RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 AEBP2Q6ZN18 517 aaPredicted RBP23.95■■□□□ 1.42
SUB1-208ENST00000511175 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
SUB1-208ENST00000511175 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
SUB1-208ENST00000511175 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
SUB1-208ENST00000511175 FOXD1Q16676 465 aa19.04■□□□□ 0.64
SUB1-208ENST00000511175 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
SUB1-208ENST00000511175 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
SUB1-208ENST00000511175 MSH5O43196 834 aa17.76■□□□□ 0.43
SUB1-208ENST00000511175 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
SUB1-208ENST00000511175 ADRA2BP18089 450 aa17.7■□□□□ 0.42
SUB1-208ENST00000511175 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
SUB1-208ENST00000511175 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
SUB1-208ENST00000511175 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
SUB1-208ENST00000511175 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
SUB1-208ENST00000511175 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
SUB1-208ENST00000511175 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
SUB1-208ENST00000511175 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
SUB1-208ENST00000511175 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
SUB1-208ENST00000511175 RNF216Q9NWF9 866 aaPredicted RBP15.35■□□□□ 0.05
SUB1-208ENST00000511175 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
SUB1-208ENST00000511175 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
SUB1-208ENST00000511175 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
SUB1-208ENST00000511175 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
SUB1-208ENST00000511175 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
SUB1-208ENST00000511175 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
SUB1-208ENST00000511175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
SUB1-208ENST00000511175 KCNA4P22459 653 aa14.6□□□□□ -0.07
SUB1-208ENST00000511175 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
SUB1-208ENST00000511175 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
SUB1-208ENST00000511175 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
SUB1-208ENST00000511175 CAPN15O75808 1086 aa14.26□□□□□ -0.13
SUB1-208ENST00000511175 DSG3P32926 999 aa14.21□□□□□ -0.13
SUB1-208ENST00000511175 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
SUB1-208ENST00000511175 ABCB7O75027 752 aa13.97□□□□□ -0.17
SUB1-208ENST00000511175 APLP2Q06481 763 aa13.94□□□□□ -0.18
SUB1-208ENST00000511175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
SUB1-208ENST00000511175 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
SUB1-208ENST00000511175 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
SUB1-208ENST00000511175 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
SUB1-208ENST00000511175 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
SUB1-208ENST00000511175 POTEHQ6S545 545 aa13.73□□□□□ -0.21
SUB1-208ENST00000511175 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
SUB1-208ENST00000511175 POLA2Q14181 598 aa13.63□□□□□ -0.23
SUB1-208ENST00000511175 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
SUB1-208ENST00000511175 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
SUB1-208ENST00000511175 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
SUB1-208ENST00000511175 ZBTB22O15209 634 aa13.45□□□□□ -0.26
SUB1-208ENST00000511175 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
SUB1-208ENST00000511175 ZBTB12Q9Y330 459 aaPredicted RBP13.24□□□□□ -0.29
SUB1-208ENST00000511175 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
SUB1-208ENST00000511175 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
SUB1-208ENST00000511175 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
SUB1-208ENST00000511175 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
SUB1-208ENST00000511175 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
SUB1-208ENST00000511175 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
SUB1-208ENST00000511175 FBLN2P98095 1184 aa12.92□□□□□ -0.34
SUB1-208ENST00000511175 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
SUB1-208ENST00000511175 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
SUB1-208ENST00000511175 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
SUB1-208ENST00000511175 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
SUB1-208ENST00000511175 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
SUB1-208ENST00000511175 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
SUB1-208ENST00000511175 HAX1O00165 279 aa12.75□□□□□ -0.37
SUB1-208ENST00000511175 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
SUB1-208ENST00000511175 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
SUB1-208ENST00000511175 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
SUB1-208ENST00000511175 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
SUB1-208ENST00000511175 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
SUB1-208ENST00000511175 EVX2Q03828 476 aa12.66□□□□□ -0.38
SUB1-208ENST00000511175 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
SUB1-208ENST00000511175 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
SUB1-208ENST00000511175 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
SUB1-208ENST00000511175 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
SUB1-208ENST00000511175 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
SUB1-208ENST00000511175 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
SUB1-208ENST00000511175 GABBR2O75899 941 aa12.31□□□□□ -0.44
SUB1-208ENST00000511175 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
SUB1-208ENST00000511175 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
SUB1-208ENST00000511175 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
SUB1-208ENST00000511175 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
SUB1-208ENST00000511175 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
SUB1-208ENST00000511175 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
SUB1-208ENST00000511175 LHX8Q68G74 356 aa12.04□□□□□ -0.48
SUB1-208ENST00000511175 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
SUB1-208ENST00000511175 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
SUB1-208ENST00000511175 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
SUB1-208ENST00000511175 CLCN6P51797 869 aa11.95□□□□□ -0.5
SUB1-208ENST00000511175 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
SUB1-208ENST00000511175 DCBLD2Q96PD2 775 aa11.92□□□□□ -0.5
SUB1-208ENST00000511175 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
SUB1-208ENST00000511175 PROM2Q8N271 834 aa11.89□□□□□ -0.51
SUB1-208ENST00000511175 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
SUB1-208ENST00000511175 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
SUB1-208ENST00000511175 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
SUB1-208ENST00000511175 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
SUB1-208ENST00000511175 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
SUB1-208ENST00000511175 POTEB2H3BUK9 544 aa11.7□□□□□ -0.54
SUB1-208ENST00000511175 MIER1Q8N108 512 aa11.66□□□□□ -0.54
SUB1-208ENST00000511175 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
SUB1-208ENST00000511175 OTUD5Q96G74 571 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms