Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 FBRSL1-207ENST00000543360 238 ntTSL 221.95■■□□□ 1.11e-7■□□□□ 8.7
NCBP2P52298 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.092e-9■□□□□ 8.7
NCBP2P52298 VDAC1-204ENST00000425992 703 ntTSL 321.75■■□□□ 1.075e-6■□□□□ 8.7
NCBP2P52298 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.062e-9■□□□□ 8.7
NCBP2P52298 SRRM1-222ENST00000596378 2314 ntTSL 1 (best)21.48■■□□□ 1.035e-6■□□□□ 8.7
NCBP2P52298 RAPH1-212ENST00000465669 360 ntTSL 221.31■■□□□ 11e-7■□□□□ 8.7
NCBP2P52298 RAPH1-206ENST00000420371 492 ntTSL 321.25■□□□□ 0.991e-7■□□□□ 8.7
NCBP2P52298 CAPN10-212ENST00000463653 787 ntTSL 221.22■□□□□ 0.992e-9■□□□□ 8.7
NCBP2P52298 CAPN10-206ENST00000391983 2320 ntTSL 1 (best)20.82■□□□□ 0.922e-9■□□□□ 8.7
NCBP2P52298 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.872e-6■□□□□ 8.7
NCBP2P52298 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.35■□□□□ 0.851e-7■□□□□ 8.7
NCBP2P52298 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.821e-7■□□□□ 8.7
NCBP2P52298 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.815e-6■□□□□ 8.7
NCBP2P52298 CAPN10-201ENST00000270361 2453 ntTSL 1 (best)19.94■□□□□ 0.782e-9■□□□□ 8.7
NCBP2P52298 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.781e-7■□□□□ 8.7
NCBP2P52298 DCTD-214ENST00000512766 683 ntTSL 519.24■□□□□ 0.671e-7■□□□□ 8.7
NCBP2P52298 CAPN10-209ENST00000416591 2514 ntTSL 1 (best)19.19■□□□□ 0.662e-9■□□□□ 8.7
NCBP2P52298 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.54■□□□□ 0.565e-6■□□□□ 8.7
NCBP2P52298 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.47■□□□□ 0.552e-6■□□□□ 8.7
NCBP2P52298 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.41■□□□□ 0.545e-6■□□□□ 8.7
NCBP2P52298 USP33-212ENST00000524778 389 ntTSL 518.34■□□□□ 0.535e-6■□□□□ 8.7
NCBP2P52298 CAPN10-205ENST00000357048 2202 ntTSL 1 (best)18.17■□□□□ 0.52e-9■□□□□ 8.7
NCBP2P52298 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.91■□□□□ 0.462e-9■□□□□ 8.7
NCBP2P52298 RFC2-203ENST00000463194 853 ntTSL 317.86■□□□□ 0.455e-6■□□□□ 8.7
NCBP2P52298 RFC2-207ENST00000480432 871 ntTSL 317.86■□□□□ 0.455e-6■□□□□ 8.7
NCBP2P52298 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.86■□□□□ 0.455e-6■□□□□ 8.7
NCBP2P52298 RFC2-210ENST00000493156 782 ntTSL 517.84■□□□□ 0.455e-6■□□□□ 8.7
NCBP2P52298 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.82■□□□□ 0.442e-6■□□□□ 8.7
NCBP2P52298 SIPA1L3-208ENST00000599644 545 ntTSL 417.71■□□□□ 0.431e-7■□□□□ 8.7
NCBP2P52298 FDFT1-207ENST00000525607 1773 ntTSL 217.63■□□□□ 0.412e-6■□□□□ 8.7
NCBP2P52298 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.415e-6■□□□□ 8.7
NCBP2P52298 TF-202ENST00000414694 546 ntTSL 417.48■□□□□ 0.396e-8■□□□□ 8.7
NCBP2P52298 TF-203ENST00000460531 577 ntTSL 417.48■□□□□ 0.396e-8■□□□□ 8.7
NCBP2P52298 TF-210ENST00000482271 659 ntTSL 417.48■□□□□ 0.396e-8■□□□□ 8.7
NCBP2P52298 TF-211ENST00000485977 580 ntTSL 317.48■□□□□ 0.396e-8■□□□□ 8.7
NCBP2P52298 TF-212ENST00000493011 999 ntTSL 217.48■□□□□ 0.396e-8■□□□□ 8.7
NCBP2P52298 TF-213ENST00000494430 594 ntTSL 417.48■□□□□ 0.396e-8■□□□□ 8.7
NCBP2P52298 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.391e-7■□□□□ 8.7
NCBP2P52298 DPP9-221ENST00000601130 600 ntTSL 417.32■□□□□ 0.366e-8■□□□□ 8.7
NCBP2P52298 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.361e-7■□□□□ 8.7
NCBP2P52298 SSFA2-212ENST00000480753 2526 ntTSL 217.19■□□□□ 0.345e-6■□□□□ 8.7
NCBP2P52298 DPP9-224ENST00000601764 1909 ntTSL 517.15■□□□□ 0.346e-8■□□□□ 8.7
NCBP2P52298 DPP9-225ENST00000602161 566 ntTSL 417.07■□□□□ 0.326e-8■□□□□ 8.7
NCBP2P52298 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.315e-6■□□□□ 8.7
NCBP2P52298 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.94■□□□□ 0.32e-9■□□□□ 8.7
NCBP2P52298 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.67■□□□□ 0.265e-6■□□□□ 8.7
NCBP2P52298 FDFT1-206ENST00000525571 810 ntTSL 316.63■□□□□ 0.255e-6■□□□□ 8.7
NCBP2P52298 DCTD-210ENST00000509218 568 ntTSL 516.57■□□□□ 0.241e-7■□□□□ 8.7
NCBP2P52298 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.241e-7■□□□□ 8.7
NCBP2P52298 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.245e-6■□□□□ 8.7
NCBP2P52298 DPP9-209ENST00000597726 570 ntTSL 416.48■□□□□ 0.236e-8■□□□□ 8.7
NCBP2P52298 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.36■□□□□ 0.215e-6■□□□□ 8.7
NCBP2P52298 USP33-213ENST00000525113 497 ntTSL 316.35■□□□□ 0.215e-6■□□□□ 8.7
NCBP2P52298 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.195e-6■□□□□ 8.7
NCBP2P52298 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.195e-6■□□□□ 8.7
NCBP2P52298 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.185e-6■□□□□ 8.7
NCBP2P52298 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.185e-6■□□□□ 8.7
NCBP2P52298 TF-208ENST00000474287 645 ntTSL 216.14■□□□□ 0.176e-8■□□□□ 8.7
NCBP2P52298 VAC14-210ENST00000568548 2945 ntTSL 1 (best)16.13■□□□□ 0.175e-6■□□□□ 8.7
NCBP2P52298 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.175e-6■□□□□ 8.7
NCBP2P52298 FDFT1-217ENST00000530337 741 ntTSL 315.88■□□□□ 0.135e-6■□□□□ 8.7
NCBP2P52298 DCTD-203ENST00000500813 1829 ntTSL 215.61■□□□□ 0.091e-7■□□□□ 8.7
NCBP2P52298 TAF1C-213ENST00000565279 912 ntTSL 515.59■□□□□ 0.091e-7■□□□□ 8.7
NCBP2P52298 TAF1C-205ENST00000561955 570 ntAPPRIS ALT2 TSL 415.52■□□□□ 0.081e-7■□□□□ 8.7
NCBP2P52298 TAF1C-208ENST00000563428 2531 ntTSL 215.48■□□□□ 0.071e-7■□□□□ 8.7
NCBP2P52298 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.055e-6■□□□□ 8.7
NCBP2P52298 EXOC6B-203ENST00000410112 1372 ntTSL 515.28■□□□□ 0.048e-15■□□□□ 8.7
NCBP2P52298 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.035e-6■□□□□ 8.7
NCBP2P52298 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.19■□□□□ 0.025e-6■□□□□ 8.7
NCBP2P52298 DPP9-206ENST00000597024 501 ntTSL 215.15■□□□□ 0.026e-8■□□□□ 8.7
NCBP2P52298 USP33-215ENST00000528150 500 ntTSL 315.14■□□□□ 0.015e-6■□□□□ 8.7
NCBP2P52298 TAF1C-204ENST00000544090 2747 ntTSL 215.09■□□□□ 0.011e-7■□□□□ 8.7
NCBP2P52298 DPP9-219ENST00000600556 742 ntTSL 314.96□□□□□ -0.016e-8■□□□□ 8.7
NCBP2P52298 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.92□□□□□ -0.025e-6■□□□□ 8.7
NCBP2P52298 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.035e-6■□□□□ 8.7
NCBP2P52298 ENO2-210ENST00000539713 543 ntTSL 414.86□□□□□ -0.035e-6■□□□□ 8.7
NCBP2P52298 TFR2-210ENST00000474947 1514 ntTSL 214.85□□□□□ -0.035e-6■□□□□ 8.7
NCBP2P52298 TAF1C-220ENST00000569505 564 ntTSL 314.83□□□□□ -0.041e-7■□□□□ 8.7
NCBP2P52298 TAF1C-210ENST00000564345 602 ntAPPRIS ALT2 TSL 414.8□□□□□ -0.041e-7■□□□□ 8.7
NCBP2P52298 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.68□□□□□ -0.068e-15■□□□□ 8.7
NCBP2P52298 TF-206ENST00000466911 526 ntTSL 414.67□□□□□ -0.066e-8■□□□□ 8.7
NCBP2P52298 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.56□□□□□ -0.086e-8■□□□□ 8.7
NCBP2P52298 DPP9-218ENST00000600497 626 ntTSL 314.35□□□□□ -0.116e-8■□□□□ 8.7
NCBP2P52298 ENO2-207ENST00000537688 547 ntTSL 514.25□□□□□ -0.135e-6■□□□□ 8.7
NCBP2P52298 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.141e-7■□□□□ 8.7
NCBP2P52298 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.12□□□□□ -0.158e-15■□□□□ 8.7
NCBP2P52298 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.152e-6■□□□□ 8.7
NCBP2P52298 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.155e-6■□□□□ 8.7
NCBP2P52298 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.01□□□□□ -0.172e-6■□□□□ 8.7
NCBP2P52298 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.181e-7■□□□□ 8.7
NCBP2P52298 DFFA-203ENST00000476658 744 ntTSL 313.9□□□□□ -0.185e-6■□□□□ 8.7
NCBP2P52298 STUB1-210ENST00000567790 428 ntTSL 313.9□□□□□ -0.185e-6■□□□□ 8.7
NCBP2P52298 MRPL20-204ENST00000487659 1693 ntTSL 213.88□□□□□ -0.195e-6■□□□□ 8.7
NCBP2P52298 TAF1C-221ENST00000569609 555 ntTSL 413.86□□□□□ -0.191e-7■□□□□ 8.7
NCBP2P52298 DPP9-205ENST00000595940 552 ntTSL 413.85□□□□□ -0.196e-8■□□□□ 8.7
NCBP2P52298 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.215e-6■□□□□ 8.7
NCBP2P52298 TAF1C-211ENST00000564454 555 ntAPPRIS ALT2 TSL 413.75□□□□□ -0.211e-7■□□□□ 8.7
NCBP2P52298 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.215e-6■□□□□ 8.7
NCBP2P52298 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.225e-6■□□□□ 8.7
NCBP2P52298 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.5□□□□□ -0.255e-6■□□□□ 8.7
Retrieved 100 of 18,329 protein–RNA pairs in 243.9 ms