RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 NISCHQ9Y2I1 1504 aa30.02■■■□□ 2.4
SFXN1-201ENST00000321442 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.3
SFXN1-201ENST00000321442 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
SFXN1-201ENST00000321442 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
SFXN1-201ENST00000321442 EHMT2Q96KQ7 1210 aa26.82■■□□□ 1.88
SFXN1-201ENST00000321442 PCGF6Q9BYE7 350 aa26.57■■□□□ 1.84
SFXN1-201ENST00000321442 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
SFXN1-201ENST00000321442 ABCC9O60706 1549 aa25.91■■□□□ 1.74
SFXN1-201ENST00000321442 HRCP23327 699 aa25.76■■□□□ 1.71
SFXN1-201ENST00000321442 TTBK1Q5TCY1 1321 aaPredicted RBP25.68■■□□□ 1.7
SFXN1-201ENST00000321442 RANGAP1P46060 587 aaPredicted RBP25.59■■□□□ 1.69
SFXN1-201ENST00000321442 PPARGC1BQ86YN6 1023 aaKnown RBP25.59■■□□□ 1.69
SFXN1-201ENST00000321442 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
SFXN1-201ENST00000321442 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
SFXN1-201ENST00000321442 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
SFXN1-201ENST00000321442 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
SFXN1-201ENST00000321442 ZEB1P37275 1124 aaPredicted RBP25.37■■□□□ 1.65
SFXN1-201ENST00000321442 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
SFXN1-201ENST00000321442 TRIM26Q12899 539 aaPredicted RBP25.24■■□□□ 1.63
SFXN1-201ENST00000321442 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
SFXN1-201ENST00000321442 CENPBP07199 599 aaPredicted RBP25.18■■□□□ 1.62
SFXN1-201ENST00000321442 UBTFP17480 764 aaKnown RBP25.04■■□□□ 1.6
SFXN1-201ENST00000321442 APLP2Q06481 763 aa25.03■■□□□ 1.6
SFXN1-201ENST00000321442 YTHDC1Q96MU7 727 aaKnown RBP25.02■■□□□ 1.6
SFXN1-201ENST00000321442 ZCCHC6Q5VYS8 1495 aaKnown RBP24.91■■□□□ 1.58
SFXN1-201ENST00000321442 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
SFXN1-201ENST00000321442 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
SFXN1-201ENST00000321442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.66■■□□□ 1.54
SFXN1-201ENST00000321442 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
SFXN1-201ENST00000321442 DIEXFQ68CQ4 756 aaKnown RBP24.42■■□□□ 1.5
SFXN1-201ENST00000321442 MYT1Q01538 1121 aa24.4■■□□□ 1.5
SFXN1-201ENST00000321442 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
SFXN1-201ENST00000321442 GTF3C3Q9Y5Q9 886 aa24.31■■□□□ 1.48
SFXN1-201ENST00000321442 ITGAEP38570 1179 aa24.27■■□□□ 1.48
SFXN1-201ENST00000321442 ERICH6Q7L0X2 663 aa24.17■■□□□ 1.46
SFXN1-201ENST00000321442 NEFLP07196 543 aa24.1■■□□□ 1.45
SFXN1-201ENST00000321442 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.45
SFXN1-201ENST00000321442 ACIN1Q9UKV3 1341 aaKnown RBP24.05■■□□□ 1.44
SFXN1-201ENST00000321442 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
SFXN1-201ENST00000321442 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
SFXN1-201ENST00000321442 SCAF1Q9H7N4 1312 aaKnown RBP23.96■■□□□ 1.43
SFXN1-201ENST00000321442 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
SFXN1-201ENST00000321442 P3H3Q8IVL6 736 aa23.89■■□□□ 1.42
SFXN1-201ENST00000321442 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
SFXN1-201ENST00000321442 NEUROD1Q13562 356 aa23.85■■□□□ 1.41
SFXN1-201ENST00000321442 FBLN2P98095 1184 aa23.84■■□□□ 1.41
SFXN1-201ENST00000321442 CSRNP3Q8WYN3 585 aa23.84■■□□□ 1.41
SFXN1-201ENST00000321442 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
SFXN1-201ENST00000321442 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
SFXN1-201ENST00000321442 NACADO15069 1562 aa23.78■■□□□ 1.4
SFXN1-201ENST00000321442 BCANQ96GW7 911 aa23.73■■□□□ 1.39
SFXN1-201ENST00000321442 CNGB1Q14028 1251 aaPredicted RBP23.6■■□□□ 1.37
SFXN1-201ENST00000321442 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
SFXN1-201ENST00000321442 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
SFXN1-201ENST00000321442 MYT1LQ9UL68 1186 aa23.51■■□□□ 1.35
SFXN1-201ENST00000321442 POLR3GLQ9BT43 218 aa23.45■■□□□ 1.35
SFXN1-201ENST00000321442 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
SFXN1-201ENST00000321442 MIER1Q8N108 512 aa23.35■■□□□ 1.33
SFXN1-201ENST00000321442 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
SFXN1-201ENST00000321442 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
SFXN1-201ENST00000321442 WIZO95785 1651 aa23.21■■□□□ 1.31
SFXN1-201ENST00000321442 TRIM52Q96A61 297 aa23.19■■□□□ 1.3
SFXN1-201ENST00000321442 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
SFXN1-201ENST00000321442 SOGA1O94964 1423 aa23.15■■□□□ 1.3
SFXN1-201ENST00000321442 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
SFXN1-201ENST00000321442 ANP32CO43423 234 aa23.14■■□□□ 1.29
SFXN1-201ENST00000321442 FKBP8Q14318 412 aa23.13■■□□□ 1.29
SFXN1-201ENST00000321442 ZNF777Q9ULD5 760 aaPredicted RBP23.12■■□□□ 1.29
SFXN1-201ENST00000321442 DDX10Q13206 875 aaKnown RBP23.04■■□□□ 1.28
SFXN1-201ENST00000321442 CDK11AQ9UQ88 783 aaPredicted RBP23.01■■□□□ 1.27
SFXN1-201ENST00000321442 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
SFXN1-201ENST00000321442 CLIP1P30622 1438 aa22.98■■□□□ 1.27
SFXN1-201ENST00000321442 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
SFXN1-201ENST00000321442 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
SFXN1-201ENST00000321442 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
SFXN1-201ENST00000321442 DAXXQ9UER7 740 aaPredicted RBP22.96■■□□□ 1.27
SFXN1-201ENST00000321442 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
SFXN1-201ENST00000321442 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
SFXN1-201ENST00000321442 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
SFXN1-201ENST00000321442 CLSPNQ9HAW4 1339 aa22.81■■□□□ 1.24
SFXN1-201ENST00000321442 HNRNPUQ00839 825 aaKnown RBP eCLIP22.8■■□□□ 1.24
SFXN1-201ENST00000321442 GOLGA3Q08378 1498 aa22.78■■□□□ 1.24
SFXN1-201ENST00000321442 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
SFXN1-201ENST00000321442 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
SFXN1-201ENST00000321442 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
SFXN1-201ENST00000321442 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
SFXN1-201ENST00000321442 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
SFXN1-201ENST00000321442 CUX2O14529 1486 aa22.74■■□□□ 1.23
SFXN1-201ENST00000321442 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
SFXN1-201ENST00000321442 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
SFXN1-201ENST00000321442 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
SFXN1-201ENST00000321442 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
SFXN1-201ENST00000321442 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
SFXN1-201ENST00000321442 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
SFXN1-201ENST00000321442 KCNH8Q96L42 1107 aa22.65■■□□□ 1.22
SFXN1-201ENST00000321442 EEA1Q15075 1411 aa22.65■■□□□ 1.22
SFXN1-201ENST00000321442 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.22
SFXN1-201ENST00000321442 SUPT16HQ9Y5B9 1047 aaKnown RBP22.64■■□□□ 1.22
SFXN1-201ENST00000321442 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.21
SFXN1-201ENST00000321442 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms