RNA–Protein interactions for RNA: ENST00000352131.7

RFC2-202, Transcript of replication factor C subunit 2, humanhuman

TSL 1 (best) BASIC

Gene RFC2, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-202ENST00000352131 NISCHQ9Y2I1 1504 aa47.73■■■■■ 5.23
RFC2-202ENST00000352131 CCDC180Q9P1Z9 1646 aa42.27■■■■■ 4.36
RFC2-202ENST00000352131 ABCC9O60706 1549 aa41.06■■■■■ 4.16
RFC2-202ENST00000352131 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.97
RFC2-202ENST00000352131 NACADO15069 1562 aa39.68■■■■□ 3.94
RFC2-202ENST00000352131 DCAF8L2P0C7V8 631 aa39.67■■■■□ 3.94
RFC2-202ENST00000352131 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.93
RFC2-202ENST00000352131 MYO15BQ96JP2 1530 aa39.58■■■■□ 3.93
RFC2-202ENST00000352131 DCAF1Q9Y4B6 1507 aa39.52■■■■□ 3.92
RFC2-202ENST00000352131 UNC13AQ9UPW8 1703 aa38.75■■■■□ 3.79
RFC2-202ENST00000352131 SCRIBQ14160 1630 aa38.58■■■■□ 3.77
RFC2-202ENST00000352131 BICRAQ9NZM4 1560 aa38.47■■■■□ 3.75
RFC2-202ENST00000352131 PABPN1Q86U42 306 aaKnown RBP eCLIP38.43■■■■□ 3.74
RFC2-202ENST00000352131 SHROOM4Q9ULL8 1493 aa38.07■■■■□ 3.69
RFC2-202ENST00000352131 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
RFC2-202ENST00000352131 EIF4G1Q04637 1599 aaKnown RBP37.39■■■■□ 3.58
RFC2-202ENST00000352131 CC2D2AQ9P2K1 1620 aa37.17■■■■□ 3.54
RFC2-202ENST00000352131 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
RFC2-202ENST00000352131 SMARCA4P51532 1647 aa36.95■■■■□ 3.51
RFC2-202ENST00000352131 BAZ1AQ9NRL2 1556 aaPredicted RBP36.95■■■■□ 3.51
RFC2-202ENST00000352131 MROH2BQ7Z745 1585 aa36.79■■■■□ 3.48
RFC2-202ENST00000352131 ATAD2BQ9ULI0 1458 aa36.7■■■■□ 3.46
RFC2-202ENST00000352131 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
RFC2-202ENST00000352131 NCAPD3P42695 1498 aa36.63■■■■□ 3.45
RFC2-202ENST00000352131 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
RFC2-202ENST00000352131 RSF1Q96T23 1441 aaPredicted RBP36.49■■■■□ 3.43
RFC2-202ENST00000352131 HMGXB3Q12766 1538 aa36.47■■■■□ 3.43
RFC2-202ENST00000352131 WIZO95785 1651 aa36.39■■■■□ 3.42
RFC2-202ENST00000352131 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
RFC2-202ENST00000352131 TOP2AP11388 1531 aaKnown RBP36.03■■■■□ 3.36
RFC2-202ENST00000352131 SUPT5HO00267 1087 aaKnown RBP35.74■■■■□ 3.31
RFC2-202ENST00000352131 NESP48681 1621 aa35.64■■■■□ 3.3
RFC2-202ENST00000352131 CCDC88BA6NC98 1476 aa35.62■■■■□ 3.29
RFC2-202ENST00000352131 LAMC3Q9Y6N6 1575 aa35.58■■■■□ 3.29
RFC2-202ENST00000352131 CADPSQ9ULU8 1353 aa35.57■■■■□ 3.29
RFC2-202ENST00000352131 CFTRP13569 1480 aa35.44■■■■□ 3.26
RFC2-202ENST00000352131 PDS5BQ9NTI5 1447 aa35.34■■■■□ 3.25
RFC2-202ENST00000352131 ERCC6Q03468 1493 aa35.34■■■■□ 3.25
RFC2-202ENST00000352131 KIF21AQ7Z4S6 1674 aa35.2■■■■□ 3.23
RFC2-202ENST00000352131 PRDM2Q13029 1718 aa35.15■■■■□ 3.22
RFC2-202ENST00000352131 FANCD2Q9BXW9 1451 aa35.15■■■■□ 3.22
RFC2-202ENST00000352131 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
RFC2-202ENST00000352131 THOC2Q8NI27 1593 aaKnown RBP35.03■■■■□ 3.2
RFC2-202ENST00000352131 MRC2Q9UBG0 1479 aa34.96■■■■□ 3.19
RFC2-202ENST00000352131 CUX2O14529 1486 aa34.9■■■■□ 3.18
RFC2-202ENST00000352131 WDR62O43379 1518 aa34.85■■■■□ 3.17
RFC2-202ENST00000352131 URB2Q14146 1524 aaKnown RBP34.8■■■■□ 3.16
RFC2-202ENST00000352131 ABCC8Q09428 1581 aa34.63■■■■□ 3.13
RFC2-202ENST00000352131 TOPBP1Q92547 1522 aa34.63■■■■□ 3.13
RFC2-202ENST00000352131 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
RFC2-202ENST00000352131 CUX1P39880 1505 aa34.5■■■■□ 3.11
RFC2-202ENST00000352131 WRNQ14191 1432 aaPredicted RBP eCLIP34.37■■■■□ 3.09
RFC2-202ENST00000352131 POLA1P09884 1462 aaPredicted RBP34.36■■■■□ 3.09
RFC2-202ENST00000352131 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
RFC2-202ENST00000352131 FGD5Q6ZNL6 1462 aa34.31■■■■□ 3.08
RFC2-202ENST00000352131 SYNJ1O43426 1573 aa34.27■■■■□ 3.08
RFC2-202ENST00000352131 TOP2BQ02880 1626 aa34.27■■■■□ 3.08
RFC2-202ENST00000352131 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.08
RFC2-202ENST00000352131 TARBP1Q13395 1621 aaKnown RBP34.24■■■■□ 3.07
RFC2-202ENST00000352131 SOGA1O94964 1423 aa34.22■■■■□ 3.07
RFC2-202ENST00000352131 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.07
RFC2-202ENST00000352131 ZNF608Q9ULD9 1512 aaPredicted RBP34.15■■■■□ 3.06
RFC2-202ENST00000352131 WDR97A6NE52 1622 aa34.02■■■■□ 3.04
RFC2-202ENST00000352131 EIF4G3O43432 1585 aaKnown RBP34.01■■■■□ 3.04
RFC2-202ENST00000352131 ABCA10Q8WWZ4 1543 aa34.01■■■■□ 3.03
RFC2-202ENST00000352131 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.031e-6■■■□□ 18.3
RFC2-202ENST00000352131 TDRD9Q8NDG6 1382 aaKnown RBP33.99■■■■□ 3.03
RFC2-202ENST00000352131 ABCA5Q8WWZ7 1642 aa33.84■■■■□ 3.01
RFC2-202ENST00000352131 GAPVD1Q14C86 1478 aa33.83■■■■□ 3.01
RFC2-202ENST00000352131 GRIN2BQ13224 1484 aa33.78■■■■□ 3
RFC2-202ENST00000352131 TRIM41Q8WV44 630 aa33.74■■■□□ 2.99
RFC2-202ENST00000352131 PBRM1Q86U86 1689 aa33.71■■■□□ 2.99
RFC2-202ENST00000352131 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
RFC2-202ENST00000352131 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
RFC2-202ENST00000352131 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
RFC2-202ENST00000352131 ERICH3Q5RHP9 1530 aa33.6■■■□□ 2.97
RFC2-202ENST00000352131 CHIC1Q5VXU3 224 aa33.58■■■□□ 2.97
RFC2-202ENST00000352131 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
RFC2-202ENST00000352131 CHD1O14646 1710 aa33.52■■■□□ 2.96
RFC2-202ENST00000352131 OSCARQ8IYS5 282 aa33.5■■■□□ 2.95
RFC2-202ENST00000352131 FBLN2P98095 1184 aa33.49■■■□□ 2.95
RFC2-202ENST00000352131 ADAMTS12P58397 1594 aa33.49■■■□□ 2.95
RFC2-202ENST00000352131 IGF1RP08069 1367 aa33.49■■■□□ 2.95
RFC2-202ENST00000352131 DNAJC5Q9H3Z4 198 aa33.48■■■□□ 2.95
RFC2-202ENST00000352131 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
RFC2-202ENST00000352131 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.95
RFC2-202ENST00000352131 RUSC2Q8N2Y8 1516 aa33.44■■■□□ 2.94
RFC2-202ENST00000352131 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
RFC2-202ENST00000352131 CUL7Q14999 1698 aa33.33■■■□□ 2.93
RFC2-202ENST00000352131 CARMIL1Q5VZK9 1371 aa33.27■■■□□ 2.92
RFC2-202ENST00000352131 NUP160Q12769 1436 aa33.21■■■□□ 2.91
RFC2-202ENST00000352131 CLASP1Q7Z460 1538 aa33.2■■■□□ 2.9
RFC2-202ENST00000352131 EEA1Q15075 1411 aa33.19■■■□□ 2.9
RFC2-202ENST00000352131 CEP170Q5SW79 1584 aa33.17■■■□□ 2.9
RFC2-202ENST00000352131 CSRNP3Q8WYN3 585 aa33.11■■■□□ 2.89
RFC2-202ENST00000352131 RAPGEF2Q9Y4G8 1499 aa33.1■■■□□ 2.89
RFC2-202ENST00000352131 PRXQ9BXM0 1461 aa33.08■■■□□ 2.89
RFC2-202ENST00000352131 FAM9AQ8IZU1 332 aaPredicted RBP33.02■■■□□ 2.88
RFC2-202ENST00000352131 ARHGEF11O15085 1522 aa32.96■■■□□ 2.87
RFC2-202ENST00000352131 KIAA0586Q9BVV6 1533 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms