RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 NISCHQ9Y2I1 1504 aa36.09■■■■□ 3.37
RTCA-203ENST00000370128 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
RTCA-203ENST00000370128 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
RTCA-203ENST00000370128 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.47
RTCA-203ENST00000370128 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
RTCA-203ENST00000370128 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.35
RTCA-203ENST00000370128 DCAF1Q9Y4B6 1507 aa29.68■■■□□ 2.34
RTCA-203ENST00000370128 PELP1Q8IZL8 1130 aaKnown RBP29.54■■■□□ 2.32
RTCA-203ENST00000370128 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
RTCA-203ENST00000370128 MYO15BQ96JP2 1530 aa28.91■■■□□ 2.22
RTCA-203ENST00000370128 MYT1Q01538 1121 aa28.8■■■□□ 2.2
RTCA-203ENST00000370128 ABCC9O60706 1549 aa28.76■■■□□ 2.19
RTCA-203ENST00000370128 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
RTCA-203ENST00000370128 HRCP23327 699 aa28.71■■■□□ 2.19
RTCA-203ENST00000370128 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
RTCA-203ENST00000370128 NACADO15069 1562 aa28.47■■■□□ 2.15
RTCA-203ENST00000370128 RB1CC1Q8TDY2 1594 aa28.17■■■□□ 2.1
RTCA-203ENST00000370128 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.09
RTCA-203ENST00000370128 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
RTCA-203ENST00000370128 MROH2BQ7Z745 1585 aa28.02■■■□□ 2.08
RTCA-203ENST00000370128 PCGF6Q9BYE7 350 aa27.96■■■□□ 2.07
RTCA-203ENST00000370128 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
RTCA-203ENST00000370128 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
RTCA-203ENST00000370128 WIZO95785 1651 aa27.86■■■□□ 2.05
RTCA-203ENST00000370128 SCAF1Q9H7N4 1312 aaKnown RBP27.74■■■□□ 2.03
RTCA-203ENST00000370128 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
RTCA-203ENST00000370128 UNC13AQ9UPW8 1703 aa27.59■■■□□ 2.01
RTCA-203ENST00000370128 FAM9AQ8IZU1 332 aaPredicted RBP27.57■■■□□ 2
RTCA-203ENST00000370128 TRIM26Q12899 539 aaPredicted RBP27.53■■■□□ 2
RTCA-203ENST00000370128 SMARCA4P51532 1647 aa27.51■■□□□ 1.99
RTCA-203ENST00000370128 EIF4G1Q04637 1599 aaKnown RBP27.49■■□□□ 1.99
RTCA-203ENST00000370128 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.99
RTCA-203ENST00000370128 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
RTCA-203ENST00000370128 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
RTCA-203ENST00000370128 SMARCA2P51531 1590 aa27.29■■□□□ 1.96
RTCA-203ENST00000370128 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
RTCA-203ENST00000370128 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.96
RTCA-203ENST00000370128 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.94
RTCA-203ENST00000370128 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
RTCA-203ENST00000370128 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
RTCA-203ENST00000370128 SOGA1O94964 1423 aa26.89■■□□□ 1.89
RTCA-203ENST00000370128 ZEB1P37275 1124 aaPredicted RBP26.88■■□□□ 1.89
RTCA-203ENST00000370128 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
RTCA-203ENST00000370128 EEA1Q15075 1411 aa26.8■■□□□ 1.88
RTCA-203ENST00000370128 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
RTCA-203ENST00000370128 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
RTCA-203ENST00000370128 ACIN1Q9UKV3 1341 aaKnown RBP26.75■■□□□ 1.87
RTCA-203ENST00000370128 CSRNP3Q8WYN3 585 aa26.73■■□□□ 1.87
RTCA-203ENST00000370128 BAZ1BQ9UIG0 1483 aaKnown RBP26.72■■□□□ 1.87
RTCA-203ENST00000370128 CEP162Q5TB80 1403 aa26.72■■□□□ 1.87
RTCA-203ENST00000370128 TNIKQ9UKE5 1360 aa26.72■■□□□ 1.87
RTCA-203ENST00000370128 SYNJ1O43426 1573 aa26.64■■□□□ 1.85
RTCA-203ENST00000370128 BCL11AQ9H165 835 aa26.61■■□□□ 1.85
RTCA-203ENST00000370128 GOLGA3Q08378 1498 aa26.57■■□□□ 1.84
RTCA-203ENST00000370128 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
RTCA-203ENST00000370128 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
RTCA-203ENST00000370128 GTF3C3Q9Y5Q9 886 aa26.51■■□□□ 1.84
RTCA-203ENST00000370128 PRKCSHP14314 528 aaPredicted RBP26.47■■□□□ 1.83
RTCA-203ENST00000370128 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
RTCA-203ENST00000370128 KIF21BO75037 1637 aa26.44■■□□□ 1.82
RTCA-203ENST00000370128 CENPBP07199 599 aaPredicted RBP26.41■■□□□ 1.82
RTCA-203ENST00000370128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.4■■□□□ 1.82
RTCA-203ENST00000370128 TOP2BQ02880 1626 aa26.35■■□□□ 1.81
RTCA-203ENST00000370128 NCAPD3P42695 1498 aa26.35■■□□□ 1.81
RTCA-203ENST00000370128 HMGXB3Q12766 1538 aa26.35■■□□□ 1.81
RTCA-203ENST00000370128 CCER1Q8TC90 406 aaPredicted RBP26.32■■□□□ 1.8
RTCA-203ENST00000370128 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
RTCA-203ENST00000370128 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
RTCA-203ENST00000370128 CLIP1P30622 1438 aa26.25■■□□□ 1.79
RTCA-203ENST00000370128 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.78
RTCA-203ENST00000370128 CUX1P39880 1505 aa26.1■■□□□ 1.77
RTCA-203ENST00000370128 CFTRP13569 1480 aa26.1■■□□□ 1.77
RTCA-203ENST00000370128 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
RTCA-203ENST00000370128 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
RTCA-203ENST00000370128 RANGAP1P46060 587 aaPredicted RBP25.97■■□□□ 1.75
RTCA-203ENST00000370128 ERICH6Q7L0X2 663 aa25.94■■□□□ 1.74
RTCA-203ENST00000370128 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
RTCA-203ENST00000370128 APLP2Q06481 763 aa25.93■■□□□ 1.74
RTCA-203ENST00000370128 PRDM2Q13029 1718 aa25.89■■□□□ 1.74
RTCA-203ENST00000370128 ANP32EQ9BTT0 268 aa25.88■■□□□ 1.73
RTCA-203ENST00000370128 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
RTCA-203ENST00000370128 ARAP1Q96P48 1450 aa25.86■■□□□ 1.73
RTCA-203ENST00000370128 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
RTCA-203ENST00000370128 DIEXFQ68CQ4 756 aaKnown RBP25.75■■□□□ 1.71
RTCA-203ENST00000370128 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.71
RTCA-203ENST00000370128 CUX2O14529 1486 aa25.7■■□□□ 1.7
RTCA-203ENST00000370128 IGF1RP08069 1367 aa25.67■■□□□ 1.7
RTCA-203ENST00000370128 ARHGAP35Q9NRY4 1499 aa25.67■■□□□ 1.7
RTCA-203ENST00000370128 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
RTCA-203ENST00000370128 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.7
RTCA-203ENST00000370128 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
RTCA-203ENST00000370128 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
RTCA-203ENST00000370128 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
RTCA-203ENST00000370128 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
RTCA-203ENST00000370128 DHX57Q6P158 1386 aaKnown RBP25.43■■□□□ 1.66
RTCA-203ENST00000370128 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
RTCA-203ENST00000370128 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
RTCA-203ENST00000370128 CCNB3Q8WWL7 1395 aa25.4■■□□□ 1.66
RTCA-203ENST00000370128 MAP3K1Q13233 1512 aa25.38■■□□□ 1.65
RTCA-203ENST00000370128 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms