RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
ERBB2-201ENST00000269571 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
ERBB2-201ENST00000269571 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
ERBB2-201ENST00000269571 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
ERBB2-201ENST00000269571 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
ERBB2-201ENST00000269571 MYT1Q01538 1121 aa19.65■□□□□ 0.74
ERBB2-201ENST00000269571 PCGF6Q9BYE7 350 aa19.54■□□□□ 0.72
ERBB2-201ENST00000269571 EHMT2Q96KQ7 1210 aa19.49■□□□□ 0.71
ERBB2-201ENST00000269571 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
ERBB2-201ENST00000269571 HRCP23327 699 aa18.92■□□□□ 0.62
ERBB2-201ENST00000269571 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
ERBB2-201ENST00000269571 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
ERBB2-201ENST00000269571 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
ERBB2-201ENST00000269571 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
ERBB2-201ENST00000269571 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
ERBB2-201ENST00000269571 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
ERBB2-201ENST00000269571 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
ERBB2-201ENST00000269571 APLP2Q06481 763 aa18.46■□□□□ 0.55
ERBB2-201ENST00000269571 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
ERBB2-201ENST00000269571 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
ERBB2-201ENST00000269571 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
ERBB2-201ENST00000269571 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.52
ERBB2-201ENST00000269571 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
ERBB2-201ENST00000269571 ABCC9O60706 1549 aa18.09■□□□□ 0.49
ERBB2-201ENST00000269571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
ERBB2-201ENST00000269571 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
ERBB2-201ENST00000269571 GTF3C3Q9Y5Q9 886 aa17.99■□□□□ 0.47
ERBB2-201ENST00000269571 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
ERBB2-201ENST00000269571 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
ERBB2-201ENST00000269571 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
ERBB2-201ENST00000269571 NEFLP07196 543 aa17.86■□□□□ 0.45
ERBB2-201ENST00000269571 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.453e-9■□□□□ 10.8
ERBB2-201ENST00000269571 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
ERBB2-201ENST00000269571 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
ERBB2-201ENST00000269571 ITGAEP38570 1179 aa17.67■□□□□ 0.42
ERBB2-201ENST00000269571 BCANQ96GW7 911 aa17.6■□□□□ 0.41
ERBB2-201ENST00000269571 NEUROD1Q13562 356 aa17.58■□□□□ 0.4
ERBB2-201ENST00000269571 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
ERBB2-201ENST00000269571 CNGB1Q14028 1251 aaPredicted RBP17.44■□□□□ 0.38
ERBB2-201ENST00000269571 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
ERBB2-201ENST00000269571 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
ERBB2-201ENST00000269571 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
ERBB2-201ENST00000269571 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
ERBB2-201ENST00000269571 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.36
ERBB2-201ENST00000269571 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
ERBB2-201ENST00000269571 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
ERBB2-201ENST00000269571 ANP32EQ9BTT0 268 aa17.22■□□□□ 0.35
ERBB2-201ENST00000269571 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
ERBB2-201ENST00000269571 MIER1Q8N108 512 aa17.13■□□□□ 0.33
ERBB2-201ENST00000269571 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
ERBB2-201ENST00000269571 FKBP8Q14318 412 aa17.07■□□□□ 0.32
ERBB2-201ENST00000269571 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
ERBB2-201ENST00000269571 CDK11AQ9UQ88 783 aaPredicted RBP17.03■□□□□ 0.32
ERBB2-201ENST00000269571 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.31
ERBB2-201ENST00000269571 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
ERBB2-201ENST00000269571 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
ERBB2-201ENST00000269571 ANP32CO43423 234 aa16.99■□□□□ 0.31
ERBB2-201ENST00000269571 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
ERBB2-201ENST00000269571 DDX10Q13206 875 aaKnown RBP16.89■□□□□ 0.29
ERBB2-201ENST00000269571 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
ERBB2-201ENST00000269571 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
ERBB2-201ENST00000269571 FBLN2P98095 1184 aa16.86■□□□□ 0.29
ERBB2-201ENST00000269571 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
ERBB2-201ENST00000269571 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
ERBB2-201ENST00000269571 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
ERBB2-201ENST00000269571 NACADO15069 1562 aa16.78■□□□□ 0.28
ERBB2-201ENST00000269571 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-201ENST00000269571 NBR1Q14596 966 aa16.77■□□□□ 0.27
ERBB2-201ENST00000269571 GLIPR1L2Q4G1C9 344 aa16.77■□□□□ 0.27
ERBB2-201ENST00000269571 NPM2Q86SE8 214 aaKnown RBP16.77■□□□□ 0.27
ERBB2-201ENST00000269571 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
ERBB2-201ENST00000269571 ARID3CA6NKF2 412 aa16.75■□□□□ 0.27
ERBB2-201ENST00000269571 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
ERBB2-201ENST00000269571 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-201ENST00000269571 ZNF326Q5BKZ1 582 aaKnown RBP16.74■□□□□ 0.27
ERBB2-201ENST00000269571 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
ERBB2-201ENST00000269571 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
ERBB2-201ENST00000269571 SUPT16HQ9Y5B9 1047 aaKnown RBP16.66■□□□□ 0.26
ERBB2-201ENST00000269571 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
ERBB2-201ENST00000269571 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
ERBB2-201ENST00000269571 SENP3-EIF4A1A0A087X0R7 540 aa16.53■□□□□ 0.24
ERBB2-201ENST00000269571 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
ERBB2-201ENST00000269571 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
ERBB2-201ENST00000269571 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
ERBB2-201ENST00000269571 DEKP35659 375 aaKnown RBP16.49■□□□□ 0.23
ERBB2-201ENST00000269571 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-201ENST00000269571 CCDC136Q96JN2 1154 aa16.48■□□□□ 0.23
ERBB2-201ENST00000269571 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
ERBB2-201ENST00000269571 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
ERBB2-201ENST00000269571 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
ERBB2-201ENST00000269571 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
ERBB2-201ENST00000269571 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
ERBB2-201ENST00000269571 ZNF777Q9ULD5 760 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-201ENST00000269571 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
ERBB2-201ENST00000269571 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
ERBB2-201ENST00000269571 ARXQ96QS3 562 aa16.38■□□□□ 0.21
ERBB2-201ENST00000269571 CLIP1P30622 1438 aa16.36■□□□□ 0.21
ERBB2-201ENST00000269571 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.35■□□□□ 0.21
ERBB2-201ENST00000269571 CHIC2Q9UKJ5 165 aa16.34■□□□□ 0.21
ERBB2-201ENST00000269571 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms