RNA–Protein interactions for RNA: ENST00000482405.7

CD99-208, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 2

Gene CD99, Length 842 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-208ENST00000482405 NISCHQ9Y2I1 1504 aa51.03■■■■■ 5.76
CD99-208ENST00000482405 CCDC180Q9P1Z9 1646 aa45.36■■■■■ 4.85
CD99-208ENST00000482405 ABCC9O60706 1549 aa44.45■■■■■ 4.71
CD99-208ENST00000482405 RB1CC1Q8TDY2 1594 aa42.73■■■■■ 4.43
CD99-208ENST00000482405 NACADO15069 1562 aa42.7■■■■■ 4.43
CD99-208ENST00000482405 DCAF8L2P0C7V8 631 aa42.54■■■■■ 4.4
CD99-208ENST00000482405 ZCCHC6Q5VYS8 1495 aaKnown RBP42.5■■■■■ 4.39
CD99-208ENST00000482405 MYO15BQ96JP2 1530 aa42.5■■■■■ 4.39
CD99-208ENST00000482405 DCAF1Q9Y4B6 1507 aa42.26■■■■■ 4.36
CD99-208ENST00000482405 UNC13AQ9UPW8 1703 aa41.71■■■■■ 4.27
CD99-208ENST00000482405 PABPN1Q86U42 306 aaKnown RBP eCLIP41.53■■■■■ 4.244e-8■■■■■ 30
CD99-208ENST00000482405 BICRAQ9NZM4 1560 aa41.5■■■■■ 4.23
CD99-208ENST00000482405 SCRIBQ14160 1630 aa41.33■■■■■ 4.21
CD99-208ENST00000482405 SHROOM4Q9ULL8 1493 aa41.09■■■■■ 4.17
CD99-208ENST00000482405 DNAJC5BQ9UF47 199 aa40.96■■■■■ 4.15
CD99-208ENST00000482405 EIF4G1Q04637 1599 aaKnown RBP40.38■■■■■ 4.05
CD99-208ENST00000482405 CC2D2AQ9P2K1 1620 aa40.22■■■■■ 4.03
CD99-208ENST00000482405 CECR2Q9BXF3 1484 aa39.98■■■■□ 3.99
CD99-208ENST00000482405 SMARCA4P51532 1647 aa39.58■■■■□ 3.93
CD99-208ENST00000482405 BAZ1AQ9NRL2 1556 aaPredicted RBP39.54■■■■□ 3.92
CD99-208ENST00000482405 NCAPD3P42695 1498 aa39.45■■■■□ 3.91
CD99-208ENST00000482405 ATAD2BQ9ULI0 1458 aa39.43■■■■□ 3.9
CD99-208ENST00000482405 SMARCA2P51531 1590 aa39.34■■■■□ 3.89
CD99-208ENST00000482405 MROH2BQ7Z745 1585 aa39.31■■■■□ 3.88
CD99-208ENST00000482405 PEG3Q9GZU2 1588 aa39.26■■■■□ 3.88
CD99-208ENST00000482405 HMGXB3Q12766 1538 aa39.21■■■■□ 3.87
CD99-208ENST00000482405 BAZ1BQ9UIG0 1483 aaKnown RBP39.05■■■■□ 3.84
CD99-208ENST00000482405 RSF1Q96T23 1441 aaPredicted RBP38.86■■■■□ 3.81
CD99-208ENST00000482405 WIZO95785 1651 aa38.84■■■■□ 3.81
CD99-208ENST00000482405 NESP48681 1621 aa38.46■■■■□ 3.75
CD99-208ENST00000482405 TOP2AP11388 1531 aaKnown RBP38.46■■■■□ 3.75
CD99-208ENST00000482405 LAMC3Q9Y6N6 1575 aa38.36■■■■□ 3.73
CD99-208ENST00000482405 ERCC6Q03468 1493 aa38.29■■■■□ 3.72
CD99-208ENST00000482405 CADPSQ9ULU8 1353 aa38.28■■■■□ 3.72
CD99-208ENST00000482405 PDS5BQ9NTI5 1447 aa38.12■■■■□ 3.69
CD99-208ENST00000482405 CFTRP13569 1480 aa38.04■■■■□ 3.68
CD99-208ENST00000482405 CCDC88BA6NC98 1476 aa38.02■■■■□ 3.68
CD99-208ENST00000482405 CUX2O14529 1486 aa38■■■■□ 3.67
CD99-208ENST00000482405 KIF21AQ7Z4S6 1674 aa37.95■■■■□ 3.66
CD99-208ENST00000482405 THOC2Q8NI27 1593 aaKnown RBP37.91■■■■□ 3.66
CD99-208ENST00000482405 FANCD2Q9BXW9 1451 aa37.8■■■■□ 3.64
CD99-208ENST00000482405 CEP164Q9UPV0 1460 aa37.74■■■■□ 3.63
CD99-208ENST00000482405 MRC2Q9UBG0 1479 aa37.72■■■■□ 3.63
CD99-208ENST00000482405 SUPT5HO00267 1087 aaKnown RBP37.7■■■■□ 3.63
CD99-208ENST00000482405 WDR62O43379 1518 aa37.62■■■■□ 3.61
CD99-208ENST00000482405 PRDM2Q13029 1718 aa37.61■■■■□ 3.61
CD99-208ENST00000482405 URB2Q14146 1524 aaKnown RBP37.44■■■■□ 3.58
CD99-208ENST00000482405 TOPBP1Q92547 1522 aa37.2■■■■□ 3.55
CD99-208ENST00000482405 ABCC8Q09428 1581 aa37.19■■■■□ 3.54
CD99-208ENST00000482405 DNMBPQ6XZF7 1577 aa37.12■■■■□ 3.53
CD99-208ENST00000482405 IFT140Q96RY7 1462 aa36.99■■■■□ 3.51
CD99-208ENST00000482405 DNAJC5Q9H3Z4 198 aa36.95■■■■□ 3.51
CD99-208ENST00000482405 CUX1P39880 1505 aa36.88■■■■□ 3.49
CD99-208ENST00000482405 POLA1P09884 1462 aaPredicted RBP36.88■■■■□ 3.49
CD99-208ENST00000482405 ZNF608Q9ULD9 1512 aaPredicted RBP36.82■■■■□ 3.48
CD99-208ENST00000482405 TARBP1Q13395 1621 aaKnown RBP36.79■■■■□ 3.48
CD99-208ENST00000482405 FGD5Q6ZNL6 1462 aa36.75■■■■□ 3.47
CD99-208ENST00000482405 SOGA1O94964 1423 aa36.71■■■■□ 3.47
CD99-208ENST00000482405 RAD54L2Q9Y4B4 1467 aa36.7■■■■□ 3.47
CD99-208ENST00000482405 EIF4G3O43432 1585 aaKnown RBP36.63■■■■□ 3.45
CD99-208ENST00000482405 WRNQ14191 1432 aaPredicted RBP eCLIP36.6■■■■□ 3.45
CD99-208ENST00000482405 AQRO60306 1485 aaKnown RBP eCLIP36.6■■■■□ 3.457e-6■■□□□ 13.1
CD99-208ENST00000482405 TOP2BQ02880 1626 aa36.53■■■■□ 3.44
CD99-208ENST00000482405 WDR97A6NE52 1622 aa36.52■■■■□ 3.44
CD99-208ENST00000482405 BIVM-ERCC5R4GMW8 1640 aa36.52■■■■□ 3.44
CD99-208ENST00000482405 TDRD9Q8NDG6 1382 aaKnown RBP36.51■■■■□ 3.43
CD99-208ENST00000482405 SYNJ1O43426 1573 aa36.5■■■■□ 3.43
CD99-208ENST00000482405 ABCA10Q8WWZ4 1543 aa36.44■■■■□ 3.42
CD99-208ENST00000482405 OSCARQ8IYS5 282 aa36.39■■■■□ 3.42
CD99-208ENST00000482405 GRIN2BQ13224 1484 aa36.3■■■■□ 3.4
CD99-208ENST00000482405 GAPVD1Q14C86 1478 aa36.28■■■■□ 3.4
CD99-208ENST00000482405 ABCA5Q8WWZ7 1642 aa36.26■■■■□ 3.4
CD99-208ENST00000482405 SNAPC4Q5SXM2 1469 aa36.24■■■■□ 3.39
CD99-208ENST00000482405 MAGI1Q96QZ7 1491 aaPredicted RBP36.22■■■■□ 3.39
CD99-208ENST00000482405 PBRM1Q86U86 1689 aa36.14■■■■□ 3.38
CD99-208ENST00000482405 CHD1O14646 1710 aa36.14■■■■□ 3.38
CD99-208ENST00000482405 FBLN2P98095 1184 aa36.09■■■■□ 3.37
CD99-208ENST00000482405 SYNJ2O15056 1496 aa36.08■■■■□ 3.37
CD99-208ENST00000482405 CHMP7Q8WUX9 453 aaPredicted RBP36.03■■■■□ 3.36
CD99-208ENST00000482405 ERICH3Q5RHP9 1530 aa35.98■■■■□ 3.35
CD99-208ENST00000482405 ADAMTS12P58397 1594 aa35.91■■■■□ 3.34
CD99-208ENST00000482405 FHAD1B1AJZ9 1412 aa35.88■■■■□ 3.33
CD99-208ENST00000482405 CLASP1Q7Z460 1538 aa35.85■■■■□ 3.33
CD99-208ENST00000482405 KIF27Q86VH2 1401 aa35.84■■■■□ 3.33
CD99-208ENST00000482405 GRIN2AQ12879 1464 aa35.83■■■■□ 3.33
CD99-208ENST00000482405 ARHGEF11O15085 1522 aa35.8■■■■□ 3.32
CD99-208ENST00000482405 RIMBP3CA6NJZ7 1639 aa35.78■■■■□ 3.32
CD99-208ENST00000482405 RIMBP3BA6NNM3 1639 aa35.78■■■■□ 3.32
CD99-208ENST00000482405 RIMBP3Q9UFD9 1639 aa35.78■■■■□ 3.32
CD99-208ENST00000482405 IGF1RP08069 1367 aa35.76■■■■□ 3.31
CD99-208ENST00000482405 NUP160Q12769 1436 aa35.72■■■■□ 3.31
CD99-208ENST00000482405 CEP170Q5SW79 1584 aa35.65■■■■□ 3.3
CD99-208ENST00000482405 TRIM41Q8WV44 630 aa35.63■■■■□ 3.29
CD99-208ENST00000482405 CUL7Q14999 1698 aa35.59■■■■□ 3.29
CD99-208ENST00000482405 ARAP1Q96P48 1450 aa35.52■■■■□ 3.28
CD99-208ENST00000482405 CARMIL1Q5VZK9 1371 aa35.51■■■■□ 3.28
CD99-208ENST00000482405 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
CD99-208ENST00000482405 CYB5RLQ6IPT4 315 aa35.44■■■■□ 3.26
CD99-208ENST00000482405 SHROOM2Q13796 1616 aa35.43■■■■□ 3.26
CD99-208ENST00000482405 KIAA0586Q9BVV6 1533 aa35.33■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms