■■□□□ 1.05
PDE3B-202ENST00000455098 TRIM52Q96A61 297 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms