RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 NISCHQ9Y2I1 1504 aa21.61■■□□□ 1.05
ERBB2-202ENST00000406381 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
ERBB2-202ENST00000406381 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
ERBB2-202ENST00000406381 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.92
ERBB2-202ENST00000406381 PCGF6Q9BYE7 350 aa20.62■□□□□ 0.89
ERBB2-202ENST00000406381 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
ERBB2-202ENST00000406381 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
ERBB2-202ENST00000406381 HRCP23327 699 aa20.21■□□□□ 0.83
ERBB2-202ENST00000406381 MYT1Q01538 1121 aa20.16■□□□□ 0.82
ERBB2-202ENST00000406381 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
ERBB2-202ENST00000406381 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
ERBB2-202ENST00000406381 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
ERBB2-202ENST00000406381 CCER1Q8TC90 406 aaPredicted RBP19.79■□□□□ 0.76
ERBB2-202ENST00000406381 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
ERBB2-202ENST00000406381 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
ERBB2-202ENST00000406381 APLP2Q06481 763 aa19.65■□□□□ 0.74
ERBB2-202ENST00000406381 TRIM41Q8WV44 630 aa19.64■□□□□ 0.73
ERBB2-202ENST00000406381 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
ERBB2-202ENST00000406381 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
ERBB2-202ENST00000406381 YTHDC1Q96MU7 727 aaKnown RBP19.48■□□□□ 0.71
ERBB2-202ENST00000406381 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
ERBB2-202ENST00000406381 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
ERBB2-202ENST00000406381 NEFLP07196 543 aa19.2■□□□□ 0.66
ERBB2-202ENST00000406381 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
ERBB2-202ENST00000406381 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
ERBB2-202ENST00000406381 GTF3C3Q9Y5Q9 886 aa19.07■□□□□ 0.64
ERBB2-202ENST00000406381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-202ENST00000406381 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.64
ERBB2-202ENST00000406381 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
ERBB2-202ENST00000406381 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
ERBB2-202ENST00000406381 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
ERBB2-202ENST00000406381 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
ERBB2-202ENST00000406381 ZNF316A6NFI3 1004 aaPredicted RBP18.66■□□□□ 0.58
ERBB2-202ENST00000406381 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.58
ERBB2-202ENST00000406381 NEUROD1Q13562 356 aa18.59■□□□□ 0.57
ERBB2-202ENST00000406381 ITGAEP38570 1179 aa18.54■□□□□ 0.56
ERBB2-202ENST00000406381 BCANQ96GW7 911 aa18.46■□□□□ 0.55
ERBB2-202ENST00000406381 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-202ENST00000406381 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
ERBB2-202ENST00000406381 DAXXQ9UER7 740 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-202ENST00000406381 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
ERBB2-202ENST00000406381 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
ERBB2-202ENST00000406381 ANP32CO43423 234 aa18.22■□□□□ 0.51
ERBB2-202ENST00000406381 POLR3GLQ9BT43 218 aa18.17■□□□□ 0.5
ERBB2-202ENST00000406381 MIER1Q8N108 512 aa18.13■□□□□ 0.49
ERBB2-202ENST00000406381 FKBP8Q14318 412 aa18.12■□□□□ 0.49
ERBB2-202ENST00000406381 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
ERBB2-202ENST00000406381 CCDC180Q9P1Z9 1646 aa18.1■□□□□ 0.49
ERBB2-202ENST00000406381 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.49
ERBB2-202ENST00000406381 ZCCHC6Q5VYS8 1495 aaKnown RBP18.06■□□□□ 0.48
ERBB2-202ENST00000406381 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
ERBB2-202ENST00000406381 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
ERBB2-202ENST00000406381 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
ERBB2-202ENST00000406381 ABCC9O60706 1549 aa17.96■□□□□ 0.47
ERBB2-202ENST00000406381 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
ERBB2-202ENST00000406381 DDX10Q13206 875 aaKnown RBP17.87■□□□□ 0.45
ERBB2-202ENST00000406381 TRIM52Q96A61 297 aa17.83■□□□□ 0.45
ERBB2-202ENST00000406381 HNRNPUQ00839 825 aaKnown RBP eCLIP17.81■□□□□ 0.44
ERBB2-202ENST00000406381 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.443e-9■□□□□ 10.8
ERBB2-202ENST00000406381 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
ERBB2-202ENST00000406381 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
ERBB2-202ENST00000406381 NBR1Q14596 966 aa17.7■□□□□ 0.42
ERBB2-202ENST00000406381 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
ERBB2-202ENST00000406381 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
ERBB2-202ENST00000406381 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
ERBB2-202ENST00000406381 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
ERBB2-202ENST00000406381 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
ERBB2-202ENST00000406381 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
ERBB2-202ENST00000406381 FAM9BQ8IZU0 186 aa17.6■□□□□ 0.41
ERBB2-202ENST00000406381 CCDC136Q96JN2 1154 aa17.6■□□□□ 0.41
ERBB2-202ENST00000406381 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
ERBB2-202ENST00000406381 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
ERBB2-202ENST00000406381 CLIP1P30622 1438 aa17.54■□□□□ 0.4
ERBB2-202ENST00000406381 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
ERBB2-202ENST00000406381 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
ERBB2-202ENST00000406381 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
ERBB2-202ENST00000406381 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
ERBB2-202ENST00000406381 EEA1Q15075 1411 aa17.49■□□□□ 0.39
ERBB2-202ENST00000406381 MRS2Q9HD23 443 aa17.48■□□□□ 0.39
ERBB2-202ENST00000406381 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
ERBB2-202ENST00000406381 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
ERBB2-202ENST00000406381 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
ERBB2-202ENST00000406381 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
ERBB2-202ENST00000406381 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
ERBB2-202ENST00000406381 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
ERBB2-202ENST00000406381 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
ERBB2-202ENST00000406381 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
ERBB2-202ENST00000406381 NOP58Q9Y2X3 529 aaKnown RBP17.34■□□□□ 0.37
ERBB2-202ENST00000406381 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
ERBB2-202ENST00000406381 DEKP35659 375 aaKnown RBP17.31■□□□□ 0.36
ERBB2-202ENST00000406381 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-202ENST00000406381 UPF2Q9HAU5 1272 aaKnown RBP17.28■□□□□ 0.36
ERBB2-202ENST00000406381 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
ERBB2-202ENST00000406381 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
ERBB2-202ENST00000406381 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
ERBB2-202ENST00000406381 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
ERBB2-202ENST00000406381 ANP32BQ92688 251 aaKnown RBP17.25■□□□□ 0.35
ERBB2-202ENST00000406381 NEFMP07197 916 aa17.23■□□□□ 0.35
ERBB2-202ENST00000406381 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
ERBB2-202ENST00000406381 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms