RNA–Protein interactions for RNA: ENST00000487659.1

MRPL20-204, Transcript of mitochondrial ribosomal protein L20, humanhuman

TSL 2

Gene MRPL20, Length 1,693 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL20-204ENST00000487659 NISCHQ9Y2I1 1504 aa36.82■■■■□ 3.48
MRPL20-204ENST00000487659 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
MRPL20-204ENST00000487659 ABCC9O60706 1549 aa32.25■■■□□ 2.75
MRPL20-204ENST00000487659 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
MRPL20-204ENST00000487659 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
MRPL20-204ENST00000487659 NACADO15069 1562 aa30.83■■■□□ 2.53
MRPL20-204ENST00000487659 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
MRPL20-204ENST00000487659 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
MRPL20-204ENST00000487659 UNC13AQ9UPW8 1703 aa30.4■■■□□ 2.46
MRPL20-204ENST00000487659 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
MRPL20-204ENST00000487659 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
MRPL20-204ENST00000487659 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
MRPL20-204ENST00000487659 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
MRPL20-204ENST00000487659 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.34
MRPL20-204ENST00000487659 SHROOM4Q9ULL8 1493 aa29.58■■■□□ 2.33
MRPL20-204ENST00000487659 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
MRPL20-204ENST00000487659 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
MRPL20-204ENST00000487659 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.23
MRPL20-204ENST00000487659 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
MRPL20-204ENST00000487659 BAZ1AQ9NRL2 1556 aaPredicted RBP28.55■■■□□ 2.16
MRPL20-204ENST00000487659 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.15
MRPL20-204ENST00000487659 SMARCA2P51531 1590 aa28.43■■■□□ 2.14
MRPL20-204ENST00000487659 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
MRPL20-204ENST00000487659 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
MRPL20-204ENST00000487659 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
MRPL20-204ENST00000487659 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
MRPL20-204ENST00000487659 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
MRPL20-204ENST00000487659 WIZO95785 1651 aa28.17■■■□□ 2.1
MRPL20-204ENST00000487659 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
MRPL20-204ENST00000487659 NESP48681 1621 aa27.89■■■□□ 2.05
MRPL20-204ENST00000487659 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
MRPL20-204ENST00000487659 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
MRPL20-204ENST00000487659 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
MRPL20-204ENST00000487659 KIF21AQ7Z4S6 1674 aa27.63■■■□□ 2.01
MRPL20-204ENST00000487659 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
MRPL20-204ENST00000487659 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
MRPL20-204ENST00000487659 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
MRPL20-204ENST00000487659 CUX2O14529 1486 aa27.47■■□□□ 1.99
MRPL20-204ENST00000487659 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
MRPL20-204ENST00000487659 CFTRP13569 1480 aa27.41■■□□□ 1.98
MRPL20-204ENST00000487659 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
MRPL20-204ENST00000487659 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.96
MRPL20-204ENST00000487659 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
MRPL20-204ENST00000487659 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
MRPL20-204ENST00000487659 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
MRPL20-204ENST00000487659 WDR62O43379 1518 aa27.21■■□□□ 1.95
MRPL20-204ENST00000487659 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
MRPL20-204ENST00000487659 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
MRPL20-204ENST00000487659 DNMBPQ6XZF7 1577 aa26.86■■□□□ 1.89
MRPL20-204ENST00000487659 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
MRPL20-204ENST00000487659 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
MRPL20-204ENST00000487659 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
MRPL20-204ENST00000487659 CUX1P39880 1505 aa26.66■■□□□ 1.86
MRPL20-204ENST00000487659 ZNF608Q9ULD9 1512 aaPredicted RBP26.66■■□□□ 1.86
MRPL20-204ENST00000487659 POLA1P09884 1462 aaPredicted RBP26.65■■□□□ 1.86
MRPL20-204ENST00000487659 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
MRPL20-204ENST00000487659 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
MRPL20-204ENST00000487659 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
MRPL20-204ENST00000487659 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
MRPL20-204ENST00000487659 SOGA1O94964 1423 aa26.51■■□□□ 1.83
MRPL20-204ENST00000487659 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.831e-7■■■■■ 29.6
MRPL20-204ENST00000487659 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
MRPL20-204ENST00000487659 WDR97A6NE52 1622 aa26.43■■□□□ 1.82
MRPL20-204ENST00000487659 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
MRPL20-204ENST00000487659 WRNQ14191 1432 aaPredicted RBP eCLIP26.41■■□□□ 1.82
MRPL20-204ENST00000487659 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
MRPL20-204ENST00000487659 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
MRPL20-204ENST00000487659 CHD1O14646 1710 aa26.35■■□□□ 1.81
MRPL20-204ENST00000487659 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
MRPL20-204ENST00000487659 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
MRPL20-204ENST00000487659 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
MRPL20-204ENST00000487659 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
MRPL20-204ENST00000487659 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
MRPL20-204ENST00000487659 GAPVD1Q14C86 1478 aa26.22■■□□□ 1.79
MRPL20-204ENST00000487659 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
MRPL20-204ENST00000487659 FBLN2P98095 1184 aa26.2■■□□□ 1.78
MRPL20-204ENST00000487659 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
MRPL20-204ENST00000487659 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
MRPL20-204ENST00000487659 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
MRPL20-204ENST00000487659 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
MRPL20-204ENST00000487659 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
MRPL20-204ENST00000487659 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
MRPL20-204ENST00000487659 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
MRPL20-204ENST00000487659 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
MRPL20-204ENST00000487659 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
MRPL20-204ENST00000487659 CLASP1Q7Z460 1538 aa25.94■■□□□ 1.74
MRPL20-204ENST00000487659 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
MRPL20-204ENST00000487659 GRIN2AQ12879 1464 aa25.9■■□□□ 1.74
MRPL20-204ENST00000487659 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
MRPL20-204ENST00000487659 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
MRPL20-204ENST00000487659 CEP170Q5SW79 1584 aa25.83■■□□□ 1.72
MRPL20-204ENST00000487659 CUL7Q14999 1698 aa25.77■■□□□ 1.72
MRPL20-204ENST00000487659 NUP160Q12769 1436 aa25.75■■□□□ 1.71
MRPL20-204ENST00000487659 IGF1RP08069 1367 aa25.73■■□□□ 1.71
MRPL20-204ENST00000487659 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
MRPL20-204ENST00000487659 CYB5RLQ6IPT4 315 aa25.69■■□□□ 1.7
MRPL20-204ENST00000487659 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
MRPL20-204ENST00000487659 SHROOM2Q13796 1616 aa25.64■■□□□ 1.7
MRPL20-204ENST00000487659 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
MRPL20-204ENST00000487659 CARMIL1Q5VZK9 1371 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms