RNA–Protein interactions for RNA: ENST00000480753.1

SSFA2-212, Transcript of Sperm-specific antigen 2, humanhuman

TSL 2

Gene SSFA2, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-212ENST00000480753 NISCHQ9Y2I1 1504 aa39.17■■■■□ 3.86
SSFA2-212ENST00000480753 CCDC180Q9P1Z9 1646 aa33.57■■■□□ 2.97
SSFA2-212ENST00000480753 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
SSFA2-212ENST00000480753 ZCCHC6Q5VYS8 1495 aaKnown RBP33■■■□□ 2.87
SSFA2-212ENST00000480753 DCAF8L2P0C7V8 631 aa32.81■■■□□ 2.84
SSFA2-212ENST00000480753 SUPT5HO00267 1087 aaKnown RBP32.09■■■□□ 2.73
SSFA2-212ENST00000480753 DCAF1Q9Y4B6 1507 aa32.09■■■□□ 2.73
SSFA2-212ENST00000480753 ABCC9O60706 1549 aa31.75■■■□□ 2.67
SSFA2-212ENST00000480753 SCRIBQ14160 1630 aa31.45■■■□□ 2.63
SSFA2-212ENST00000480753 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
SSFA2-212ENST00000480753 NACADO15069 1562 aa31.21■■■□□ 2.59
SSFA2-212ENST00000480753 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
SSFA2-212ENST00000480753 CHIC1Q5VXU3 224 aa30.82■■■□□ 2.52
SSFA2-212ENST00000480753 RSF1Q96T23 1441 aaPredicted RBP30.76■■■□□ 2.52
SSFA2-212ENST00000480753 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
SSFA2-212ENST00000480753 MROH2BQ7Z745 1585 aa30.44■■■□□ 2.46
SSFA2-212ENST00000480753 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
SSFA2-212ENST00000480753 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.43
SSFA2-212ENST00000480753 WIZO95785 1651 aa30.25■■■□□ 2.43
SSFA2-212ENST00000480753 BAZ1AQ9NRL2 1556 aaPredicted RBP30.14■■■□□ 2.42
SSFA2-212ENST00000480753 HRCP23327 699 aa30.11■■■□□ 2.41
SSFA2-212ENST00000480753 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
SSFA2-212ENST00000480753 SMARCA4P51532 1647 aa29.97■■■□□ 2.39
SSFA2-212ENST00000480753 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
SSFA2-212ENST00000480753 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
SSFA2-212ENST00000480753 TOP2AP11388 1531 aaKnown RBP29.75■■■□□ 2.35
SSFA2-212ENST00000480753 FAM9AQ8IZU1 332 aaPredicted RBP29.71■■■□□ 2.35
SSFA2-212ENST00000480753 PCGF6Q9BYE7 350 aa29.67■■■□□ 2.34
SSFA2-212ENST00000480753 CCDC88BA6NC98 1476 aa29.62■■■□□ 2.33
SSFA2-212ENST00000480753 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
SSFA2-212ENST00000480753 EHMT2Q96KQ7 1210 aa29.52■■■□□ 2.32
SSFA2-212ENST00000480753 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
SSFA2-212ENST00000480753 PPARGC1BQ86YN6 1023 aaKnown RBP29.4■■■□□ 2.3
SSFA2-212ENST00000480753 PEG3Q9GZU2 1588 aa29.38■■■□□ 2.29
SSFA2-212ENST00000480753 ABCC8Q09428 1581 aa29.37■■■□□ 2.29
SSFA2-212ENST00000480753 ATAD2BQ9ULI0 1458 aa29.37■■■□□ 2.29
SSFA2-212ENST00000480753 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
SSFA2-212ENST00000480753 SOGA1O94964 1423 aa28.96■■■□□ 2.23
SSFA2-212ENST00000480753 TRIM26Q12899 539 aaPredicted RBP28.94■■■□□ 2.22
SSFA2-212ENST00000480753 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
SSFA2-212ENST00000480753 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
SSFA2-212ENST00000480753 RUSC2Q8N2Y8 1516 aa28.85■■■□□ 2.21
SSFA2-212ENST00000480753 HMGXB3Q12766 1538 aa28.82■■■□□ 2.2
SSFA2-212ENST00000480753 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
SSFA2-212ENST00000480753 CSRNP3Q8WYN3 585 aa28.73■■■□□ 2.19
SSFA2-212ENST00000480753 EEA1Q15075 1411 aa28.64■■■□□ 2.18
SSFA2-212ENST00000480753 UBTFP17480 764 aaKnown RBP28.62■■■□□ 2.17
SSFA2-212ENST00000480753 ZEB1P37275 1124 aaPredicted RBP28.57■■■□□ 2.16
SSFA2-212ENST00000480753 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
SSFA2-212ENST00000480753 CEP162Q5TB80 1403 aa28.51■■■□□ 2.16
SSFA2-212ENST00000480753 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
SSFA2-212ENST00000480753 CFTRP13569 1480 aa28.48■■■□□ 2.15
SSFA2-212ENST00000480753 TNIKQ9UKE5 1360 aa28.48■■■□□ 2.15
SSFA2-212ENST00000480753 GOLGA3Q08378 1498 aa28.46■■■□□ 2.15
SSFA2-212ENST00000480753 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.14
SSFA2-212ENST00000480753 CUX1P39880 1505 aa28.38■■■□□ 2.13
SSFA2-212ENST00000480753 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
SSFA2-212ENST00000480753 CEP164Q9UPV0 1460 aa28.36■■■□□ 2.13
SSFA2-212ENST00000480753 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
SSFA2-212ENST00000480753 RANGAP1P46060 587 aaPredicted RBP28.3■■■□□ 2.12
SSFA2-212ENST00000480753 KIF21BO75037 1637 aa28.28■■■□□ 2.12
SSFA2-212ENST00000480753 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
SSFA2-212ENST00000480753 RAPGEF2Q9Y4G8 1499 aa28.28■■■□□ 2.12
SSFA2-212ENST00000480753 PRDM2Q13029 1718 aa28.18■■■□□ 2.1
SSFA2-212ENST00000480753 SCAF1Q9H7N4 1312 aaKnown RBP28.14■■■□□ 2.1
SSFA2-212ENST00000480753 CLIP1P30622 1438 aa28.13■■■□□ 2.09
SSFA2-212ENST00000480753 KIF27Q86VH2 1401 aa28.1■■■□□ 2.09
SSFA2-212ENST00000480753 NESP48681 1621 aa28.08■■■□□ 2.09
SSFA2-212ENST00000480753 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
SSFA2-212ENST00000480753 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
SSFA2-212ENST00000480753 PRXQ9BXM0 1461 aa28.03■■■□□ 2.08
SSFA2-212ENST00000480753 CUX2O14529 1486 aa27.99■■■□□ 2.07
SSFA2-212ENST00000480753 FGD5Q6ZNL6 1462 aa27.99■■■□□ 2.07
SSFA2-212ENST00000480753 ERICH3Q5RHP9 1530 aa27.94■■■□□ 2.06
SSFA2-212ENST00000480753 VPS8Q8N3P4 1428 aa27.89■■■□□ 2.06
SSFA2-212ENST00000480753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.86■■■□□ 2.05
SSFA2-212ENST00000480753 IGF1RP08069 1367 aa27.84■■■□□ 2.05
SSFA2-212ENST00000480753 APLP2Q06481 763 aa27.82■■■□□ 2.04
SSFA2-212ENST00000480753 RAD54L2Q9Y4B4 1467 aa27.81■■■□□ 2.04
SSFA2-212ENST00000480753 TOPBP1Q92547 1522 aa27.79■■■□□ 2.04
SSFA2-212ENST00000480753 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
SSFA2-212ENST00000480753 LAMC3Q9Y6N6 1575 aa27.76■■■□□ 2.03
SSFA2-212ENST00000480753 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
SSFA2-212ENST00000480753 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
SSFA2-212ENST00000480753 ARAP1Q96P48 1450 aa27.73■■■□□ 2.03
SSFA2-212ENST00000480753 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
SSFA2-212ENST00000480753 URB2Q14146 1524 aaKnown RBP27.67■■■□□ 2.02
SSFA2-212ENST00000480753 ACIN1Q9UKV3 1341 aaKnown RBP27.65■■■□□ 2.02
SSFA2-212ENST00000480753 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.01
SSFA2-212ENST00000480753 ABCA10Q8WWZ4 1543 aa27.61■■■□□ 2.01
SSFA2-212ENST00000480753 ARHGAP35Q9NRY4 1499 aa27.61■■■□□ 2.01
SSFA2-212ENST00000480753 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
SSFA2-212ENST00000480753 NEUROD1Q13562 356 aa27.57■■■□□ 2
SSFA2-212ENST00000480753 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
SSFA2-212ENST00000480753 KANK4Q5T7N3 995 aaPredicted RBP27.54■■■□□ 2
SSFA2-212ENST00000480753 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
SSFA2-212ENST00000480753 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
SSFA2-212ENST00000480753 DIEXFQ68CQ4 756 aaKnown RBP27.45■■□□□ 1.98
SSFA2-212ENST00000480753 WDR97A6NE52 1622 aa27.39■■□□□ 1.98
SSFA2-212ENST00000480753 CENPBP07199 599 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms