RNA–Protein interactions for RNA: ENST00000223051.7

TFR2-201, Transcript of transferrin receptor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFR2, Length 2,888 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFR2-201ENST00000223051 NISCHQ9Y2I1 1504 aa29.47■■■□□ 2.31
TFR2-201ENST00000223051 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
TFR2-201ENST00000223051 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
TFR2-201ENST00000223051 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
TFR2-201ENST00000223051 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
TFR2-201ENST00000223051 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
TFR2-201ENST00000223051 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.5
TFR2-201ENST00000223051 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
TFR2-201ENST00000223051 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
TFR2-201ENST00000223051 HRCP23327 699 aa23.95■■□□□ 1.42
TFR2-201ENST00000223051 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
TFR2-201ENST00000223051 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
TFR2-201ENST00000223051 ABCC9O60706 1549 aa23.55■■□□□ 1.36
TFR2-201ENST00000223051 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
TFR2-201ENST00000223051 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
TFR2-201ENST00000223051 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
TFR2-201ENST00000223051 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
TFR2-201ENST00000223051 TRIM26Q12899 539 aaPredicted RBP23.37■■□□□ 1.33
TFR2-201ENST00000223051 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
TFR2-201ENST00000223051 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
TFR2-201ENST00000223051 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
TFR2-201ENST00000223051 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
TFR2-201ENST00000223051 NACADO15069 1562 aa23.03■■□□□ 1.28
TFR2-201ENST00000223051 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
TFR2-201ENST00000223051 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
TFR2-201ENST00000223051 WIZO95785 1651 aa22.82■■□□□ 1.24
TFR2-201ENST00000223051 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
TFR2-201ENST00000223051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
TFR2-201ENST00000223051 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
TFR2-201ENST00000223051 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
TFR2-201ENST00000223051 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
TFR2-201ENST00000223051 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
TFR2-201ENST00000223051 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
TFR2-201ENST00000223051 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
TFR2-201ENST00000223051 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
TFR2-201ENST00000223051 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
TFR2-201ENST00000223051 SOGA1O94964 1423 aa22.3■■□□□ 1.16
TFR2-201ENST00000223051 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
TFR2-201ENST00000223051 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
TFR2-201ENST00000223051 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.161e-7■■□□□ 12.3
TFR2-201ENST00000223051 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
TFR2-201ENST00000223051 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.15
TFR2-201ENST00000223051 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
TFR2-201ENST00000223051 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
TFR2-201ENST00000223051 EEA1Q15075 1411 aa22.16■■□□□ 1.14
TFR2-201ENST00000223051 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
TFR2-201ENST00000223051 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
TFR2-201ENST00000223051 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
TFR2-201ENST00000223051 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
TFR2-201ENST00000223051 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
TFR2-201ENST00000223051 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
TFR2-201ENST00000223051 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
TFR2-201ENST00000223051 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
TFR2-201ENST00000223051 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
TFR2-201ENST00000223051 NEUROD1Q13562 356 aa21.9■■□□□ 1.1
TFR2-201ENST00000223051 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
TFR2-201ENST00000223051 CENPBP07199 599 aaPredicted RBP21.88■■□□□ 1.09
TFR2-201ENST00000223051 APLP2Q06481 763 aa21.87■■□□□ 1.09
TFR2-201ENST00000223051 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
TFR2-201ENST00000223051 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
TFR2-201ENST00000223051 CLIP1P30622 1438 aa21.86■■□□□ 1.09
TFR2-201ENST00000223051 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
TFR2-201ENST00000223051 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.09
TFR2-201ENST00000223051 ZNF316A6NFI3 1004 aaPredicted RBP21.82■■□□□ 1.08
TFR2-201ENST00000223051 KIF21BO75037 1637 aa21.77■■□□□ 1.08
TFR2-201ENST00000223051 GTF3C3Q9Y5Q9 886 aa21.74■■□□□ 1.07
TFR2-201ENST00000223051 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
TFR2-201ENST00000223051 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
TFR2-201ENST00000223051 YTHDC1Q96MU7 727 aaKnown RBP21.66■■□□□ 1.06
TFR2-201ENST00000223051 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
TFR2-201ENST00000223051 MIER1Q8N108 512 aa21.53■■□□□ 1.04
TFR2-201ENST00000223051 PRXQ9BXM0 1461 aa21.43■■□□□ 1.02
TFR2-201ENST00000223051 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
TFR2-201ENST00000223051 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
TFR2-201ENST00000223051 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
TFR2-201ENST00000223051 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
TFR2-201ENST00000223051 KIF27Q86VH2 1401 aa21.39■■□□□ 1.01
TFR2-201ENST00000223051 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
TFR2-201ENST00000223051 CUX1P39880 1505 aa21.34■■□□□ 1.01
TFR2-201ENST00000223051 DHX57Q6P158 1386 aaKnown RBP21.33■■□□□ 1.01
TFR2-201ENST00000223051 CLSPNQ9HAW4 1339 aa21.32■■□□□ 1
TFR2-201ENST00000223051 ITGAEP38570 1179 aa21.31■■□□□ 1
TFR2-201ENST00000223051 HMGXB3Q12766 1538 aa21.3■■□□□ 1
TFR2-201ENST00000223051 CFTRP13569 1480 aa21.23■□□□□ 0.99
TFR2-201ENST00000223051 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
TFR2-201ENST00000223051 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.99
TFR2-201ENST00000223051 ARHGAP35Q9NRY4 1499 aa21.2■□□□□ 0.98
TFR2-201ENST00000223051 CUX2O14529 1486 aa21.16■□□□□ 0.98
TFR2-201ENST00000223051 IGF1RP08069 1367 aa21.11■□□□□ 0.97
TFR2-201ENST00000223051 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.97
TFR2-201ENST00000223051 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
TFR2-201ENST00000223051 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
TFR2-201ENST00000223051 RAB3GAP2Q9H2M9 1393 aa21.04■□□□□ 0.96
TFR2-201ENST00000223051 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
TFR2-201ENST00000223051 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
TFR2-201ENST00000223051 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
TFR2-201ENST00000223051 TIAM1Q13009 1591 aa20.97■□□□□ 0.95
TFR2-201ENST00000223051 SETD5Q9C0A6 1442 aa20.94■□□□□ 0.94
TFR2-201ENST00000223051 LRRC9Q6ZRR7 1453 aa20.93■□□□□ 0.94
TFR2-201ENST00000223051 PHLDB1Q86UU1 1377 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms