RNA–Protein interactions for RNA: ENST00000463194.1

RFC2-203, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-203ENST00000463194 NISCHQ9Y2I1 1504 aa47.45■■■■■ 5.19
RFC2-203ENST00000463194 CCDC180Q9P1Z9 1646 aa42.2■■■■■ 4.35
RFC2-203ENST00000463194 ABCC9O60706 1549 aa41.43■■■■■ 4.22
RFC2-203ENST00000463194 RB1CC1Q8TDY2 1594 aa39.81■■■■□ 3.96
RFC2-203ENST00000463194 NACADO15069 1562 aa39.77■■■■□ 3.96
RFC2-203ENST00000463194 DCAF8L2P0C7V8 631 aa39.67■■■■□ 3.94
RFC2-203ENST00000463194 MYO15BQ96JP2 1530 aa39.54■■■■□ 3.92
RFC2-203ENST00000463194 ZCCHC6Q5VYS8 1495 aaKnown RBP39.48■■■■□ 3.91
RFC2-203ENST00000463194 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
RFC2-203ENST00000463194 UNC13AQ9UPW8 1703 aa38.82■■■■□ 3.8
RFC2-203ENST00000463194 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
RFC2-203ENST00000463194 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
RFC2-203ENST00000463194 SCRIBQ14160 1630 aa38.43■■■■□ 3.74
RFC2-203ENST00000463194 SHROOM4Q9ULL8 1493 aa38.26■■■■□ 3.72
RFC2-203ENST00000463194 DNAJC5BQ9UF47 199 aa38.24■■■■□ 3.71
RFC2-203ENST00000463194 EIF4G1Q04637 1599 aaKnown RBP37.59■■■■□ 3.61
RFC2-203ENST00000463194 CC2D2AQ9P2K1 1620 aa37.47■■■■□ 3.59
RFC2-203ENST00000463194 CECR2Q9BXF3 1484 aa37.27■■■■□ 3.56
RFC2-203ENST00000463194 SMARCA4P51532 1647 aa36.8■■■■□ 3.48
RFC2-203ENST00000463194 BAZ1AQ9NRL2 1556 aaPredicted RBP36.77■■■■□ 3.48
RFC2-203ENST00000463194 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
RFC2-203ENST00000463194 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
RFC2-203ENST00000463194 SMARCA2P51531 1590 aa36.63■■■■□ 3.45
RFC2-203ENST00000463194 MROH2BQ7Z745 1585 aa36.53■■■■□ 3.44
RFC2-203ENST00000463194 PEG3Q9GZU2 1588 aa36.5■■■■□ 3.43
RFC2-203ENST00000463194 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
RFC2-203ENST00000463194 BAZ1BQ9UIG0 1483 aaKnown RBP36.35■■■■□ 3.41
RFC2-203ENST00000463194 RSF1Q96T23 1441 aaPredicted RBP36.1■■■■□ 3.37
RFC2-203ENST00000463194 WIZO95785 1651 aa36.08■■■■□ 3.37
RFC2-203ENST00000463194 NESP48681 1621 aa35.8■■■■□ 3.32
RFC2-203ENST00000463194 TOP2AP11388 1531 aaKnown RBP35.74■■■■□ 3.31
RFC2-203ENST00000463194 ERCC6Q03468 1493 aa35.73■■■■□ 3.31
RFC2-203ENST00000463194 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
RFC2-203ENST00000463194 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
RFC2-203ENST00000463194 PDS5BQ9NTI5 1447 aa35.54■■■■□ 3.28
RFC2-203ENST00000463194 CUX2O14529 1486 aa35.46■■■■□ 3.27
RFC2-203ENST00000463194 CFTRP13569 1480 aa35.4■■■■□ 3.26
RFC2-203ENST00000463194 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
RFC2-203ENST00000463194 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
RFC2-203ENST00000463194 THOC2Q8NI27 1593 aaKnown RBP35.28■■■■□ 3.24
RFC2-203ENST00000463194 FANCD2Q9BXW9 1451 aa35.19■■■■□ 3.22
RFC2-203ENST00000463194 MRC2Q9UBG0 1479 aa35.15■■■■□ 3.22
RFC2-203ENST00000463194 CEP164Q9UPV0 1460 aa35.15■■■■□ 3.22
RFC2-203ENST00000463194 WDR62O43379 1518 aa35.02■■■■□ 3.2
RFC2-203ENST00000463194 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
RFC2-203ENST00000463194 PRDM2Q13029 1718 aa34.98■■■■□ 3.19
RFC2-203ENST00000463194 URB2Q14146 1524 aaKnown RBP34.84■■■■□ 3.17
RFC2-203ENST00000463194 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
RFC2-203ENST00000463194 DNAJC5Q9H3Z4 198 aa34.61■■■■□ 3.13
RFC2-203ENST00000463194 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
RFC2-203ENST00000463194 DNMBPQ6XZF7 1577 aa34.54■■■■□ 3.12
RFC2-203ENST00000463194 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
RFC2-203ENST00000463194 POLA1P09884 1462 aaPredicted RBP34.3■■■■□ 3.08
RFC2-203ENST00000463194 CUX1P39880 1505 aa34.27■■■■□ 3.08
RFC2-203ENST00000463194 ZNF608Q9ULD9 1512 aaPredicted RBP34.26■■■■□ 3.08
RFC2-203ENST00000463194 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
RFC2-203ENST00000463194 SOGA1O94964 1423 aa34.19■■■■□ 3.06
RFC2-203ENST00000463194 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
RFC2-203ENST00000463194 RAD54L2Q9Y4B4 1467 aa34.14■■■■□ 3.06
RFC2-203ENST00000463194 EIF4G3O43432 1585 aaKnown RBP34.08■■■■□ 3.05
RFC2-203ENST00000463194 AQRO60306 1485 aaKnown RBP eCLIP34.07■■■■□ 3.051e-6■■■□□ 18.9
RFC2-203ENST00000463194 WRNQ14191 1432 aaPredicted RBP eCLIP34.03■■■■□ 3.04
RFC2-203ENST00000463194 OSCARQ8IYS5 282 aa34.01■■■■□ 3.03
RFC2-203ENST00000463194 TDRD9Q8NDG6 1382 aaKnown RBP34■■■■□ 3.03
RFC2-203ENST00000463194 WDR97A6NE52 1622 aa33.98■■■■□ 3.03
RFC2-203ENST00000463194 TOP2BQ02880 1626 aa33.94■■■■□ 3.02
RFC2-203ENST00000463194 BIVM-ERCC5R4GMW8 1640 aa33.92■■■■□ 3.02
RFC2-203ENST00000463194 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
RFC2-203ENST00000463194 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
RFC2-203ENST00000463194 GRIN2BQ13224 1484 aa33.8■■■■□ 3
RFC2-203ENST00000463194 GAPVD1Q14C86 1478 aa33.77■■■■□ 3
RFC2-203ENST00000463194 MAGI1Q96QZ7 1491 aaPredicted RBP33.73■■■□□ 2.99
RFC2-203ENST00000463194 SNAPC4Q5SXM2 1469 aa33.72■■■□□ 2.99
RFC2-203ENST00000463194 ABCA5Q8WWZ7 1642 aa33.71■■■□□ 2.99
RFC2-203ENST00000463194 FBLN2P98095 1184 aa33.68■■■□□ 2.98
RFC2-203ENST00000463194 CHD1O14646 1710 aa33.65■■■□□ 2.98
RFC2-203ENST00000463194 CHMP7Q8WUX9 453 aaPredicted RBP33.62■■■□□ 2.97
RFC2-203ENST00000463194 PBRM1Q86U86 1689 aa33.61■■■□□ 2.97
RFC2-203ENST00000463194 SYNJ2O15056 1496 aa33.59■■■□□ 2.97
RFC2-203ENST00000463194 ERICH3Q5RHP9 1530 aa33.47■■■□□ 2.95
RFC2-203ENST00000463194 FHAD1B1AJZ9 1412 aa33.4■■■□□ 2.94
RFC2-203ENST00000463194 ADAMTS12P58397 1594 aa33.38■■■□□ 2.93
RFC2-203ENST00000463194 ARHGEF11O15085 1522 aa33.38■■■□□ 2.93
RFC2-203ENST00000463194 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
RFC2-203ENST00000463194 RIMBP3CA6NJZ7 1639 aa33.36■■■□□ 2.93
RFC2-203ENST00000463194 RIMBP3BA6NNM3 1639 aa33.36■■■□□ 2.93
RFC2-203ENST00000463194 RIMBP3Q9UFD9 1639 aa33.36■■■□□ 2.93
RFC2-203ENST00000463194 GRIN2AQ12879 1464 aa33.35■■■□□ 2.93
RFC2-203ENST00000463194 KIF27Q86VH2 1401 aa33.35■■■□□ 2.93
RFC2-203ENST00000463194 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
RFC2-203ENST00000463194 IGF1RP08069 1367 aa33.26■■■□□ 2.92
RFC2-203ENST00000463194 NUP160Q12769 1436 aa33.24■■■□□ 2.91
RFC2-203ENST00000463194 CEP170Q5SW79 1584 aa33.15■■■□□ 2.9
RFC2-203ENST00000463194 CYB5RLQ6IPT4 315 aa33.11■■■□□ 2.89
RFC2-203ENST00000463194 ARAP1Q96P48 1450 aa33.1■■■□□ 2.89
RFC2-203ENST00000463194 CUL7Q14999 1698 aa33.09■■■□□ 2.89
RFC2-203ENST00000463194 CARMIL1Q5VZK9 1371 aa33.04■■■□□ 2.88
RFC2-203ENST00000463194 SHROOM2Q13796 1616 aa32.96■■■□□ 2.87
RFC2-203ENST00000463194 RUSC2Q8N2Y8 1516 aa32.95■■■□□ 2.87
RFC2-203ENST00000463194 JPH4Q96JJ6 628 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms