RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
ERBB2-203ENST00000445658 CCDC180Q9P1Z9 1646 aa23.27■■□□□ 1.32
ERBB2-203ENST00000445658 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
ERBB2-203ENST00000445658 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.18
ERBB2-203ENST00000445658 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
ERBB2-203ENST00000445658 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.14
ERBB2-203ENST00000445658 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
ERBB2-203ENST00000445658 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
ERBB2-203ENST00000445658 NACADO15069 1562 aa21.49■■□□□ 1.03
ERBB2-203ENST00000445658 ABCC9O60706 1549 aa21.43■■□□□ 1.02
ERBB2-203ENST00000445658 SCRIBQ14160 1630 aa21.31■■□□□ 1
ERBB2-203ENST00000445658 RB1CC1Q8TDY2 1594 aa21.2■□□□□ 0.98
ERBB2-203ENST00000445658 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
ERBB2-203ENST00000445658 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
ERBB2-203ENST00000445658 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
ERBB2-203ENST00000445658 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
ERBB2-203ENST00000445658 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
ERBB2-203ENST00000445658 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
ERBB2-203ENST00000445658 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
ERBB2-203ENST00000445658 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
ERBB2-203ENST00000445658 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.88
ERBB2-203ENST00000445658 HRCP23327 699 aa20.56■□□□□ 0.88
ERBB2-203ENST00000445658 WIZO95785 1651 aa20.55■□□□□ 0.88
ERBB2-203ENST00000445658 SMARCA4P51532 1647 aa20.52■□□□□ 0.87
ERBB2-203ENST00000445658 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
ERBB2-203ENST00000445658 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
ERBB2-203ENST00000445658 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
ERBB2-203ENST00000445658 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
ERBB2-203ENST00000445658 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
ERBB2-203ENST00000445658 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
ERBB2-203ENST00000445658 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.833e-12■□□□□ 11
ERBB2-203ENST00000445658 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
ERBB2-203ENST00000445658 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
ERBB2-203ENST00000445658 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.8
ERBB2-203ENST00000445658 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
ERBB2-203ENST00000445658 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.79
ERBB2-203ENST00000445658 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
ERBB2-203ENST00000445658 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
ERBB2-203ENST00000445658 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
ERBB2-203ENST00000445658 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
ERBB2-203ENST00000445658 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.75
ERBB2-203ENST00000445658 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
ERBB2-203ENST00000445658 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
ERBB2-203ENST00000445658 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.72
ERBB2-203ENST00000445658 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
ERBB2-203ENST00000445658 MYT1Q01538 1121 aa19.57■□□□□ 0.72
ERBB2-203ENST00000445658 EEA1Q15075 1411 aa19.54■□□□□ 0.72
ERBB2-203ENST00000445658 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.71
ERBB2-203ENST00000445658 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
ERBB2-203ENST00000445658 RANGAP1P46060 587 aaPredicted RBP19.49■□□□□ 0.71
ERBB2-203ENST00000445658 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
ERBB2-203ENST00000445658 CFTRP13569 1480 aa19.47■□□□□ 0.71
ERBB2-203ENST00000445658 SOGA1O94964 1423 aa19.45■□□□□ 0.7
ERBB2-203ENST00000445658 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
ERBB2-203ENST00000445658 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
ERBB2-203ENST00000445658 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
ERBB2-203ENST00000445658 KIF21BO75037 1637 aa19.35■□□□□ 0.69
ERBB2-203ENST00000445658 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
ERBB2-203ENST00000445658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
ERBB2-203ENST00000445658 CUX1P39880 1505 aa19.31■□□□□ 0.68
ERBB2-203ENST00000445658 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
ERBB2-203ENST00000445658 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.68
ERBB2-203ENST00000445658 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
ERBB2-203ENST00000445658 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
ERBB2-203ENST00000445658 CCER1Q8TC90 406 aaPredicted RBP19.25■□□□□ 0.67
ERBB2-203ENST00000445658 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
ERBB2-203ENST00000445658 CEP162Q5TB80 1403 aa19.18■□□□□ 0.66
ERBB2-203ENST00000445658 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
ERBB2-203ENST00000445658 LAMC3Q9Y6N6 1575 aa19.11■□□□□ 0.65
ERBB2-203ENST00000445658 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
ERBB2-203ENST00000445658 NEUROD1Q13562 356 aa19.07■□□□□ 0.64
ERBB2-203ENST00000445658 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
ERBB2-203ENST00000445658 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
ERBB2-203ENST00000445658 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
ERBB2-203ENST00000445658 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
ERBB2-203ENST00000445658 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.64
ERBB2-203ENST00000445658 GTF3C3Q9Y5Q9 886 aa19■□□□□ 0.63
ERBB2-203ENST00000445658 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
ERBB2-203ENST00000445658 NESP48681 1621 aa18.97■□□□□ 0.63
ERBB2-203ENST00000445658 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
ERBB2-203ENST00000445658 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
ERBB2-203ENST00000445658 TOPBP1Q92547 1522 aa18.93■□□□□ 0.62
ERBB2-203ENST00000445658 CLIP1P30622 1438 aa18.92■□□□□ 0.62
ERBB2-203ENST00000445658 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
ERBB2-203ENST00000445658 CUX2O14529 1486 aa18.89■□□□□ 0.62
ERBB2-203ENST00000445658 KIF21AQ7Z4S6 1674 aa18.88■□□□□ 0.61
ERBB2-203ENST00000445658 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
ERBB2-203ENST00000445658 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
ERBB2-203ENST00000445658 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
ERBB2-203ENST00000445658 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
ERBB2-203ENST00000445658 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
ERBB2-203ENST00000445658 PDS5BQ9NTI5 1447 aa18.84■□□□□ 0.61
ERBB2-203ENST00000445658 APLP2Q06481 763 aa18.84■□□□□ 0.61
ERBB2-203ENST00000445658 IGF1RP08069 1367 aa18.84■□□□□ 0.61
ERBB2-203ENST00000445658 CUL7Q14999 1698 aa18.79■□□□□ 0.6
ERBB2-203ENST00000445658 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
ERBB2-203ENST00000445658 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
ERBB2-203ENST00000445658 ABCA5Q8WWZ7 1642 aa18.76■□□□□ 0.59
ERBB2-203ENST00000445658 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
ERBB2-203ENST00000445658 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms