RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
RBM39-213ENST00000433027 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
RBM39-213ENST00000433027 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
RBM39-213ENST00000433027 ABCC9O60706 1549 aa29.81■■■□□ 2.36
RBM39-213ENST00000433027 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
RBM39-213ENST00000433027 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
RBM39-213ENST00000433027 NACADO15069 1562 aa29.46■■■□□ 2.31
RBM39-213ENST00000433027 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
RBM39-213ENST00000433027 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
RBM39-213ENST00000433027 SCRIBQ14160 1630 aa28.62■■■□□ 2.17
RBM39-213ENST00000433027 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
RBM39-213ENST00000433027 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
RBM39-213ENST00000433027 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
RBM39-213ENST00000433027 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
RBM39-213ENST00000433027 BAZ1AQ9NRL2 1556 aaPredicted RBP27.72■■■□□ 2.03
RBM39-213ENST00000433027 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
RBM39-213ENST00000433027 SMARCA4P51532 1647 aa27.56■■■□□ 2
RBM39-213ENST00000433027 RSF1Q96T23 1441 aaPredicted RBP27.53■■■□□ 2
RBM39-213ENST00000433027 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
RBM39-213ENST00000433027 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
RBM39-213ENST00000433027 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.98
RBM39-213ENST00000433027 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
RBM39-213ENST00000433027 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
RBM39-213ENST00000433027 WIZO95785 1651 aa27.21■■□□□ 1.95
RBM39-213ENST00000433027 ATAD2BQ9ULI0 1458 aa27.21■■□□□ 1.95
RBM39-213ENST00000433027 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
RBM39-213ENST00000433027 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
RBM39-213ENST00000433027 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
RBM39-213ENST00000433027 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
RBM39-213ENST00000433027 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
RBM39-213ENST00000433027 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
RBM39-213ENST00000433027 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
RBM39-213ENST00000433027 CFTRP13569 1480 aa26.39■■□□□ 1.82
RBM39-213ENST00000433027 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
RBM39-213ENST00000433027 LAMC3Q9Y6N6 1575 aa26.3■■□□□ 1.8
RBM39-213ENST00000433027 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
RBM39-213ENST00000433027 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
RBM39-213ENST00000433027 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
RBM39-213ENST00000433027 NESP48681 1621 aa26.02■■□□□ 1.76
RBM39-213ENST00000433027 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
RBM39-213ENST00000433027 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
RBM39-213ENST00000433027 CEP164Q9UPV0 1460 aa25.93■■□□□ 1.74
RBM39-213ENST00000433027 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
RBM39-213ENST00000433027 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
RBM39-213ENST00000433027 TOP2BQ02880 1626 aa25.84■■□□□ 1.73
RBM39-213ENST00000433027 BIVM-ERCC5R4GMW8 1640 aa25.83■■□□□ 1.73
RBM39-213ENST00000433027 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
RBM39-213ENST00000433027 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
RBM39-213ENST00000433027 CUX1P39880 1505 aa25.77■■□□□ 1.72
RBM39-213ENST00000433027 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
RBM39-213ENST00000433027 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
RBM39-213ENST00000433027 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
RBM39-213ENST00000433027 TOPBP1Q92547 1522 aa25.69■■□□□ 1.7
RBM39-213ENST00000433027 URB2Q14146 1524 aaKnown RBP25.66■■□□□ 1.7
RBM39-213ENST00000433027 WDR62O43379 1518 aa25.63■■□□□ 1.69
RBM39-213ENST00000433027 EEA1Q15075 1411 aa25.57■■□□□ 1.68
RBM39-213ENST00000433027 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
RBM39-213ENST00000433027 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
RBM39-213ENST00000433027 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
RBM39-213ENST00000433027 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
RBM39-213ENST00000433027 SOGA1O94964 1423 aa25.44■■□□□ 1.66
RBM39-213ENST00000433027 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
RBM39-213ENST00000433027 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
RBM39-213ENST00000433027 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
RBM39-213ENST00000433027 CUX2O14529 1486 aa25.34■■□□□ 1.65
RBM39-213ENST00000433027 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
RBM39-213ENST00000433027 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
RBM39-213ENST00000433027 CSRNP3Q8WYN3 585 aa25.25■■□□□ 1.63
RBM39-213ENST00000433027 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
RBM39-213ENST00000433027 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.62
RBM39-213ENST00000433027 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
RBM39-213ENST00000433027 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
RBM39-213ENST00000433027 KIF21BO75037 1637 aa25.14■■□□□ 1.61
RBM39-213ENST00000433027 IGF1RP08069 1367 aa25.14■■□□□ 1.61
RBM39-213ENST00000433027 FAM9AQ8IZU1 332 aaPredicted RBP25.12■■□□□ 1.61
RBM39-213ENST00000433027 CUL7Q14999 1698 aa25.1■■□□□ 1.61
RBM39-213ENST00000433027 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
RBM39-213ENST00000433027 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
RBM39-213ENST00000433027 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
RBM39-213ENST00000433027 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
RBM39-213ENST00000433027 GOLGA3Q08378 1498 aa25.04■■□□□ 1.6
RBM39-213ENST00000433027 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
RBM39-213ENST00000433027 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
RBM39-213ENST00000433027 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
RBM39-213ENST00000433027 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.63e-11■■■■□ 22.5
RBM39-213ENST00000433027 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
RBM39-213ENST00000433027 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
RBM39-213ENST00000433027 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.59
RBM39-213ENST00000433027 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
RBM39-213ENST00000433027 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
RBM39-213ENST00000433027 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
RBM39-213ENST00000433027 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
RBM39-213ENST00000433027 SYNJ2O15056 1496 aa24.83■■□□□ 1.56
RBM39-213ENST00000433027 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
RBM39-213ENST00000433027 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
RBM39-213ENST00000433027 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
RBM39-213ENST00000433027 CTTNBP2Q8WZ74 1663 aa24.68■■□□□ 1.54
RBM39-213ENST00000433027 NUP160Q12769 1436 aa24.63■■□□□ 1.53
RBM39-213ENST00000433027 CEP162Q5TB80 1403 aa24.63■■□□□ 1.53
RBM39-213ENST00000433027 KIAA0586Q9BVV6 1533 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms