RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 NISCHQ9Y2I1 1504 aa38.25■■■■□ 3.71
SSBP1-214ENST00000498107 CCDC180Q9P1Z9 1646 aa33.93■■■■□ 3.02
SSBP1-214ENST00000498107 ABCC9O60706 1549 aa32.89■■■□□ 2.86
SSBP1-214ENST00000498107 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
SSBP1-214ENST00000498107 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
SSBP1-214ENST00000498107 NACADO15069 1562 aa31.85■■■□□ 2.69
SSBP1-214ENST00000498107 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
SSBP1-214ENST00000498107 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
SSBP1-214ENST00000498107 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.67
SSBP1-214ENST00000498107 UNC13AQ9UPW8 1703 aa31.02■■■□□ 2.56
SSBP1-214ENST00000498107 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
SSBP1-214ENST00000498107 BICRAQ9NZM4 1560 aa30.76■■■□□ 2.52
SSBP1-214ENST00000498107 PABPN1Q86U42 306 aaKnown RBP eCLIP30.76■■■□□ 2.51
SSBP1-214ENST00000498107 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
SSBP1-214ENST00000498107 DNAJC5BQ9UF47 199 aa30.22■■■□□ 2.43
SSBP1-214ENST00000498107 EIF4G1Q04637 1599 aaKnown RBP29.97■■■□□ 2.39
SSBP1-214ENST00000498107 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
SSBP1-214ENST00000498107 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
SSBP1-214ENST00000498107 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
SSBP1-214ENST00000498107 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
SSBP1-214ENST00000498107 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
SSBP1-214ENST00000498107 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
SSBP1-214ENST00000498107 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
SSBP1-214ENST00000498107 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
SSBP1-214ENST00000498107 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
SSBP1-214ENST00000498107 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
SSBP1-214ENST00000498107 RSF1Q96T23 1441 aaPredicted RBP29.22■■■□□ 2.27
SSBP1-214ENST00000498107 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.26
SSBP1-214ENST00000498107 WIZO95785 1651 aa29.14■■■□□ 2.26
SSBP1-214ENST00000498107 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.22
SSBP1-214ENST00000498107 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
SSBP1-214ENST00000498107 LAMC3Q9Y6N6 1575 aa28.57■■■□□ 2.16
SSBP1-214ENST00000498107 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
SSBP1-214ENST00000498107 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
SSBP1-214ENST00000498107 NESP48681 1621 aa28.51■■■□□ 2.15
SSBP1-214ENST00000498107 CFTRP13569 1480 aa28.4■■■□□ 2.14
SSBP1-214ENST00000498107 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
SSBP1-214ENST00000498107 PDS5BQ9NTI5 1447 aa28.39■■■□□ 2.14
SSBP1-214ENST00000498107 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
SSBP1-214ENST00000498107 KIF21AQ7Z4S6 1674 aa28.21■■■□□ 2.11
SSBP1-214ENST00000498107 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
SSBP1-214ENST00000498107 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
SSBP1-214ENST00000498107 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
SSBP1-214ENST00000498107 MRC2Q9UBG0 1479 aa28.05■■■□□ 2.08
SSBP1-214ENST00000498107 CUX2O14529 1486 aa28.01■■■□□ 2.07
SSBP1-214ENST00000498107 WDR62O43379 1518 aa27.93■■■□□ 2.06
SSBP1-214ENST00000498107 ABCC8Q09428 1581 aa27.86■■■□□ 2.05
SSBP1-214ENST00000498107 URB2Q14146 1524 aaKnown RBP27.85■■■□□ 2.05
SSBP1-214ENST00000498107 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
SSBP1-214ENST00000498107 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
SSBP1-214ENST00000498107 DNAJC5Q9H3Z4 198 aa27.64■■■□□ 2.02
SSBP1-214ENST00000498107 CUX1P39880 1505 aa27.61■■■□□ 2.01
SSBP1-214ENST00000498107 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2.011e-7■□□□□ 10.2
SSBP1-214ENST00000498107 IFT140Q96RY7 1462 aa27.56■■■□□ 2
SSBP1-214ENST00000498107 POLA1P09884 1462 aaPredicted RBP27.53■■■□□ 2
SSBP1-214ENST00000498107 FGD5Q6ZNL6 1462 aa27.51■■□□□ 1.99
SSBP1-214ENST00000498107 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
SSBP1-214ENST00000498107 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
SSBP1-214ENST00000498107 SOGA1O94964 1423 aa27.45■■□□□ 1.98
SSBP1-214ENST00000498107 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
SSBP1-214ENST00000498107 TARBP1Q13395 1621 aaKnown RBP27.41■■□□□ 1.98
SSBP1-214ENST00000498107 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
SSBP1-214ENST00000498107 ZNF608Q9ULD9 1512 aaPredicted RBP27.33■■□□□ 1.97
SSBP1-214ENST00000498107 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
SSBP1-214ENST00000498107 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
SSBP1-214ENST00000498107 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
SSBP1-214ENST00000498107 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.954e-9■□□□□ 8.1
SSBP1-214ENST00000498107 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
SSBP1-214ENST00000498107 GAPVD1Q14C86 1478 aa27.14■■□□□ 1.94
SSBP1-214ENST00000498107 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
SSBP1-214ENST00000498107 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
SSBP1-214ENST00000498107 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
SSBP1-214ENST00000498107 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
SSBP1-214ENST00000498107 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
SSBP1-214ENST00000498107 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
SSBP1-214ENST00000498107 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
SSBP1-214ENST00000498107 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
SSBP1-214ENST00000498107 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
SSBP1-214ENST00000498107 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
SSBP1-214ENST00000498107 SYNJ2O15056 1496 aa26.9■■□□□ 1.9
SSBP1-214ENST00000498107 FBLN2P98095 1184 aa26.9■■□□□ 1.9
SSBP1-214ENST00000498107 CHMP7Q8WUX9 453 aaPredicted RBP26.9■■□□□ 1.9
SSBP1-214ENST00000498107 CHD1O14646 1710 aa26.87■■□□□ 1.89
SSBP1-214ENST00000498107 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
SSBP1-214ENST00000498107 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
SSBP1-214ENST00000498107 IGF1RP08069 1367 aa26.83■■□□□ 1.88
SSBP1-214ENST00000498107 CUL7Q14999 1698 aa26.79■■□□□ 1.88
SSBP1-214ENST00000498107 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
SSBP1-214ENST00000498107 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
SSBP1-214ENST00000498107 EEA1Q15075 1411 aa26.71■■□□□ 1.87
SSBP1-214ENST00000498107 CARMIL1Q5VZK9 1371 aa26.7■■□□□ 1.86
SSBP1-214ENST00000498107 NUP160Q12769 1436 aa26.61■■□□□ 1.85
SSBP1-214ENST00000498107 CSRNP3Q8WYN3 585 aa26.59■■□□□ 1.85
SSBP1-214ENST00000498107 CLASP1Q7Z460 1538 aa26.59■■□□□ 1.85
SSBP1-214ENST00000498107 RAPGEF2Q9Y4G8 1499 aa26.57■■□□□ 1.84
SSBP1-214ENST00000498107 CEP170Q5SW79 1584 aa26.56■■□□□ 1.84
SSBP1-214ENST00000498107 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
SSBP1-214ENST00000498107 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
SSBP1-214ENST00000498107 KIAA0586Q9BVV6 1533 aa26.44■■□□□ 1.82
SSBP1-214ENST00000498107 ARHGEF11O15085 1522 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms