RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 NISCHQ9Y2I1 1504 aa11.62□□□□□ -0.55
ITGB1-205ENST00000423113 CCDC180Q9P1Z9 1646 aa10.66□□□□□ -0.7
ITGB1-205ENST00000423113 MYO15BQ96JP2 1530 aa9.99□□□□□ -0.81
ITGB1-205ENST00000423113 DCAF1Q9Y4B6 1507 aa9.95□□□□□ -0.82
ITGB1-205ENST00000423113 ZCCHC6Q5VYS8 1495 aaKnown RBP9.81□□□□□ -0.84
ITGB1-205ENST00000423113 NACADO15069 1562 aa9.74□□□□□ -0.85
ITGB1-205ENST00000423113 UNC13AQ9UPW8 1703 aa9.71□□□□□ -0.85
ITGB1-205ENST00000423113 RB1CC1Q8TDY2 1594 aa9.62□□□□□ -0.87
ITGB1-205ENST00000423113 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
ITGB1-205ENST00000423113 ABCC9O60706 1549 aa9.46□□□□□ -0.89
ITGB1-205ENST00000423113 BICRAQ9NZM4 1560 aa9.44□□□□□ -0.9
ITGB1-205ENST00000423113 PEG3Q9GZU2 1588 aa9.21□□□□□ -0.94
ITGB1-205ENST00000423113 SCRIBQ14160 1630 aa9.2□□□□□ -0.94
ITGB1-205ENST00000423113 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
ITGB1-205ENST00000423113 SMARCA2P51531 1590 aa9.05□□□□□ -0.96
ITGB1-205ENST00000423113 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
ITGB1-205ENST00000423113 PRDM2Q13029 1718 aa9.02□□□□□ -0.97
ITGB1-205ENST00000423113 HMGXB3Q12766 1538 aa9.01□□□□□ -0.97
ITGB1-205ENST00000423113 BAZ1AQ9NRL2 1556 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-205ENST00000423113 CC2D2AQ9P2K1 1620 aa8.92□□□□□ -0.98
ITGB1-205ENST00000423113 NCAPD3P42695 1498 aa8.87□□□□□ -0.99
ITGB1-205ENST00000423113 MROH2BQ7Z745 1585 aa8.84□□□□□ -0.99
ITGB1-205ENST00000423113 TOP2AP11388 1531 aaKnown RBP8.84□□□□□ -0.99
ITGB1-205ENST00000423113 WIZO95785 1651 aa8.82□□□□□ -1
ITGB1-205ENST00000423113 CECR2Q9BXF3 1484 aa8.81□□□□□ -1
ITGB1-205ENST00000423113 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
ITGB1-205ENST00000423113 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-205ENST00000423113 LAMC3Q9Y6N6 1575 aa8.71□□□□□ -1.01
ITGB1-205ENST00000423113 BAZ1BQ9UIG0 1483 aaKnown RBP8.65□□□□□ -1.03
ITGB1-205ENST00000423113 THOC2Q8NI27 1593 aaKnown RBP8.62□□□□□ -1.03
ITGB1-205ENST00000423113 WDR97A6NE52 1622 aa8.6□□□□□ -1.03
ITGB1-205ENST00000423113 KIF21AQ7Z4S6 1674 aa8.6□□□□□ -1.03
ITGB1-205ENST00000423113 BIVM-ERCC5R4GMW8 1640 aa8.59□□□□□ -1.03
ITGB1-205ENST00000423113 DCAF8L2P0C7V8 631 aa8.58□□□□□ -1.04
ITGB1-205ENST00000423113 PABPN1Q86U42 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
ITGB1-205ENST00000423113 CFTRP13569 1480 aa8.58□□□□□ -1.04
ITGB1-205ENST00000423113 WDR62O43379 1518 aa8.53□□□□□ -1.04
ITGB1-205ENST00000423113 CCDC88BA6NC98 1476 aa8.52□□□□□ -1.04
ITGB1-205ENST00000423113 DNAJC5BQ9UF47 199 aa8.46□□□□□ -1.05
ITGB1-205ENST00000423113 TOP2BQ02880 1626 aa8.45□□□□□ -1.06
ITGB1-205ENST00000423113 DNMBPQ6XZF7 1577 aa8.45□□□□□ -1.06
ITGB1-205ENST00000423113 TARBP1Q13395 1621 aaKnown RBP8.43□□□□□ -1.06
ITGB1-205ENST00000423113 CADPSQ9ULU8 1353 aa8.42□□□□□ -1.06
ITGB1-205ENST00000423113 ABCC8Q09428 1581 aa8.42□□□□□ -1.06
ITGB1-205ENST00000423113 CUX2O14529 1486 aa8.4□□□□□ -1.06
ITGB1-205ENST00000423113 ABCA5Q8WWZ7 1642 aa8.39□□□□□ -1.07
ITGB1-205ENST00000423113 MRC2Q9UBG0 1479 aa8.36□□□□□ -1.07
ITGB1-205ENST00000423113 PELP1Q8IZL8 1130 aaKnown RBP8.36□□□□□ -1.07
ITGB1-205ENST00000423113 PBRM1Q86U86 1689 aa8.36□□□□□ -1.07
ITGB1-205ENST00000423113 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.07
ITGB1-205ENST00000423113 PDS5BQ9NTI5 1447 aa8.34□□□□□ -1.07
ITGB1-205ENST00000423113 CUX1P39880 1505 aa8.34□□□□□ -1.07
ITGB1-205ENST00000423113 SYNJ1O43426 1573 aa8.34□□□□□ -1.07
ITGB1-205ENST00000423113 FANCD2Q9BXW9 1451 aa8.33□□□□□ -1.08
ITGB1-205ENST00000423113 NESP48681 1621 aa8.33□□□□□ -1.08
ITGB1-205ENST00000423113 CEP164Q9UPV0 1460 aa8.33□□□□□ -1.08
ITGB1-205ENST00000423113 TOPBP1Q92547 1522 aa8.31□□□□□ -1.08
ITGB1-205ENST00000423113 CUL7Q14999 1698 aa8.27□□□□□ -1.09
ITGB1-205ENST00000423113 ABCA10Q8WWZ4 1543 aa8.27□□□□□ -1.09
ITGB1-205ENST00000423113 EIF4G3O43432 1585 aaKnown RBP8.26□□□□□ -1.09
ITGB1-205ENST00000423113 ERICH3Q5RHP9 1530 aa8.23□□□□□ -1.09
ITGB1-205ENST00000423113 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
ITGB1-205ENST00000423113 POLA1P09884 1462 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-205ENST00000423113 SHROOM2Q13796 1616 aa8.21□□□□□ -1.1
ITGB1-205ENST00000423113 ADAMTS12P58397 1594 aa8.21□□□□□ -1.1
ITGB1-205ENST00000423113 CTTNBP2Q8WZ74 1663 aa8.19□□□□□ -1.1
ITGB1-205ENST00000423113 MYT1Q01538 1121 aa8.19□□□□□ -1.1
ITGB1-205ENST00000423113 CHD1O14646 1710 aa8.18□□□□□ -1.1
ITGB1-205ENST00000423113 KIF21BO75037 1637 aa8.17□□□□□ -1.1
ITGB1-205ENST00000423113 FGD5Q6ZNL6 1462 aa8.17□□□□□ -1.1
ITGB1-205ENST00000423113 WRNQ14191 1432 aaPredicted RBP eCLIP8.16□□□□□ -1.1
ITGB1-205ENST00000423113 CLASP1Q7Z460 1538 aa8.14□□□□□ -1.11
ITGB1-205ENST00000423113 MAGI1Q96QZ7 1491 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-205ENST00000423113 RUSC2Q8N2Y8 1516 aa8.11□□□□□ -1.11
ITGB1-205ENST00000423113 ERCC6Q03468 1493 aa8.11□□□□□ -1.11
ITGB1-205ENST00000423113 EEA1Q15075 1411 aa8.09□□□□□ -1.11
ITGB1-205ENST00000423113 SAMD9Q5K651 1589 aa8.06□□□□□ -1.12
ITGB1-205ENST00000423113 GRIN2BQ13224 1484 aa8.05□□□□□ -1.12
ITGB1-205ENST00000423113 PRXQ9BXM0 1461 aa8.05□□□□□ -1.12
ITGB1-205ENST00000423113 NUP160Q12769 1436 aa8.03□□□□□ -1.12
ITGB1-205ENST00000423113 CEP170Q5SW79 1584 aa8.03□□□□□ -1.12
ITGB1-205ENST00000423113 ZNF608Q9ULD9 1512 aaPredicted RBP8.02□□□□□ -1.12
ITGB1-205ENST00000423113 SYNJ2O15056 1496 aa8.02□□□□□ -1.12
ITGB1-205ENST00000423113 GAPVD1Q14C86 1478 aa8.02□□□□□ -1.13
ITGB1-205ENST00000423113 SOGA1O94964 1423 aa8□□□□□ -1.13
ITGB1-205ENST00000423113 RAD54L2Q9Y4B4 1467 aa8□□□□□ -1.13
ITGB1-205ENST00000423113 UGGT2Q9NYU1 1516 aa7.99□□□□□ -1.13
ITGB1-205ENST00000423113 FHAD1B1AJZ9 1412 aa7.98□□□□□ -1.13
ITGB1-205ENST00000423113 GRIN2AQ12879 1464 aa7.98□□□□□ -1.13
ITGB1-205ENST00000423113 KIF27Q86VH2 1401 aa7.96□□□□□ -1.13
ITGB1-205ENST00000423113 SNAPC4Q5SXM2 1469 aa7.96□□□□□ -1.14
ITGB1-205ENST00000423113 EFCAB5A4FU69 1503 aa7.95□□□□□ -1.14
ITGB1-205ENST00000423113 LRRIQ1Q96JM4 1722 aa7.95□□□□□ -1.14
ITGB1-205ENST00000423113 IQGAP2Q13576 1575 aa7.94□□□□□ -1.14
ITGB1-205ENST00000423113 KIAA0556O60303 1618 aa7.92□□□□□ -1.14
ITGB1-205ENST00000423113 HRCP23327 699 aa7.92□□□□□ -1.14
ITGB1-205ENST00000423113 IGF1RP08069 1367 aa7.92□□□□□ -1.14
ITGB1-205ENST00000423113 SUPT5HO00267 1087 aaKnown RBP7.91□□□□□ -1.14
ITGB1-205ENST00000423113 RAPGEF2Q9Y4G8 1499 aa7.91□□□□□ -1.14
ITGB1-205ENST00000423113 KIAA0586Q9BVV6 1533 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms