RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 AEBP2Q6ZN18 517 aaPredicted RBP19.82■□□□□ 0.76
SSBP1-204ENST00000465167 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
SSBP1-204ENST00000465167 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
SSBP1-204ENST00000465167 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
SSBP1-204ENST00000465167 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
SSBP1-204ENST00000465167 FOXD1Q16676 465 aa15.49■□□□□ 0.07
SSBP1-204ENST00000465167 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
SSBP1-204ENST00000465167 ADRA2BP18089 450 aa15.22■□□□□ 0.03
SSBP1-204ENST00000465167 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
SSBP1-204ENST00000465167 KCNA4P22459 653 aa14.42□□□□□ -0.1
SSBP1-204ENST00000465167 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
SSBP1-204ENST00000465167 NISCHQ9Y2I1 1504 aa14.22□□□□□ -0.13
SSBP1-204ENST00000465167 MSH5O43196 834 aa14.11□□□□□ -0.15
SSBP1-204ENST00000465167 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
SSBP1-204ENST00000465167 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
SSBP1-204ENST00000465167 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
SSBP1-204ENST00000465167 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
SSBP1-204ENST00000465167 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
SSBP1-204ENST00000465167 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
SSBP1-204ENST00000465167 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-204ENST00000465167 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
SSBP1-204ENST00000465167 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-204ENST00000465167 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
SSBP1-204ENST00000465167 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
SSBP1-204ENST00000465167 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-204ENST00000465167 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
SSBP1-204ENST00000465167 ZBTB22O15209 634 aa13.28□□□□□ -0.28
SSBP1-204ENST00000465167 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
SSBP1-204ENST00000465167 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
SSBP1-204ENST00000465167 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
SSBP1-204ENST00000465167 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
SSBP1-204ENST00000465167 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-204ENST00000465167 ABCC9O60706 1549 aa12.77□□□□□ -0.37
SSBP1-204ENST00000465167 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
SSBP1-204ENST00000465167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.385e-6■□□□□ 8.4
SSBP1-204ENST00000465167 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-204ENST00000465167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-204ENST00000465167 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
SSBP1-204ENST00000465167 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-204ENST00000465167 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-204ENST00000465167 APLP2Q06481 763 aa12.23□□□□□ -0.45
SSBP1-204ENST00000465167 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
SSBP1-204ENST00000465167 FKBP8Q14318 412 aa12.18□□□□□ -0.46
SSBP1-204ENST00000465167 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
SSBP1-204ENST00000465167 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
SSBP1-204ENST00000465167 NACADO15069 1562 aa12.11□□□□□ -0.47
SSBP1-204ENST00000465167 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
SSBP1-204ENST00000465167 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
SSBP1-204ENST00000465167 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
SSBP1-204ENST00000465167 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
SSBP1-204ENST00000465167 CAPN15O75808 1086 aa11.95□□□□□ -0.5
SSBP1-204ENST00000465167 POLA2Q14181 598 aa11.91□□□□□ -0.5
SSBP1-204ENST00000465167 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
SSBP1-204ENST00000465167 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
SSBP1-204ENST00000465167 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-204ENST00000465167 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
SSBP1-204ENST00000465167 FBLN2P98095 1184 aa11.84□□□□□ -0.51
SSBP1-204ENST00000465167 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
SSBP1-204ENST00000465167 ZCCHC6Q5VYS8 1495 aaKnown RBP11.78□□□□□ -0.52
SSBP1-204ENST00000465167 ABCB7O75027 752 aa11.78□□□□□ -0.52
SSBP1-204ENST00000465167 AMER1Q5JTC6 1135 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-204ENST00000465167 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
SSBP1-204ENST00000465167 DCAF1Q9Y4B6 1507 aa11.76□□□□□ -0.53
SSBP1-204ENST00000465167 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
SSBP1-204ENST00000465167 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-204ENST00000465167 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
SSBP1-204ENST00000465167 DSG3P32926 999 aa11.69□□□□□ -0.54
SSBP1-204ENST00000465167 PROM2Q8N271 834 aa11.69□□□□□ -0.54
SSBP1-204ENST00000465167 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
SSBP1-204ENST00000465167 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
SSBP1-204ENST00000465167 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
SSBP1-204ENST00000465167 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-204ENST00000465167 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
SSBP1-204ENST00000465167 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
SSBP1-204ENST00000465167 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-204ENST00000465167 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
SSBP1-204ENST00000465167 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-204ENST00000465167 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
SSBP1-204ENST00000465167 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
SSBP1-204ENST00000465167 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
SSBP1-204ENST00000465167 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
SSBP1-204ENST00000465167 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-204ENST00000465167 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
SSBP1-204ENST00000465167 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
SSBP1-204ENST00000465167 KLHL34Q8N239 644 aa11.17□□□□□ -0.62
SSBP1-204ENST00000465167 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
SSBP1-204ENST00000465167 SPOCK2Q92563 424 aa11.15□□□□□ -0.62
SSBP1-204ENST00000465167 MIER1Q8N108 512 aa11.14□□□□□ -0.63
SSBP1-204ENST00000465167 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
SSBP1-204ENST00000465167 PKD2Q13563 968 aa11.13□□□□□ -0.63
SSBP1-204ENST00000465167 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
SSBP1-204ENST00000465167 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
SSBP1-204ENST00000465167 ERCC6Q03468 1493 aa11.11□□□□□ -0.63
SSBP1-204ENST00000465167 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
SSBP1-204ENST00000465167 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
SSBP1-204ENST00000465167 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-204ENST00000465167 ATAD2BQ9ULI0 1458 aa11.09□□□□□ -0.63
SSBP1-204ENST00000465167 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
SSBP1-204ENST00000465167 CUX2O14529 1486 aa11.05□□□□□ -0.64
SSBP1-204ENST00000465167 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms