RNA–Protein interactions for RNA: ENST00000415527.1

SRSF7-203, Transcript of serine and arginine rich splicing factor 7, humanhuman

TSL 5

Gene SRSF7, Length 1,135 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-203ENST00000415527 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
SRSF7-203ENST00000415527 CCDC180Q9P1Z9 1646 aa32.49■■■□□ 2.79
SRSF7-203ENST00000415527 ABCC9O60706 1549 aa32.2■■■□□ 2.74
SRSF7-203ENST00000415527 RB1CC1Q8TDY2 1594 aa30.77■■■□□ 2.52
SRSF7-203ENST00000415527 NACADO15069 1562 aa30.66■■■□□ 2.5
SRSF7-203ENST00000415527 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
SRSF7-203ENST00000415527 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
SRSF7-203ENST00000415527 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
SRSF7-203ENST00000415527 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
SRSF7-203ENST00000415527 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
SRSF7-203ENST00000415527 DNAJC5BQ9UF47 199 aa30.05■■■□□ 2.4
SRSF7-203ENST00000415527 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.48e-6■□□□□ 8.9
SRSF7-203ENST00000415527 BICRAQ9NZM4 1560 aa29.95■■■□□ 2.39
SRSF7-203ENST00000415527 SCRIBQ14160 1630 aa29.6■■■□□ 2.33
SRSF7-203ENST00000415527 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
SRSF7-203ENST00000415527 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.26
SRSF7-203ENST00000415527 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
SRSF7-203ENST00000415527 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
SRSF7-203ENST00000415527 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
SRSF7-203ENST00000415527 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
SRSF7-203ENST00000415527 ATAD2BQ9ULI0 1458 aa28.29■■■□□ 2.12
SRSF7-203ENST00000415527 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
SRSF7-203ENST00000415527 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
SRSF7-203ENST00000415527 HMGXB3Q12766 1538 aa28.14■■■□□ 2.1
SRSF7-203ENST00000415527 PEG3Q9GZU2 1588 aa28.08■■■□□ 2.09
SRSF7-203ENST00000415527 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
SRSF7-203ENST00000415527 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
SRSF7-203ENST00000415527 NESP48681 1621 aa27.78■■■□□ 2.04
SRSF7-203ENST00000415527 ERCC6Q03468 1493 aa27.73■■■□□ 2.03
SRSF7-203ENST00000415527 WIZO95785 1651 aa27.68■■■□□ 2.02
SRSF7-203ENST00000415527 CUX2O14529 1486 aa27.66■■■□□ 2.02
SRSF7-203ENST00000415527 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
SRSF7-203ENST00000415527 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
SRSF7-203ENST00000415527 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
SRSF7-203ENST00000415527 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
SRSF7-203ENST00000415527 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
SRSF7-203ENST00000415527 TOP2AP11388 1531 aaKnown RBP27.37■■□□□ 1.97
SRSF7-203ENST00000415527 KIF21AQ7Z4S6 1674 aa27.37■■□□□ 1.97
SRSF7-203ENST00000415527 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
SRSF7-203ENST00000415527 CFTRP13569 1480 aa27.25■■□□□ 1.95
SRSF7-203ENST00000415527 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
SRSF7-203ENST00000415527 WDR62O43379 1518 aa27.15■■□□□ 1.94
SRSF7-203ENST00000415527 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
SRSF7-203ENST00000415527 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
SRSF7-203ENST00000415527 CCDC88BA6NC98 1476 aa27.07■■□□□ 1.92
SRSF7-203ENST00000415527 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
SRSF7-203ENST00000415527 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
SRSF7-203ENST00000415527 TOPBP1Q92547 1522 aa26.67■■□□□ 1.86
SRSF7-203ENST00000415527 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
SRSF7-203ENST00000415527 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
SRSF7-203ENST00000415527 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
SRSF7-203ENST00000415527 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
SRSF7-203ENST00000415527 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
SRSF7-203ENST00000415527 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
SRSF7-203ENST00000415527 POLA1P09884 1462 aaPredicted RBP26.42■■□□□ 1.82
SRSF7-203ENST00000415527 OSCARQ8IYS5 282 aa26.42■■□□□ 1.82
SRSF7-203ENST00000415527 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
SRSF7-203ENST00000415527 CUX1P39880 1505 aa26.34■■□□□ 1.81
SRSF7-203ENST00000415527 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.82e-7■■■■□ 22.5
SRSF7-203ENST00000415527 RAD54L2Q9Y4B4 1467 aa26.31■■□□□ 1.8
SRSF7-203ENST00000415527 SOGA1O94964 1423 aa26.28■■□□□ 1.8
SRSF7-203ENST00000415527 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
SRSF7-203ENST00000415527 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
SRSF7-203ENST00000415527 WDR97A6NE52 1622 aa26.16■■□□□ 1.78
SRSF7-203ENST00000415527 TRIM41Q8WV44 630 aa26.14■■□□□ 1.78
SRSF7-203ENST00000415527 CHD1O14646 1710 aa26.08■■□□□ 1.77
SRSF7-203ENST00000415527 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
SRSF7-203ENST00000415527 RIMBP3CA6NJZ7 1639 aa26.04■■□□□ 1.76
SRSF7-203ENST00000415527 RIMBP3BA6NNM3 1639 aa26.04■■□□□ 1.76
SRSF7-203ENST00000415527 RIMBP3Q9UFD9 1639 aa26.04■■□□□ 1.76
SRSF7-203ENST00000415527 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
SRSF7-203ENST00000415527 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
SRSF7-203ENST00000415527 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
SRSF7-203ENST00000415527 MAGI1Q96QZ7 1491 aaPredicted RBP26■■□□□ 1.75
SRSF7-203ENST00000415527 FBLN2P98095 1184 aa25.99■■□□□ 1.75
SRSF7-203ENST00000415527 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.758e-7■■□□□ 13.9
SRSF7-203ENST00000415527 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
SRSF7-203ENST00000415527 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
SRSF7-203ENST00000415527 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
SRSF7-203ENST00000415527 ABCA5Q8WWZ7 1642 aa25.95■■□□□ 1.74
SRSF7-203ENST00000415527 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
SRSF7-203ENST00000415527 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
SRSF7-203ENST00000415527 PBRM1Q86U86 1689 aa25.9■■□□□ 1.74
SRSF7-203ENST00000415527 CHMP7Q8WUX9 453 aaPredicted RBP25.88■■□□□ 1.73
SRSF7-203ENST00000415527 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
SRSF7-203ENST00000415527 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
SRSF7-203ENST00000415527 CYB5RLQ6IPT4 315 aa25.76■■□□□ 1.71
SRSF7-203ENST00000415527 ADAMTS12P58397 1594 aa25.72■■□□□ 1.71
SRSF7-203ENST00000415527 GRIN2AQ12879 1464 aa25.7■■□□□ 1.7
SRSF7-203ENST00000415527 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
SRSF7-203ENST00000415527 FHAD1B1AJZ9 1412 aa25.66■■□□□ 1.7
SRSF7-203ENST00000415527 NUP160Q12769 1436 aa25.65■■□□□ 1.7
SRSF7-203ENST00000415527 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
SRSF7-203ENST00000415527 ERCC6L2Q5T890 1561 aa25.49■■□□□ 1.67
SRSF7-203ENST00000415527 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
SRSF7-203ENST00000415527 IGF1RP08069 1367 aa25.46■■□□□ 1.67
SRSF7-203ENST00000415527 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
SRSF7-203ENST00000415527 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
SRSF7-203ENST00000415527 JPH4Q96JJ6 628 aa25.33■■□□□ 1.65
SRSF7-203ENST00000415527 CUL7Q14999 1698 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms