RNA–Protein interactions for RNA: ENST00000599644.1

SIPA1L3-208, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 545 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-208ENST00000599644 NISCHQ9Y2I1 1504 aa49.02■■■■■ 5.44
SIPA1L3-208ENST00000599644 ABCC9O60706 1549 aa43.95■■■■■ 4.63
SIPA1L3-208ENST00000599644 CCDC180Q9P1Z9 1646 aa43.89■■■■■ 4.62
SIPA1L3-208ENST00000599644 RB1CC1Q8TDY2 1594 aa41.79■■■■■ 4.28
SIPA1L3-208ENST00000599644 NACADO15069 1562 aa41.51■■■■■ 4.24
SIPA1L3-208ENST00000599644 DCAF8L2P0C7V8 631 aa41.48■■■■■ 4.23
SIPA1L3-208ENST00000599644 DNAJC5BQ9UF47 199 aa41.24■■■■■ 4.19
SIPA1L3-208ENST00000599644 PABPN1Q86U42 306 aaKnown RBP eCLIP40.99■■■■■ 4.15
SIPA1L3-208ENST00000599644 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
SIPA1L3-208ENST00000599644 UNC13AQ9UPW8 1703 aa40.87■■■■■ 4.13
SIPA1L3-208ENST00000599644 ZCCHC6Q5VYS8 1495 aaKnown RBP40.62■■■■■ 4.09
SIPA1L3-208ENST00000599644 BICRAQ9NZM4 1560 aa40.61■■■■■ 4.09
SIPA1L3-208ENST00000599644 DCAF1Q9Y4B6 1507 aa40.43■■■■■ 4.06
SIPA1L3-208ENST00000599644 SCRIBQ14160 1630 aa40.09■■■■■ 4.01
SIPA1L3-208ENST00000599644 SHROOM4Q9ULL8 1493 aa39.96■■■■□ 3.99
SIPA1L3-208ENST00000599644 CC2D2AQ9P2K1 1620 aa39.67■■■■□ 3.94
SIPA1L3-208ENST00000599644 EIF4G1Q04637 1599 aaKnown RBP39.59■■■■□ 3.93
SIPA1L3-208ENST00000599644 CECR2Q9BXF3 1484 aa39.56■■■■□ 3.92
SIPA1L3-208ENST00000599644 NCAPD3P42695 1498 aa38.35■■■■□ 3.73
SIPA1L3-208ENST00000599644 ATAD2BQ9ULI0 1458 aa38.26■■■■□ 3.72
SIPA1L3-208ENST00000599644 SMARCA4P51532 1647 aa38.22■■■■□ 3.71
SIPA1L3-208ENST00000599644 SMARCA2P51531 1590 aa38.12■■■■□ 3.69
SIPA1L3-208ENST00000599644 HMGXB3Q12766 1538 aa38.03■■■■□ 3.68
SIPA1L3-208ENST00000599644 BAZ1AQ9NRL2 1556 aaPredicted RBP38.02■■■■□ 3.68
SIPA1L3-208ENST00000599644 ERCC6Q03468 1493 aa37.92■■■■□ 3.66
SIPA1L3-208ENST00000599644 BAZ1BQ9UIG0 1483 aaKnown RBP37.89■■■■□ 3.66
SIPA1L3-208ENST00000599644 MROH2BQ7Z745 1585 aa37.8■■■■□ 3.64
SIPA1L3-208ENST00000599644 PEG3Q9GZU2 1588 aa37.8■■■■□ 3.64
SIPA1L3-208ENST00000599644 NESP48681 1621 aa37.79■■■■□ 3.64
SIPA1L3-208ENST00000599644 CUX2O14529 1486 aa37.78■■■■□ 3.64
SIPA1L3-208ENST00000599644 DNAJC5Q9H3Z4 198 aa37.77■■■■□ 3.64
SIPA1L3-208ENST00000599644 LAMC3Q9Y6N6 1575 aa37.45■■■■□ 3.59
SIPA1L3-208ENST00000599644 WIZO95785 1651 aa37.35■■■■□ 3.57
SIPA1L3-208ENST00000599644 THOC2Q8NI27 1593 aaKnown RBP37.32■■■■□ 3.56
SIPA1L3-208ENST00000599644 PDS5BQ9NTI5 1447 aa37.27■■■■□ 3.56
SIPA1L3-208ENST00000599644 KIF21AQ7Z4S6 1674 aa37.26■■■■□ 3.56
SIPA1L3-208ENST00000599644 CADPSQ9ULU8 1353 aa37.21■■■■□ 3.55
SIPA1L3-208ENST00000599644 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
SIPA1L3-208ENST00000599644 MRC2Q9UBG0 1479 aa36.94■■■■□ 3.5
SIPA1L3-208ENST00000599644 TOP2AP11388 1531 aaKnown RBP36.84■■■■□ 3.49
SIPA1L3-208ENST00000599644 WDR62O43379 1518 aa36.82■■■■□ 3.48
SIPA1L3-208ENST00000599644 CEP164Q9UPV0 1460 aa36.8■■■■□ 3.48
SIPA1L3-208ENST00000599644 CFTRP13569 1480 aa36.78■■■■□ 3.48
SIPA1L3-208ENST00000599644 FANCD2Q9BXW9 1451 aa36.78■■■■□ 3.48
SIPA1L3-208ENST00000599644 URB2Q14146 1524 aaKnown RBP36.49■■■■□ 3.43
SIPA1L3-208ENST00000599644 CCDC88BA6NC98 1476 aa36.48■■■■□ 3.43
SIPA1L3-208ENST00000599644 PRDM2Q13029 1718 aa36.37■■■■□ 3.41
SIPA1L3-208ENST00000599644 TRIM41Q8WV44 630 aa36.2■■■■□ 3.39
SIPA1L3-208ENST00000599644 OSCARQ8IYS5 282 aa36.15■■■■□ 3.38
SIPA1L3-208ENST00000599644 TOPBP1Q92547 1522 aa36.09■■■■□ 3.37
SIPA1L3-208ENST00000599644 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
SIPA1L3-208ENST00000599644 ZNF608Q9ULD9 1512 aaPredicted RBP36.05■■■■□ 3.36
SIPA1L3-208ENST00000599644 ABCC8Q09428 1581 aa35.98■■■■□ 3.35
SIPA1L3-208ENST00000599644 DNMBPQ6XZF7 1577 aa35.94■■■■□ 3.34
SIPA1L3-208ENST00000599644 EIF4G3O43432 1585 aaKnown RBP35.8■■■■□ 3.32
SIPA1L3-208ENST00000599644 TARBP1Q13395 1621 aaKnown RBP35.75■■■■□ 3.31
SIPA1L3-208ENST00000599644 AQRO60306 1485 aaKnown RBP eCLIP35.74■■■■□ 3.31
SIPA1L3-208ENST00000599644 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
SIPA1L3-208ENST00000599644 RAD54L2Q9Y4B4 1467 aa35.64■■■■□ 3.3
SIPA1L3-208ENST00000599644 RIMBP3CA6NJZ7 1639 aa35.64■■■■□ 3.3
SIPA1L3-208ENST00000599644 RIMBP3BA6NNM3 1639 aa35.64■■■■□ 3.3
SIPA1L3-208ENST00000599644 RIMBP3Q9UFD9 1639 aa35.64■■■■□ 3.3
SIPA1L3-208ENST00000599644 SOGA1O94964 1423 aa35.59■■■■□ 3.29
SIPA1L3-208ENST00000599644 CHD1O14646 1710 aa35.54■■■■□ 3.28
SIPA1L3-208ENST00000599644 TDRD9Q8NDG6 1382 aaKnown RBP35.54■■■■□ 3.28
SIPA1L3-208ENST00000599644 SUPT5HO00267 1087 aaKnown RBP35.54■■■■□ 3.28
SIPA1L3-208ENST00000599644 FBLN2P98095 1184 aa35.53■■■■□ 3.28
SIPA1L3-208ENST00000599644 ARHGEF11O15085 1522 aa35.52■■■■□ 3.28
SIPA1L3-208ENST00000599644 FGD5Q6ZNL6 1462 aa35.52■■■■□ 3.28
SIPA1L3-208ENST00000599644 CUX1P39880 1505 aa35.51■■■■□ 3.27
SIPA1L3-208ENST00000599644 SNAPC4Q5SXM2 1469 aa35.35■■■■□ 3.25
SIPA1L3-208ENST00000599644 CYB5RLQ6IPT4 315 aa35.34■■■■□ 3.25
SIPA1L3-208ENST00000599644 WDR97A6NE52 1622 aa35.32■■■■□ 3.25
SIPA1L3-208ENST00000599644 CHMP7Q8WUX9 453 aaPredicted RBP35.25■■■■□ 3.23
SIPA1L3-208ENST00000599644 GRIN2BQ13224 1484 aa35.24■■■■□ 3.23
SIPA1L3-208ENST00000599644 MAGI1Q96QZ7 1491 aaPredicted RBP35.22■■■■□ 3.23
SIPA1L3-208ENST00000599644 ARAP1Q96P48 1450 aa35.2■■■■□ 3.23
SIPA1L3-208ENST00000599644 GAPVD1Q14C86 1478 aa35.15■■■■□ 3.22
SIPA1L3-208ENST00000599644 CLASP1Q7Z460 1538 aa35.11■■■■□ 3.21
SIPA1L3-208ENST00000599644 SYNJ2O15056 1496 aa35.11■■■■□ 3.21
SIPA1L3-208ENST00000599644 PBRM1Q86U86 1689 aa35.1■■■■□ 3.21
SIPA1L3-208ENST00000599644 ABCA10Q8WWZ4 1543 aa35.1■■■■□ 3.21
SIPA1L3-208ENST00000599644 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
SIPA1L3-208ENST00000599644 ABCA5Q8WWZ7 1642 aa35.03■■■■□ 3.2
SIPA1L3-208ENST00000599644 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
SIPA1L3-208ENST00000599644 TRHP20396 242 aaPredicted RBP34.93■■■■□ 3.18
SIPA1L3-208ENST00000599644 TOP2BQ02880 1626 aa34.92■■■■□ 3.18
SIPA1L3-208ENST00000599644 BIVM-ERCC5R4GMW8 1640 aa34.91■■■■□ 3.18
SIPA1L3-208ENST00000599644 GRIN2AQ12879 1464 aa34.79■■■■□ 3.16
SIPA1L3-208ENST00000599644 ADAMTS12P58397 1594 aa34.77■■■■□ 3.16
SIPA1L3-208ENST00000599644 FHAD1B1AJZ9 1412 aa34.69■■■■□ 3.14
SIPA1L3-208ENST00000599644 CEP170Q5SW79 1584 aa34.67■■■■□ 3.14
SIPA1L3-208ENST00000599644 NUP160Q12769 1436 aa34.67■■■■□ 3.14
SIPA1L3-208ENST00000599644 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
SIPA1L3-208ENST00000599644 ERCC6L2Q5T890 1561 aa34.64■■■■□ 3.14
SIPA1L3-208ENST00000599644 SHROOM2Q13796 1616 aa34.48■■■■□ 3.11
SIPA1L3-208ENST00000599644 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
SIPA1L3-208ENST00000599644 PRG4Q92954 1404 aaPredicted RBP34.37■■■■□ 3.09
SIPA1L3-208ENST00000599644 IGF1RP08069 1367 aa34.28■■■■□ 3.08
SIPA1L3-208ENST00000599644 KIF27Q86VH2 1401 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms