Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.391e-6■■□□□ 12.1
RPS3P23396 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.434e-8■■□□□ 12.1
RPS3P23396 INTS7-208ENST00000469606 4447 ntTSL 1 (best)5.91□□□□□ -1.461e-6■■□□□ 12.1
RPS3P23396 UAP1-205ENST00000474728 660 ntTSL 25.66□□□□□ -1.51e-6■■□□□ 12.1
RPS3P23396 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.65□□□□□ -1.51e-6■■□□□ 12.1
RPS3P23396 UQCRB-206ENST00000519322 750 ntTSL 25.65□□□□□ -1.51e-6■■□□□ 12.1
RPS3P23396 UQCRB-207ENST00000521036 982 ntTSL 25.2□□□□□ -1.581e-6■■□□□ 12.1
RPS3P23396 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.02□□□□□ -1.611e-6■■□□□ 12.1
RPS3P23396 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.644e-8■■□□□ 12.1
RPS3P23396 UQCRB-203ENST00000517603 1041 ntTSL 1 (best)4.03□□□□□ -1.761e-6■■□□□ 12.1
RPS3P23396 SUB1-208ENST00000511175 636 ntTSL 21.39□□□□□ -2.192e-6■■□□□ 12.1
RPS3P23396 HMGA1-206ENST00000478214 716 ntTSL 1 (best)15.17■□□□□ 0.021e-11■■□□□ 12.1
RPS3P23396 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.191e-13■■□□□ 12.1
RPS3P23396 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.97□□□□□ -0.013e-8■■□□□ 12.1
RPS3P23396 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.233e-8■■□□□ 12.1
RPS3P23396 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.743e-10■■□□□ 12.1
RPS3P23396 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.392e-10■■□□□ 12.1
RPS3P23396 RPS14-205ENST00000519690 3119 ntTSL 214.87□□□□□ -0.032e-10■■□□□ 12.1
RPS3P23396 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.642e-10■■□□□ 12.1
RPS3P23396 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.633e-13■■□□□ 12.1
RPS3P23396 STC2-202ENST00000518455 473 ntTSL 59.72□□□□□ -0.853e-13■■□□□ 12.1
RPS3P23396 NPEPPS-216ENST00000530514 2092 ntTSL 28.69□□□□□ -1.023e-13■■□□□ 12.1
RPS3P23396 NPEPPS-212ENST00000528565 558 ntTSL 38.12□□□□□ -1.113e-13■■□□□ 12.1
RPS3P23396 STC2-205ENST00000520648 616 ntTSL 28.08□□□□□ -1.123e-13■■□□□ 12.1
RPS3P23396 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.97□□□□□ -1.133e-13■■□□□ 12.1
RPS3P23396 METTL26-206ENST00000448973 1710 ntTSL 1 (best)23.43■■□□□ 1.349e-7■■□□□ 12.1
RPS3P23396 METTL26-210ENST00000565799 716 ntTSL 321.45■■□□□ 1.029e-7■■□□□ 12.1
RPS3P23396 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.23■□□□□ 0.839e-7■■□□□ 12.1
RPS3P23396 METTL26-209ENST00000565163 485 ntTSL 318.67■□□□□ 0.589e-7■■□□□ 12.1
RPS3P23396 METTL26-213ENST00000568830 590 ntTSL 317.77■□□□□ 0.449e-7■■□□□ 12.1
RPS3P23396 METTL26-211ENST00000568077 588 ntTSL 317.77■□□□□ 0.449e-7■■□□□ 12.1
RPS3P23396 METTL26-212ENST00000568773 499 ntTSL 216.98■□□□□ 0.319e-7■■□□□ 12.1
RPS3P23396 METTL26-207ENST00000456420 755 ntTSL 316.88■□□□□ 0.299e-7■■□□□ 12.1
RPS3P23396 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.259e-7■■□□□ 12.1
RPS3P23396 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.64■□□□□ 0.259e-7■■□□□ 12.1
RPS3P23396 METTL26-208ENST00000564039 518 ntTSL 216.35■□□□□ 0.219e-7■■□□□ 12.1
RPS3P23396 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.02■□□□□ 0.169e-7■■□□□ 12.1
RPS3P23396 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.19■□□□□ 0.029e-7■■□□□ 12.1
RPS3P23396 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.02■□□□□ -09e-7■■□□□ 12.1
RPS3P23396 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.417e-7■■□□□ 12.1
RPS3P23396 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.257e-7■■□□□ 12.1
RPS3P23396 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.077e-7■■□□□ 12.1
RPS3P23396 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.114e-7■■□□□ 12.1
RPS3P23396 SSBP1-203ENST00000463093 600 ntTSL 513.34□□□□□ -0.274e-7■■□□□ 12.1
RPS3P23396 SSBP1-206ENST00000467681 630 ntTSL 213.34□□□□□ -0.274e-7■■□□□ 12.1
RPS3P23396 SSBP1-212ENST00000489378 1434 ntTSL 28.4□□□□□ -1.064e-7■■□□□ 12.1
RPS3P23396 SSBP1-204ENST00000465167 517 ntTSL 55.49□□□□□ -1.534e-7■■□□□ 12.1
RPS3P23396 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.62□□□□□ -0.392e-7■■□□□ 12.1
RPS3P23396 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC11.99□□□□□ -0.492e-7■■□□□ 12.1
RPS3P23396 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.522e-7■■□□□ 12.1
RPS3P23396 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC11.75□□□□□ -0.532e-7■■□□□ 12.1
RPS3P23396 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)11.52□□□□□ -0.572e-7■■□□□ 12.1
RPS3P23396 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC11.48□□□□□ -0.572e-7■■□□□ 12.1
RPS3P23396 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC11.05□□□□□ -0.642e-7■■□□□ 12.1
RPS3P23396 HADHA-203ENST00000471743 690 ntTSL 56.38□□□□□ -1.393e-6■■□□□ 12.1
RPS3P23396 CTSA-216ENST00000607212 590 ntTSL 414.15□□□□□ -0.141e-8■■□□□ 12.1
RPS3P23396 CTSA-211ENST00000606066 603 ntTSL 514□□□□□ -0.171e-8■■□□□ 12.1
RPS3P23396 CTSA-212ENST00000606394 584 ntTSL 412.51□□□□□ -0.411e-8■■□□□ 12.1
RPS3P23396 SRSF7-203ENST00000415527 1135 ntTSL 514.09□□□□□ -0.152e-7■■□□□ 12.1
RPS3P23396 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.315e-8■■□□□ 12.1
RPS3P23396 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.895e-8■■□□□ 12.1
RPS3P23396 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.979e-18■■□□□ 12.1
RPS3P23396 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.289e-18■■□□□ 12.1
RPS3P23396 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.559e-18■■□□□ 12.1
RPS3P23396 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.119e-18■■□□□ 12.1
RPS3P23396 HMGB1-207ENST00000468384 503 ntTSL 1 (best)3.61□□□□□ -1.839e-18■■□□□ 12.1
RPS3P23396 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.96□□□□□ -1.949e-18■■□□□ 12.1
RPS3P23396 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.69□□□□□ -2.149e-18■■□□□ 12.1
RPS3P23396 DDRGK1-203ENST00000470203 480 ntTSL 310.69□□□□□ -0.72e-9■■□□□ 12.1
RPS3P23396 PTMS-205ENST00000540828 644 ntTSL 1 (best)20.45■□□□□ 0.869e-7■■□□□ 12.1
RPS3P23396 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.759e-7■■□□□ 12.1
RPS3P23396 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.619e-7■■□□□ 12.1
RPS3P23396 PTMS-203ENST00000538057 976 ntTSL 218■□□□□ 0.479e-7■■□□□ 12.1
RPS3P23396 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.08■□□□□ 0.169e-7■■□□□ 12.1
RPS3P23396 PTMS-204ENST00000540667 820 ntTSL 213.05□□□□□ -0.329e-7■■□□□ 12.1
RPS3P23396 RPL18-215ENST00000552705 1081 ntTSL 212.87□□□□□ -0.356e-9■■□□□ 12.1
RPS3P23396 SF3B3-215ENST00000577085 529 ntTSL 414.99□□□□□ -0.013e-6■■□□□ 12.1
RPS3P23396 SF3B3-207ENST00000566095 453 ntTSL 39.76□□□□□ -0.853e-6■■□□□ 12.1
RPS3P23396 SF3B3-210ENST00000567654 334 ntTSL 35.63□□□□□ -1.513e-6■■□□□ 12.1
RPS3P23396 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.858e-9■■□□□ 12.1
RPS3P23396 CD99-208ENST00000482405 842 ntTSL 220.37■□□□□ 0.858e-9■■□□□ 12.1
RPS3P23396 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.748e-9■■□□□ 12.1
RPS3P23396 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.698e-9■■□□□ 12.1
RPS3P23396 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.328e-9■■□□□ 12.1
RPS3P23396 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.238e-9■■□□□ 12.1
RPS3P23396 CD99-211ENST00000623253 573 ntTSL 1 (best)15.35■□□□□ 0.058e-9■■□□□ 12.1
RPS3P23396 A2M-208ENST00000497324 533 ntTSL 310.5□□□□□ -0.733e-71■■□□□ 12.1
RPS3P23396 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.49■■■□□ 2.154e-7■■□□□ 12.1
RPS3P23396 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.63■■■□□ 2.014e-7■■□□□ 12.1
RPS3P23396 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.434e-7■■□□□ 12.1
RPS3P23396 PHC2-212ENST00000493483 760 ntTSL 323.15■■□□□ 1.34e-7■■□□□ 12.1
RPS3P23396 AC118553.2-205ENST00000638779 1983 ntTSL 521.89■■□□□ 1.094e-7■■□□□ 12.1
RPS3P23396 GHDC-205ENST00000585735 940 ntTSL 220.36■□□□□ 0.858e-10■■□□□ 12.1
RPS3P23396 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.738e-10■■□□□ 12.1
RPS3P23396 RER1-201ENST00000306256 695 ntTSL 519.64■□□□□ 0.734e-7■■□□□ 12.1
RPS3P23396 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.64■□□□□ 0.734e-7■■□□□ 12.1
RPS3P23396 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.691e-11■■□□□ 12.1
RPS3P23396 PROS1-201ENST00000348974 806 ntTSL 518.33■□□□□ 0.524e-7■■□□□ 12.1
RPS3P23396 AC118553.2-204ENST00000639040 2568 ntTSL 517.95■□□□□ 0.464e-7■■□□□ 12.1
RPS3P23396 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.464e-7■■□□□ 12.1
Retrieved 100 of 24,271 protein–RNA pairs in 171.3 ms