RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 NISCHQ9Y2I1 1504 aa22.54■■□□□ 1.2
ERBB2-218ENST00000584450 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
ERBB2-218ENST00000584450 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
ERBB2-218ENST00000584450 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
ERBB2-218ENST00000584450 EHMT2Q96KQ7 1210 aa19.85■□□□□ 0.77
ERBB2-218ENST00000584450 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
ERBB2-218ENST00000584450 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
ERBB2-218ENST00000584450 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
ERBB2-218ENST00000584450 LOC105371045A0A1W2PR82 267 aa19.2■□□□□ 0.66
ERBB2-218ENST00000584450 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
ERBB2-218ENST00000584450 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
ERBB2-218ENST00000584450 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
ERBB2-218ENST00000584450 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
ERBB2-218ENST00000584450 RANGAP1P46060 587 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-218ENST00000584450 ABCC9O60706 1549 aa18.78■□□□□ 0.6
ERBB2-218ENST00000584450 HRCP23327 699 aa18.75■□□□□ 0.59
ERBB2-218ENST00000584450 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
ERBB2-218ENST00000584450 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
ERBB2-218ENST00000584450 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.553e-12■□□□□ 11
ERBB2-218ENST00000584450 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
ERBB2-218ENST00000584450 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
ERBB2-218ENST00000584450 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
ERBB2-218ENST00000584450 APLP2Q06481 763 aa18.44■□□□□ 0.54
ERBB2-218ENST00000584450 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
ERBB2-218ENST00000584450 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
ERBB2-218ENST00000584450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-218ENST00000584450 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
ERBB2-218ENST00000584450 HNRNPUL2Q1KMD3 747 aaKnown RBP18.14■□□□□ 0.49
ERBB2-218ENST00000584450 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
ERBB2-218ENST00000584450 YTHDC1Q96MU7 727 aaKnown RBP18.05■□□□□ 0.48
ERBB2-218ENST00000584450 ITGAEP38570 1179 aa18.01■□□□□ 0.47
ERBB2-218ENST00000584450 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
ERBB2-218ENST00000584450 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
ERBB2-218ENST00000584450 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
ERBB2-218ENST00000584450 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
ERBB2-218ENST00000584450 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
ERBB2-218ENST00000584450 RB1CC1Q8TDY2 1594 aa17.73■□□□□ 0.43
ERBB2-218ENST00000584450 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
ERBB2-218ENST00000584450 NACADO15069 1562 aa17.61■□□□□ 0.41
ERBB2-218ENST00000584450 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
ERBB2-218ENST00000584450 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
ERBB2-218ENST00000584450 SOGA1O94964 1423 aa17.48■□□□□ 0.39
ERBB2-218ENST00000584450 WIZO95785 1651 aa17.47■□□□□ 0.39
ERBB2-218ENST00000584450 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
ERBB2-218ENST00000584450 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
ERBB2-218ENST00000584450 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
ERBB2-218ENST00000584450 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
ERBB2-218ENST00000584450 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
ERBB2-218ENST00000584450 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-218ENST00000584450 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
ERBB2-218ENST00000584450 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
ERBB2-218ENST00000584450 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
ERBB2-218ENST00000584450 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
ERBB2-218ENST00000584450 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
ERBB2-218ENST00000584450 CLIP1P30622 1438 aa17.32■□□□□ 0.36
ERBB2-218ENST00000584450 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
ERBB2-218ENST00000584450 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
ERBB2-218ENST00000584450 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
ERBB2-218ENST00000584450 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
ERBB2-218ENST00000584450 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
ERBB2-218ENST00000584450 POLR3GLQ9BT43 218 aa17.24■□□□□ 0.35
ERBB2-218ENST00000584450 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
ERBB2-218ENST00000584450 MIER1Q8N108 512 aa17.2■□□□□ 0.34
ERBB2-218ENST00000584450 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
ERBB2-218ENST00000584450 EEA1Q15075 1411 aa17.14■□□□□ 0.33
ERBB2-218ENST00000584450 FBLN2P98095 1184 aa17.13■□□□□ 0.33
ERBB2-218ENST00000584450 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-218ENST00000584450 BCANQ96GW7 911 aa17.12■□□□□ 0.33
ERBB2-218ENST00000584450 NEFLP07196 543 aa17.11■□□□□ 0.33
ERBB2-218ENST00000584450 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
ERBB2-218ENST00000584450 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
ERBB2-218ENST00000584450 KANK4Q5T7N3 995 aaPredicted RBP17.07■□□□□ 0.32
ERBB2-218ENST00000584450 DDX10Q13206 875 aaKnown RBP17.03■□□□□ 0.32
ERBB2-218ENST00000584450 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
ERBB2-218ENST00000584450 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
ERBB2-218ENST00000584450 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
ERBB2-218ENST00000584450 KIF27Q86VH2 1401 aa16.96■□□□□ 0.31
ERBB2-218ENST00000584450 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
ERBB2-218ENST00000584450 ATAD2BQ9ULI0 1458 aa16.94■□□□□ 0.3
ERBB2-218ENST00000584450 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
ERBB2-218ENST00000584450 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
ERBB2-218ENST00000584450 ZNF777Q9ULD5 760 aaPredicted RBP16.92■□□□□ 0.3
ERBB2-218ENST00000584450 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
ERBB2-218ENST00000584450 ANP32CO43423 234 aa16.89■□□□□ 0.29
ERBB2-218ENST00000584450 MYT1LQ9UL68 1186 aa16.88■□□□□ 0.29
ERBB2-218ENST00000584450 CUX2O14529 1486 aa16.86■□□□□ 0.29
ERBB2-218ENST00000584450 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
ERBB2-218ENST00000584450 MTUS2Q5JR59 1369 aa16.83■□□□□ 0.28
ERBB2-218ENST00000584450 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
ERBB2-218ENST00000584450 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
ERBB2-218ENST00000584450 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
ERBB2-218ENST00000584450 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
ERBB2-218ENST00000584450 FKBP8Q14318 412 aa16.74■□□□□ 0.27
ERBB2-218ENST00000584450 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
ERBB2-218ENST00000584450 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
ERBB2-218ENST00000584450 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
ERBB2-218ENST00000584450 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
ERBB2-218ENST00000584450 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
ERBB2-218ENST00000584450 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
ERBB2-218ENST00000584450 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms