RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
DFFA-201ENST00000377036 CCDC180Q9P1Z9 1646 aa35.8■■■■□ 3.32
DFFA-201ENST00000377036 ABCC9O60706 1549 aa34.39■■■■□ 3.1
DFFA-201ENST00000377036 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
DFFA-201ENST00000377036 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
DFFA-201ENST00000377036 DCAF8L2P0C7V8 631 aa33.66■■■□□ 2.98
DFFA-201ENST00000377036 MYO15BQ96JP2 1530 aa33.64■■■□□ 2.98
DFFA-201ENST00000377036 NACADO15069 1562 aa33.58■■■□□ 2.97
DFFA-201ENST00000377036 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
DFFA-201ENST00000377036 SCRIBQ14160 1630 aa32.64■■■□□ 2.82
DFFA-201ENST00000377036 UNC13AQ9UPW8 1703 aa32.44■■■□□ 2.78
DFFA-201ENST00000377036 SHROOM4Q9ULL8 1493 aa32.34■■■□□ 2.77
DFFA-201ENST00000377036 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
DFFA-201ENST00000377036 PABPN1Q86U42 306 aaKnown RBP eCLIP32.26■■■□□ 2.75
DFFA-201ENST00000377036 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
DFFA-201ENST00000377036 BAZ1AQ9NRL2 1556 aaPredicted RBP31.45■■■□□ 2.63
DFFA-201ENST00000377036 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
DFFA-201ENST00000377036 SMARCA4P51532 1647 aa31.32■■■□□ 2.6
DFFA-201ENST00000377036 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
DFFA-201ENST00000377036 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
DFFA-201ENST00000377036 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
DFFA-201ENST00000377036 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
DFFA-201ENST00000377036 PEG3Q9GZU2 1588 aa31.06■■■□□ 2.56
DFFA-201ENST00000377036 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
DFFA-201ENST00000377036 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
DFFA-201ENST00000377036 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
DFFA-201ENST00000377036 HMGXB3Q12766 1538 aa30.86■■■□□ 2.53
DFFA-201ENST00000377036 WIZO95785 1651 aa30.85■■■□□ 2.53
DFFA-201ENST00000377036 BAZ1BQ9UIG0 1483 aaKnown RBP30.84■■■□□ 2.53
DFFA-201ENST00000377036 SUPT5HO00267 1087 aaKnown RBP30.81■■■□□ 2.52
DFFA-201ENST00000377036 TOP2AP11388 1531 aaKnown RBP30.69■■■□□ 2.5
DFFA-201ENST00000377036 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
DFFA-201ENST00000377036 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
DFFA-201ENST00000377036 CFTRP13569 1480 aa30.05■■■□□ 2.4
DFFA-201ENST00000377036 LAMC3Q9Y6N6 1575 aa30.04■■■□□ 2.4
DFFA-201ENST00000377036 PDS5BQ9NTI5 1447 aa29.89■■■□□ 2.38
DFFA-201ENST00000377036 NESP48681 1621 aa29.89■■■□□ 2.38
DFFA-201ENST00000377036 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
DFFA-201ENST00000377036 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
DFFA-201ENST00000377036 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
DFFA-201ENST00000377036 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
DFFA-201ENST00000377036 KIF21AQ7Z4S6 1674 aa29.51■■■□□ 2.31
DFFA-201ENST00000377036 MRC2Q9UBG0 1479 aa29.47■■■□□ 2.31
DFFA-201ENST00000377036 ABCC8Q09428 1581 aa29.46■■■□□ 2.31
DFFA-201ENST00000377036 WRNQ14191 1432 aaPredicted RBP eCLIP29.4■■■□□ 2.3
DFFA-201ENST00000377036 WDR62O43379 1518 aa29.33■■■□□ 2.29
DFFA-201ENST00000377036 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
DFFA-201ENST00000377036 DNMBPQ6XZF7 1577 aa29.33■■■□□ 2.29
DFFA-201ENST00000377036 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
DFFA-201ENST00000377036 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
DFFA-201ENST00000377036 CUX1P39880 1505 aa29.27■■■□□ 2.28
DFFA-201ENST00000377036 TOP2BQ02880 1626 aa29.21■■■□□ 2.27
DFFA-201ENST00000377036 CUX2O14529 1486 aa29.18■■■□□ 2.26
DFFA-201ENST00000377036 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
DFFA-201ENST00000377036 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
DFFA-201ENST00000377036 TRIM41Q8WV44 630 aa29.15■■■□□ 2.26
DFFA-201ENST00000377036 CHIC1Q5VXU3 224 aa29.12■■■□□ 2.25
DFFA-201ENST00000377036 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
DFFA-201ENST00000377036 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
DFFA-201ENST00000377036 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
DFFA-201ENST00000377036 SOGA1O94964 1423 aa29.03■■■□□ 2.24
DFFA-201ENST00000377036 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
DFFA-201ENST00000377036 ABCA10Q8WWZ4 1543 aa28.91■■■□□ 2.22
DFFA-201ENST00000377036 TARBP1Q13395 1621 aaKnown RBP28.88■■■□□ 2.21
DFFA-201ENST00000377036 WDR97A6NE52 1622 aa28.83■■■□□ 2.2
DFFA-201ENST00000377036 KIF27Q86VH2 1401 aa28.78■■■□□ 2.2
DFFA-201ENST00000377036 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
DFFA-201ENST00000377036 ZNF608Q9ULD9 1512 aaPredicted RBP28.73■■■□□ 2.19
DFFA-201ENST00000377036 GAPVD1Q14C86 1478 aa28.7■■■□□ 2.19
DFFA-201ENST00000377036 EEA1Q15075 1411 aa28.69■■■□□ 2.18
DFFA-201ENST00000377036 AQRO60306 1485 aaKnown RBP eCLIP28.68■■■□□ 2.181e-6■■■■□ 23.2
DFFA-201ENST00000377036 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
DFFA-201ENST00000377036 GRIN2BQ13224 1484 aa28.64■■■□□ 2.18
DFFA-201ENST00000377036 EIF4G3O43432 1585 aaKnown RBP28.64■■■□□ 2.18
DFFA-201ENST00000377036 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
DFFA-201ENST00000377036 IGF1RP08069 1367 aa28.53■■■□□ 2.16
DFFA-201ENST00000377036 RUSC2Q8N2Y8 1516 aa28.51■■■□□ 2.15
DFFA-201ENST00000377036 MAGI1Q96QZ7 1491 aaPredicted RBP28.51■■■□□ 2.15
DFFA-201ENST00000377036 CSRNP3Q8WYN3 585 aa28.5■■■□□ 2.15
DFFA-201ENST00000377036 PBRM1Q86U86 1689 aa28.46■■■□□ 2.15
DFFA-201ENST00000377036 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
DFFA-201ENST00000377036 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
DFFA-201ENST00000377036 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
DFFA-201ENST00000377036 CUL7Q14999 1698 aa28.4■■■□□ 2.14
DFFA-201ENST00000377036 CARMIL1Q5VZK9 1371 aa28.4■■■□□ 2.14
DFFA-201ENST00000377036 SYNJ2O15056 1496 aa28.37■■■□□ 2.13
DFFA-201ENST00000377036 CHMP7Q8WUX9 453 aaPredicted RBP28.35■■■□□ 2.13
DFFA-201ENST00000377036 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
DFFA-201ENST00000377036 PRXQ9BXM0 1461 aa28.33■■■□□ 2.13
DFFA-201ENST00000377036 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
DFFA-201ENST00000377036 FBLN2P98095 1184 aa28.26■■■□□ 2.12
DFFA-201ENST00000377036 GRIN2AQ12879 1464 aa28.23■■■□□ 2.11
DFFA-201ENST00000377036 KIF21BO75037 1637 aa28.21■■■□□ 2.11
DFFA-201ENST00000377036 GOLGA3Q08378 1498 aa28.14■■■□□ 2.1
DFFA-201ENST00000377036 OSCARQ8IYS5 282 aa28.11■■■□□ 2.09
DFFA-201ENST00000377036 NUP160Q12769 1436 aa28.1■■■□□ 2.09
DFFA-201ENST00000377036 CHD1O14646 1710 aa28.09■■■□□ 2.09
DFFA-201ENST00000377036 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
DFFA-201ENST00000377036 KIAA0586Q9BVV6 1533 aa28.01■■■□□ 2.07
DFFA-201ENST00000377036 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms