RNA–Protein interactions for RNA: ENST00000525113.5

USP33-213, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-213ENST00000525113 NISCHQ9Y2I1 1504 aa43.51■■■■■ 4.56
USP33-213ENST00000525113 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
USP33-213ENST00000525113 ABCC9O60706 1549 aa37.97■■■■□ 3.67
USP33-213ENST00000525113 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
USP33-213ENST00000525113 NACADO15069 1562 aa36.49■■■■□ 3.43
USP33-213ENST00000525113 MYO15BQ96JP2 1530 aa36.26■■■■□ 3.4
USP33-213ENST00000525113 ZCCHC6Q5VYS8 1495 aaKnown RBP36.25■■■■□ 3.39
USP33-213ENST00000525113 DCAF8L2P0C7V8 631 aa36.19■■■■□ 3.38
USP33-213ENST00000525113 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
USP33-213ENST00000525113 UNC13AQ9UPW8 1703 aa35.84■■■■□ 3.33
USP33-213ENST00000525113 BICRAQ9NZM4 1560 aa35.47■■■■□ 3.27
USP33-213ENST00000525113 PABPN1Q86U42 306 aaKnown RBP eCLIP35.38■■■■□ 3.25
USP33-213ENST00000525113 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
USP33-213ENST00000525113 SHROOM4Q9ULL8 1493 aa35.11■■■■□ 3.21
USP33-213ENST00000525113 DNAJC5BQ9UF47 199 aa34.91■■■■□ 3.18
USP33-213ENST00000525113 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
USP33-213ENST00000525113 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
USP33-213ENST00000525113 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
USP33-213ENST00000525113 SMARCA4P51532 1647 aa33.83■■■■□ 3.01
USP33-213ENST00000525113 BAZ1AQ9NRL2 1556 aaPredicted RBP33.75■■■□□ 2.99
USP33-213ENST00000525113 NCAPD3P42695 1498 aa33.63■■■□□ 2.97
USP33-213ENST00000525113 ATAD2BQ9ULI0 1458 aa33.62■■■□□ 2.97
USP33-213ENST00000525113 SMARCA2P51531 1590 aa33.61■■■□□ 2.97
USP33-213ENST00000525113 PEG3Q9GZU2 1588 aa33.53■■■□□ 2.96
USP33-213ENST00000525113 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
USP33-213ENST00000525113 HMGXB3Q12766 1538 aa33.52■■■□□ 2.96
USP33-213ENST00000525113 BAZ1BQ9UIG0 1483 aaKnown RBP33.34■■■□□ 2.93
USP33-213ENST00000525113 WIZO95785 1651 aa33.19■■■□□ 2.9
USP33-213ENST00000525113 RSF1Q96T23 1441 aaPredicted RBP33.06■■■□□ 2.88
USP33-213ENST00000525113 NESP48681 1621 aa32.84■■■□□ 2.85
USP33-213ENST00000525113 TOP2AP11388 1531 aaKnown RBP32.83■■■□□ 2.85
USP33-213ENST00000525113 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
USP33-213ENST00000525113 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
USP33-213ENST00000525113 CADPSQ9ULU8 1353 aa32.6■■■□□ 2.81
USP33-213ENST00000525113 KIF21AQ7Z4S6 1674 aa32.56■■■□□ 2.8
USP33-213ENST00000525113 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
USP33-213ENST00000525113 CUX2O14529 1486 aa32.5■■■□□ 2.79
USP33-213ENST00000525113 THOC2Q8NI27 1593 aaKnown RBP32.47■■■□□ 2.79
USP33-213ENST00000525113 CFTRP13569 1480 aa32.42■■■□□ 2.78
USP33-213ENST00000525113 CCDC88BA6NC98 1476 aa32.38■■■□□ 2.77
USP33-213ENST00000525113 PRDM2Q13029 1718 aa32.34■■■□□ 2.77
USP33-213ENST00000525113 FANCD2Q9BXW9 1451 aa32.25■■■□□ 2.75
USP33-213ENST00000525113 CEP164Q9UPV0 1460 aa32.24■■■□□ 2.75
USP33-213ENST00000525113 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
USP33-213ENST00000525113 WDR62O43379 1518 aa32.17■■■□□ 2.74
USP33-213ENST00000525113 SUPT5HO00267 1087 aaKnown RBP31.99■■■□□ 2.71
USP33-213ENST00000525113 URB2Q14146 1524 aaKnown RBP31.95■■■□□ 2.71
USP33-213ENST00000525113 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
USP33-213ENST00000525113 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
USP33-213ENST00000525113 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
USP33-213ENST00000525113 IFT140Q96RY7 1462 aa31.57■■■□□ 2.64
USP33-213ENST00000525113 DNAJC5Q9H3Z4 198 aa31.54■■■□□ 2.64
USP33-213ENST00000525113 POLA1P09884 1462 aaPredicted RBP31.47■■■□□ 2.63
USP33-213ENST00000525113 CUX1P39880 1505 aa31.46■■■□□ 2.63
USP33-213ENST00000525113 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
USP33-213ENST00000525113 ZNF608Q9ULD9 1512 aaPredicted RBP31.42■■■□□ 2.62
USP33-213ENST00000525113 FGD5Q6ZNL6 1462 aa31.37■■■□□ 2.61
USP33-213ENST00000525113 EIF4G3O43432 1585 aaKnown RBP31.37■■■□□ 2.61
USP33-213ENST00000525113 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
USP33-213ENST00000525113 SOGA1O94964 1423 aa31.27■■■□□ 2.6
USP33-213ENST00000525113 WDR97A6NE52 1622 aa31.24■■■□□ 2.59
USP33-213ENST00000525113 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
USP33-213ENST00000525113 TOP2BQ02880 1626 aa31.2■■■□□ 2.58
USP33-213ENST00000525113 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.586e-7■■□□□ 11.9
USP33-213ENST00000525113 WRNQ14191 1432 aaPredicted RBP eCLIP31.18■■■□□ 2.58
USP33-213ENST00000525113 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
USP33-213ENST00000525113 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
USP33-213ENST00000525113 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
USP33-213ENST00000525113 CHD1O14646 1710 aa31.03■■■□□ 2.56
USP33-213ENST00000525113 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
USP33-213ENST00000525113 PBRM1Q86U86 1689 aa31.01■■■□□ 2.55
USP33-213ENST00000525113 OSCARQ8IYS5 282 aa31.01■■■□□ 2.55
USP33-213ENST00000525113 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
USP33-213ENST00000525113 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.54
USP33-213ENST00000525113 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.54
USP33-213ENST00000525113 MAGI1Q96QZ7 1491 aaPredicted RBP30.93■■■□□ 2.54
USP33-213ENST00000525113 SYNJ2O15056 1496 aa30.79■■■□□ 2.52
USP33-213ENST00000525113 FBLN2P98095 1184 aa30.75■■■□□ 2.51
USP33-213ENST00000525113 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
USP33-213ENST00000525113 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
USP33-213ENST00000525113 CHMP7Q8WUX9 453 aaPredicted RBP30.68■■■□□ 2.5
USP33-213ENST00000525113 RIMBP3CA6NJZ7 1639 aa30.67■■■□□ 2.5
USP33-213ENST00000525113 RIMBP3BA6NNM3 1639 aa30.67■■■□□ 2.5
USP33-213ENST00000525113 RIMBP3Q9UFD9 1639 aa30.67■■■□□ 2.5
USP33-213ENST00000525113 CLASP1Q7Z460 1538 aa30.66■■■□□ 2.5
USP33-213ENST00000525113 ARHGEF11O15085 1522 aa30.62■■■□□ 2.49
USP33-213ENST00000525113 GRIN2AQ12879 1464 aa30.59■■■□□ 2.49
USP33-213ENST00000525113 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
USP33-213ENST00000525113 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
USP33-213ENST00000525113 CEP170Q5SW79 1584 aa30.47■■■□□ 2.47
USP33-213ENST00000525113 NUP160Q12769 1436 aa30.47■■■□□ 2.47
USP33-213ENST00000525113 CUL7Q14999 1698 aa30.45■■■□□ 2.46
USP33-213ENST00000525113 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
USP33-213ENST00000525113 IGF1RP08069 1367 aa30.39■■■□□ 2.45
USP33-213ENST00000525113 ARAP1Q96P48 1450 aa30.36■■■□□ 2.45
USP33-213ENST00000525113 SHROOM2Q13796 1616 aa30.32■■■□□ 2.44
USP33-213ENST00000525113 RUSC2Q8N2Y8 1516 aa30.28■■■□□ 2.44
USP33-213ENST00000525113 CARMIL1Q5VZK9 1371 aa30.21■■■□□ 2.43
USP33-213ENST00000525113 CYB5RLQ6IPT4 315 aa30.21■■■□□ 2.43
USP33-213ENST00000525113 ERCC6L2Q5T890 1561 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms