RNA–Protein interactions for RNA: ENST00000493483.5

PHC2-212, Transcript of polyhomeotic homolog 2, humanhuman

TSL 3

Gene PHC2, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC2-212ENST00000493483 NISCHQ9Y2I1 1504 aa57.04■■■■■ 6.72
PHC2-212ENST00000493483 CCDC180Q9P1Z9 1646 aa50.75■■■■■ 5.71
PHC2-212ENST00000493483 ABCC9O60706 1549 aa49.5■■■■■ 5.52
PHC2-212ENST00000493483 RB1CC1Q8TDY2 1594 aa47.79■■■■■ 5.24
PHC2-212ENST00000493483 NACADO15069 1562 aa47.75■■■■■ 5.24
PHC2-212ENST00000493483 DCAF8L2P0C7V8 631 aa47.71■■■■■ 5.23
PHC2-212ENST00000493483 MYO15BQ96JP2 1530 aa47.51■■■■■ 5.2
PHC2-212ENST00000493483 ZCCHC6Q5VYS8 1495 aaKnown RBP47.51■■■■■ 5.2
PHC2-212ENST00000493483 DCAF1Q9Y4B6 1507 aa47.3■■■■■ 5.16
PHC2-212ENST00000493483 UNC13AQ9UPW8 1703 aa46.48■■■■■ 5.03
PHC2-212ENST00000493483 PABPN1Q86U42 306 aaKnown RBP eCLIP46.26■■■■■ 5
PHC2-212ENST00000493483 SCRIBQ14160 1630 aa46.18■■■■■ 4.98
PHC2-212ENST00000493483 BICRAQ9NZM4 1560 aa46.13■■■■■ 4.98
PHC2-212ENST00000493483 SHROOM4Q9ULL8 1493 aa45.95■■■■■ 4.95
PHC2-212ENST00000493483 DNAJC5BQ9UF47 199 aa45.27■■■■■ 4.84
PHC2-212ENST00000493483 EIF4G1Q04637 1599 aaKnown RBP45.01■■■■■ 4.8
PHC2-212ENST00000493483 CC2D2AQ9P2K1 1620 aa44.8■■■■■ 4.76
PHC2-212ENST00000493483 CECR2Q9BXF3 1484 aa44.55■■■■■ 4.72
PHC2-212ENST00000493483 BAZ1AQ9NRL2 1556 aaPredicted RBP44.29■■■■■ 4.68
PHC2-212ENST00000493483 SMARCA4P51532 1647 aa44.23■■■■■ 4.67
PHC2-212ENST00000493483 SMARCA2P51531 1590 aa44.05■■■■■ 4.64
PHC2-212ENST00000493483 NCAPD3P42695 1498 aa44.02■■■■■ 4.64
PHC2-212ENST00000493483 ATAD2BQ9ULI0 1458 aa44.01■■■■■ 4.64
PHC2-212ENST00000493483 MROH2BQ7Z745 1585 aa43.88■■■■■ 4.61
PHC2-212ENST00000493483 PEG3Q9GZU2 1588 aa43.84■■■■■ 4.61
PHC2-212ENST00000493483 HMGXB3Q12766 1538 aa43.82■■■■■ 4.61
PHC2-212ENST00000493483 BAZ1BQ9UIG0 1483 aaKnown RBP43.7■■■■■ 4.59
PHC2-212ENST00000493483 RSF1Q96T23 1441 aaPredicted RBP43.45■■■■■ 4.55
PHC2-212ENST00000493483 WIZO95785 1651 aa43.4■■■■■ 4.54
PHC2-212ENST00000493483 TOP2AP11388 1531 aaKnown RBP43.05■■■■■ 4.48
PHC2-212ENST00000493483 LAMC3Q9Y6N6 1575 aa42.88■■■■■ 4.45
PHC2-212ENST00000493483 ERCC6Q03468 1493 aa42.81■■■■■ 4.44
PHC2-212ENST00000493483 NESP48681 1621 aa42.78■■■■■ 4.44
PHC2-212ENST00000493483 CADPSQ9ULU8 1353 aa42.77■■■■■ 4.44
PHC2-212ENST00000493483 PDS5BQ9NTI5 1447 aa42.66■■■■■ 4.42
PHC2-212ENST00000493483 CCDC88BA6NC98 1476 aa42.5■■■■■ 4.39
PHC2-212ENST00000493483 CFTRP13569 1480 aa42.49■■■■■ 4.39
PHC2-212ENST00000493483 SUPT5HO00267 1087 aaKnown RBP42.42■■■■■ 4.38
PHC2-212ENST00000493483 CUX2O14529 1486 aa42.36■■■■■ 4.37
PHC2-212ENST00000493483 KIF21AQ7Z4S6 1674 aa42.31■■■■■ 4.36
PHC2-212ENST00000493483 FANCD2Q9BXW9 1451 aa42.23■■■■■ 4.35
PHC2-212ENST00000493483 CEP164Q9UPV0 1460 aa42.21■■■■■ 4.35
PHC2-212ENST00000493483 THOC2Q8NI27 1593 aaKnown RBP42.18■■■■■ 4.34
PHC2-212ENST00000493483 PRDM2Q13029 1718 aa42.15■■■■■ 4.34
PHC2-212ENST00000493483 MRC2Q9UBG0 1479 aa42.12■■■■■ 4.33
PHC2-212ENST00000493483 WDR62O43379 1518 aa41.95■■■■■ 4.31
PHC2-212ENST00000493483 ABCC8Q09428 1581 aa41.73■■■■■ 4.27
PHC2-212ENST00000493483 URB2Q14146 1524 aaKnown RBP41.71■■■■■ 4.27
PHC2-212ENST00000493483 TOPBP1Q92547 1522 aa41.54■■■■■ 4.24
PHC2-212ENST00000493483 DNMBPQ6XZF7 1577 aa41.52■■■■■ 4.24
PHC2-212ENST00000493483 IFT140Q96RY7 1462 aa41.34■■■■■ 4.21
PHC2-212ENST00000493483 CUX1P39880 1505 aa41.18■■■■■ 4.18
PHC2-212ENST00000493483 POLA1P09884 1462 aaPredicted RBP41.17■■■■■ 4.18
PHC2-212ENST00000493483 FGD5Q6ZNL6 1462 aa41.09■■■■■ 4.17
PHC2-212ENST00000493483 SOGA1O94964 1423 aa41.08■■■■■ 4.17
PHC2-212ENST00000493483 WRNQ14191 1432 aaPredicted RBP eCLIP41.04■■■■■ 4.16
PHC2-212ENST00000493483 TARBP1Q13395 1621 aaKnown RBP41.02■■■■■ 4.16
PHC2-212ENST00000493483 ZNF608Q9ULD9 1512 aaPredicted RBP40.98■■■■■ 4.15
PHC2-212ENST00000493483 DNAJC5Q9H3Z4 198 aa40.95■■■■■ 4.15
PHC2-212ENST00000493483 RAD54L2Q9Y4B4 1467 aa40.94■■■■■ 4.14
PHC2-212ENST00000493483 TOP2BQ02880 1626 aa40.91■■■■■ 4.14
PHC2-212ENST00000493483 WDR97A6NE52 1622 aa40.9■■■■■ 4.14
PHC2-212ENST00000493483 BIVM-ERCC5R4GMW8 1640 aa40.88■■■■■ 4.13
PHC2-212ENST00000493483 EIF4G3O43432 1585 aaKnown RBP40.87■■■■■ 4.13
PHC2-212ENST00000493483 AQRO60306 1485 aaKnown RBP eCLIP40.82■■■■■ 4.122e-7■■■■■ 33.7
PHC2-212ENST00000493483 SYNJ1O43426 1573 aa40.79■■■■■ 4.12
PHC2-212ENST00000493483 TDRD9Q8NDG6 1382 aaKnown RBP40.76■■■■■ 4.12
PHC2-212ENST00000493483 ABCA10Q8WWZ4 1543 aa40.74■■■■■ 4.11
PHC2-212ENST00000493483 OSCARQ8IYS5 282 aa40.65■■■■■ 4.1
PHC2-212ENST00000493483 GRIN2BQ13224 1484 aa40.61■■■■■ 4.09
PHC2-212ENST00000493483 GAPVD1Q14C86 1478 aa40.6■■■■■ 4.09
PHC2-212ENST00000493483 MAGI1Q96QZ7 1491 aaPredicted RBP40.51■■■■■ 4.08
PHC2-212ENST00000493483 ABCA5Q8WWZ7 1642 aa40.5■■■■■ 4.07
PHC2-212ENST00000493483 SNAPC4Q5SXM2 1469 aa40.46■■■■■ 4.07
PHC2-212ENST00000493483 FBLN2P98095 1184 aa40.43■■■■■ 4.06
PHC2-212ENST00000493483 PBRM1Q86U86 1689 aa40.43■■■■■ 4.06
PHC2-212ENST00000493483 CHMP7Q8WUX9 453 aaPredicted RBP40.38■■■■■ 4.05
PHC2-212ENST00000493483 SYNJ2O15056 1496 aa40.32■■■■■ 4.05
PHC2-212ENST00000493483 CHD1O14646 1710 aa40.32■■■■■ 4.05
PHC2-212ENST00000493483 ERICH3Q5RHP9 1530 aa40.29■■■■■ 4.04
PHC2-212ENST00000493483 KIF27Q86VH2 1401 aa40.25■■■■■ 4.03
PHC2-212ENST00000493483 TRIM41Q8WV44 630 aa40.18■■■■■ 4.02
PHC2-212ENST00000493483 FHAD1B1AJZ9 1412 aa40.16■■■■■ 4.02
PHC2-212ENST00000493483 ADAMTS12P58397 1594 aa40.12■■■■■ 4.01
PHC2-212ENST00000493483 GRIN2AQ12879 1464 aa40.04■■■■■ 4
PHC2-212ENST00000493483 IGF1RP08069 1367 aa39.98■■■■□ 3.99
PHC2-212ENST00000493483 CUL7Q14999 1698 aa39.92■■■■□ 3.98
PHC2-212ENST00000493483 CLASP1Q7Z460 1538 aa39.91■■■■□ 3.98
PHC2-212ENST00000493483 NUP160Q12769 1436 aa39.86■■■■□ 3.97
PHC2-212ENST00000493483 ARHGEF11O15085 1522 aa39.85■■■■□ 3.97
PHC2-212ENST00000493483 CARMIL1Q5VZK9 1371 aa39.81■■■■□ 3.96
PHC2-212ENST00000493483 RIMBP3CA6NJZ7 1639 aa39.8■■■■□ 3.96
PHC2-212ENST00000493483 RIMBP3BA6NNM3 1639 aa39.8■■■■□ 3.96
PHC2-212ENST00000493483 RIMBP3Q9UFD9 1639 aa39.8■■■■□ 3.96
PHC2-212ENST00000493483 CEP170Q5SW79 1584 aa39.74■■■■□ 3.95
PHC2-212ENST00000493483 RUSC2Q8N2Y8 1516 aa39.64■■■■□ 3.94
PHC2-212ENST00000493483 CHIC1Q5VXU3 224 aa39.59■■■■□ 3.93
PHC2-212ENST00000493483 RAPGEF2Q9Y4G8 1499 aa39.58■■■■□ 3.93
PHC2-212ENST00000493483 EEA1Q15075 1411 aa39.57■■■■□ 3.93
PHC2-212ENST00000493483 KIAA0586Q9BVV6 1533 aa39.54■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms