RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
SSBP1-206ENST00000467681 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
SSBP1-206ENST00000467681 ABCC9O60706 1549 aa28.31■■■□□ 2.12
SSBP1-206ENST00000467681 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
SSBP1-206ENST00000467681 NACADO15069 1562 aa27.25■■□□□ 1.95
SSBP1-206ENST00000467681 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
SSBP1-206ENST00000467681 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
SSBP1-206ENST00000467681 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
SSBP1-206ENST00000467681 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
SSBP1-206ENST00000467681 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
SSBP1-206ENST00000467681 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
SSBP1-206ENST00000467681 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
SSBP1-206ENST00000467681 BICRAQ9NZM4 1560 aa26.4■■□□□ 1.82
SSBP1-206ENST00000467681 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
SSBP1-206ENST00000467681 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
SSBP1-206ENST00000467681 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
SSBP1-206ENST00000467681 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
SSBP1-206ENST00000467681 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
SSBP1-206ENST00000467681 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
SSBP1-206ENST00000467681 SMARCA4P51532 1647 aa25.28■■□□□ 1.64
SSBP1-206ENST00000467681 NCAPD3P42695 1498 aa25.22■■□□□ 1.63
SSBP1-206ENST00000467681 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
SSBP1-206ENST00000467681 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
SSBP1-206ENST00000467681 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
SSBP1-206ENST00000467681 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
SSBP1-206ENST00000467681 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
SSBP1-206ENST00000467681 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
SSBP1-206ENST00000467681 BAZ1BQ9UIG0 1483 aaKnown RBP24.97■■□□□ 1.59
SSBP1-206ENST00000467681 WIZO95785 1651 aa24.88■■□□□ 1.57
SSBP1-206ENST00000467681 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
SSBP1-206ENST00000467681 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
SSBP1-206ENST00000467681 NESP48681 1621 aa24.53■■□□□ 1.52
SSBP1-206ENST00000467681 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
SSBP1-206ENST00000467681 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
SSBP1-206ENST00000467681 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
SSBP1-206ENST00000467681 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
SSBP1-206ENST00000467681 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SSBP1-206ENST00000467681 CFTRP13569 1480 aa24.34■■□□□ 1.49
SSBP1-206ENST00000467681 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
SSBP1-206ENST00000467681 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
SSBP1-206ENST00000467681 CUX2O14529 1486 aa24.08■■□□□ 1.45
SSBP1-206ENST00000467681 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
SSBP1-206ENST00000467681 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
SSBP1-206ENST00000467681 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
SSBP1-206ENST00000467681 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
SSBP1-206ENST00000467681 WDR62O43379 1518 aa23.92■■□□□ 1.42
SSBP1-206ENST00000467681 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
SSBP1-206ENST00000467681 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
SSBP1-206ENST00000467681 TOPBP1Q92547 1522 aa23.78■■□□□ 1.4
SSBP1-206ENST00000467681 DNMBPQ6XZF7 1577 aa23.7■■□□□ 1.38
SSBP1-206ENST00000467681 CUX1P39880 1505 aa23.63■■□□□ 1.37
SSBP1-206ENST00000467681 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
SSBP1-206ENST00000467681 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
SSBP1-206ENST00000467681 SOGA1O94964 1423 aa23.57■■□□□ 1.36
SSBP1-206ENST00000467681 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.361e-7■□□□□ 10.2
SSBP1-206ENST00000467681 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
SSBP1-206ENST00000467681 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
SSBP1-206ENST00000467681 ZNF608Q9ULD9 1512 aaPredicted RBP23.5■■□□□ 1.35
SSBP1-206ENST00000467681 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
SSBP1-206ENST00000467681 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
SSBP1-206ENST00000467681 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.344e-9■□□□□ 8.1
SSBP1-206ENST00000467681 TOP2BQ02880 1626 aa23.41■■□□□ 1.34
SSBP1-206ENST00000467681 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
SSBP1-206ENST00000467681 DNAJC5Q9H3Z4 198 aa23.39■■□□□ 1.33
SSBP1-206ENST00000467681 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
SSBP1-206ENST00000467681 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
SSBP1-206ENST00000467681 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
SSBP1-206ENST00000467681 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
SSBP1-206ENST00000467681 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
SSBP1-206ENST00000467681 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
SSBP1-206ENST00000467681 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
SSBP1-206ENST00000467681 FBLN2P98095 1184 aa23.18■■□□□ 1.3
SSBP1-206ENST00000467681 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
SSBP1-206ENST00000467681 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
SSBP1-206ENST00000467681 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
SSBP1-206ENST00000467681 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
SSBP1-206ENST00000467681 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
SSBP1-206ENST00000467681 KIF27Q86VH2 1401 aa23.08■■□□□ 1.28
SSBP1-206ENST00000467681 IGF1RP08069 1367 aa23.05■■□□□ 1.28
SSBP1-206ENST00000467681 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
SSBP1-206ENST00000467681 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
SSBP1-206ENST00000467681 PBRM1Q86U86 1689 aa23■■□□□ 1.27
SSBP1-206ENST00000467681 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
SSBP1-206ENST00000467681 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
SSBP1-206ENST00000467681 CHD1O14646 1710 aa22.95■■□□□ 1.26
SSBP1-206ENST00000467681 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
SSBP1-206ENST00000467681 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
SSBP1-206ENST00000467681 GRIN2AQ12879 1464 aa22.89■■□□□ 1.25
SSBP1-206ENST00000467681 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
SSBP1-206ENST00000467681 NUP160Q12769 1436 aa22.82■■□□□ 1.24
SSBP1-206ENST00000467681 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
SSBP1-206ENST00000467681 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
SSBP1-206ENST00000467681 CUL7Q14999 1698 aa22.75■■□□□ 1.23
SSBP1-206ENST00000467681 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
SSBP1-206ENST00000467681 JPH4Q96JJ6 628 aa22.72■■□□□ 1.23
SSBP1-206ENST00000467681 ARHGEF11O15085 1522 aa22.71■■□□□ 1.23
SSBP1-206ENST00000467681 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
SSBP1-206ENST00000467681 EEA1Q15075 1411 aa22.69■■□□□ 1.22
SSBP1-206ENST00000467681 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
SSBP1-206ENST00000467681 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms