RNA–Protein interactions for RNA: ENST00000585735.1

GHDC-205, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 940 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-205ENST00000585735 NISCHQ9Y2I1 1504 aa47.69■■■■■ 5.22
GHDC-205ENST00000585735 ABCC9O60706 1549 aa44.09■■■■■ 4.65
GHDC-205ENST00000585735 CCDC180Q9P1Z9 1646 aa43.24■■■■■ 4.51
GHDC-205ENST00000585735 DNAJC5BQ9UF47 199 aa42.27■■■■■ 4.36
GHDC-205ENST00000585735 RB1CC1Q8TDY2 1594 aa41.57■■■■■ 4.25
GHDC-205ENST00000585735 NACADO15069 1562 aa41.06■■■■■ 4.16
GHDC-205ENST00000585735 PABPN1Q86U42 306 aaKnown RBP eCLIP40.9■■■■■ 4.14
GHDC-205ENST00000585735 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
GHDC-205ENST00000585735 DCAF8L2P0C7V8 631 aa40.61■■■■■ 4.09
GHDC-205ENST00000585735 BICRAQ9NZM4 1560 aa40.47■■■■■ 4.07
GHDC-205ENST00000585735 MYO15BQ96JP2 1530 aa40.18■■■■■ 4.02
GHDC-205ENST00000585735 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
GHDC-205ENST00000585735 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
GHDC-205ENST00000585735 SHROOM4Q9ULL8 1493 aa39.7■■■■□ 3.95
GHDC-205ENST00000585735 EIF4G1Q04637 1599 aaKnown RBP39.5■■■■□ 3.91
GHDC-205ENST00000585735 DNAJC5Q9H3Z4 198 aa39.46■■■■□ 3.91
GHDC-205ENST00000585735 ZCCHC6Q5VYS8 1495 aaKnown RBP39.33■■■■□ 3.89
GHDC-205ENST00000585735 DCAF1Q9Y4B6 1507 aa39.33■■■■□ 3.89
GHDC-205ENST00000585735 SCRIBQ14160 1630 aa39.3■■■■□ 3.88
GHDC-205ENST00000585735 CUX2O14529 1486 aa38.37■■■■□ 3.73
GHDC-205ENST00000585735 ERCC6Q03468 1493 aa38.09■■■■□ 3.69
GHDC-205ENST00000585735 NCAPD3P42695 1498 aa37.92■■■■□ 3.66
GHDC-205ENST00000585735 ATAD2BQ9ULI0 1458 aa37.66■■■■□ 3.62
GHDC-205ENST00000585735 NESP48681 1621 aa37.65■■■■□ 3.62
GHDC-205ENST00000585735 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
GHDC-205ENST00000585735 SMARCA2P51531 1590 aa37.5■■■■□ 3.59
GHDC-205ENST00000585735 THOC2Q8NI27 1593 aaKnown RBP37.46■■■■□ 3.59
GHDC-205ENST00000585735 SMARCA4P51532 1647 aa37.43■■■■□ 3.58
GHDC-205ENST00000585735 TRIM41Q8WV44 630 aa37.29■■■■□ 3.56
GHDC-205ENST00000585735 LAMC3Q9Y6N6 1575 aa37.22■■■■□ 3.55
GHDC-205ENST00000585735 BAZ1BQ9UIG0 1483 aaKnown RBP37.21■■■■□ 3.55
GHDC-205ENST00000585735 KIF21AQ7Z4S6 1674 aa37.2■■■■□ 3.55
GHDC-205ENST00000585735 PEG3Q9GZU2 1588 aa37.07■■■■□ 3.52
GHDC-205ENST00000585735 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
GHDC-205ENST00000585735 PDS5BQ9NTI5 1447 aa36.99■■■■□ 3.51
GHDC-205ENST00000585735 MROH2BQ7Z745 1585 aa36.75■■■■□ 3.47
GHDC-205ENST00000585735 MRC2Q9UBG0 1479 aa36.74■■■■□ 3.47
GHDC-205ENST00000585735 WDR62O43379 1518 aa36.7■■■■□ 3.47
GHDC-205ENST00000585735 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
GHDC-205ENST00000585735 SUPT5HO00267 1087 aaKnown RBP36.5■■■■□ 3.43
GHDC-205ENST00000585735 OSCARQ8IYS5 282 aa36.47■■■■□ 3.43
GHDC-205ENST00000585735 CEP164Q9UPV0 1460 aa36.39■■■■□ 3.42
GHDC-205ENST00000585735 WIZO95785 1651 aa36.32■■■■□ 3.4
GHDC-205ENST00000585735 FANCD2Q9BXW9 1451 aa36.29■■■■□ 3.4
GHDC-205ENST00000585735 RSF1Q96T23 1441 aaPredicted RBP36.27■■■■□ 3.4
GHDC-205ENST00000585735 RIMBP3CA6NJZ7 1639 aa36.16■■■■□ 3.38
GHDC-205ENST00000585735 RIMBP3BA6NNM3 1639 aa36.16■■■■□ 3.38
GHDC-205ENST00000585735 RIMBP3Q9UFD9 1639 aa36.16■■■■□ 3.38
GHDC-205ENST00000585735 CFTRP13569 1480 aa36.1■■■■□ 3.37
GHDC-205ENST00000585735 URB2Q14146 1524 aaKnown RBP36.08■■■■□ 3.37
GHDC-205ENST00000585735 ARHGEF11O15085 1522 aa35.91■■■■□ 3.34
GHDC-205ENST00000585735 PRDM2Q13029 1718 aa35.79■■■■□ 3.32
GHDC-205ENST00000585735 ZNF608Q9ULD9 1512 aaPredicted RBP35.78■■■■□ 3.32
GHDC-205ENST00000585735 TOP2AP11388 1531 aaKnown RBP35.71■■■■□ 3.31
GHDC-205ENST00000585735 IFT140Q96RY7 1462 aa35.7■■■■□ 3.31
GHDC-205ENST00000585735 CYB5RLQ6IPT4 315 aa35.69■■■■□ 3.3
GHDC-205ENST00000585735 TRHP20396 242 aaPredicted RBP35.56■■■■□ 3.28
GHDC-205ENST00000585735 EIF4G3O43432 1585 aaKnown RBP35.54■■■■□ 3.28
GHDC-205ENST00000585735 CHD1O14646 1710 aa35.54■■■■□ 3.28
GHDC-205ENST00000585735 TOPBP1Q92547 1522 aa35.52■■■■□ 3.28
GHDC-205ENST00000585735 ARAP1Q96P48 1450 aa35.49■■■■□ 3.27
GHDC-205ENST00000585735 ABCC8Q09428 1581 aa35.35■■■■□ 3.25
GHDC-205ENST00000585735 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
GHDC-205ENST00000585735 AQRO60306 1485 aaKnown RBP eCLIP35.34■■■■□ 3.25
GHDC-205ENST00000585735 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.25
GHDC-205ENST00000585735 DNMBPQ6XZF7 1577 aa35.3■■■■□ 3.24
GHDC-205ENST00000585735 FBLN2P98095 1184 aa35.25■■■■□ 3.23
GHDC-205ENST00000585735 AEBP2Q6ZN18 517 aaPredicted RBP35.2■■■■□ 3.23
GHDC-205ENST00000585735 POLA1P09884 1462 aaPredicted RBP35.09■■■■□ 3.21
GHDC-205ENST00000585735 CLASP1Q7Z460 1538 aa35.03■■■■□ 3.2
GHDC-205ENST00000585735 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
GHDC-205ENST00000585735 TDRD9Q8NDG6 1382 aaKnown RBP34.96■■■■□ 3.19
GHDC-205ENST00000585735 SNAPC4Q5SXM2 1469 aa34.91■■■■□ 3.18
GHDC-205ENST00000585735 SOGA1O94964 1423 aa34.9■■■■□ 3.18
GHDC-205ENST00000585735 SYNJ1O43426 1573 aa34.89■■■■□ 3.18
GHDC-205ENST00000585735 CHIC1Q5VXU3 224 aa34.87■■■■□ 3.17
GHDC-205ENST00000585735 CHMP7Q8WUX9 453 aaPredicted RBP34.84■■■■□ 3.17
GHDC-205ENST00000585735 WDR97A6NE52 1622 aa34.84■■■■□ 3.17
GHDC-205ENST00000585735 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
GHDC-205ENST00000585735 FGD5Q6ZNL6 1462 aa34.73■■■■□ 3.15
GHDC-205ENST00000585735 GAPVD1Q14C86 1478 aa34.7■■■■□ 3.15
GHDC-205ENST00000585735 SYNJ2O15056 1496 aa34.69■■■■□ 3.14
GHDC-205ENST00000585735 GRIN2BQ13224 1484 aa34.69■■■■□ 3.14
GHDC-205ENST00000585735 PBRM1Q86U86 1689 aa34.59■■■■□ 3.13
GHDC-205ENST00000585735 CUX1P39880 1505 aa34.57■■■■□ 3.12
GHDC-205ENST00000585735 ERCC6L2Q5T890 1561 aa34.45■■■■□ 3.11
GHDC-205ENST00000585735 KIF13AQ9H1H9 1805 aa34.35■■■■□ 3.09
GHDC-205ENST00000585735 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
GHDC-205ENST00000585735 CEP170Q5SW79 1584 aa34.28■■■■□ 3.08
GHDC-205ENST00000585735 ABCA10Q8WWZ4 1543 aa34.28■■■■□ 3.08
GHDC-205ENST00000585735 GRIN2AQ12879 1464 aa34.26■■■■□ 3.07
GHDC-205ENST00000585735 SHROOM2Q13796 1616 aa34.2■■■■□ 3.07
GHDC-205ENST00000585735 NUP160Q12769 1436 aa34.18■■■■□ 3.06
GHDC-205ENST00000585735 WRNQ14191 1432 aaPredicted RBP eCLIP34.16■■■■□ 3.06
GHDC-205ENST00000585735 ADAMTS12P58397 1594 aa34.13■■■■□ 3.05
GHDC-205ENST00000585735 FHAD1B1AJZ9 1412 aa33.96■■■■□ 3.03
GHDC-205ENST00000585735 PRG4Q92954 1404 aaPredicted RBP33.92■■■■□ 3.02
GHDC-205ENST00000585735 ABCC10Q5T3U5 1492 aa33.91■■■■□ 3.02
GHDC-205ENST00000585735 FAM69CQ0P6D2 419 aa33.91■■■■□ 3.02
GHDC-205ENST00000585735 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms