RNA–Protein interactions for RNA: ENST00000431877.6

SSFA2-205, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 5,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-205ENST00000431877 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
SSFA2-205ENST00000431877 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
SSFA2-205ENST00000431877 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
SSFA2-205ENST00000431877 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
SSFA2-205ENST00000431877 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.65
SSFA2-205ENST00000431877 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
SSFA2-205ENST00000431877 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
SSFA2-205ENST00000431877 PCGF6Q9BYE7 350 aa24.58■■□□□ 1.53
SSFA2-205ENST00000431877 APLP2Q06481 763 aa24.54■■□□□ 1.52
SSFA2-205ENST00000431877 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
SSFA2-205ENST00000431877 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
SSFA2-205ENST00000431877 UBTFP17480 764 aaKnown RBP24.12■■□□□ 1.45
SSFA2-205ENST00000431877 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
SSFA2-205ENST00000431877 ABCC9O60706 1549 aa23.91■■□□□ 1.42
SSFA2-205ENST00000431877 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
SSFA2-205ENST00000431877 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
SSFA2-205ENST00000431877 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
SSFA2-205ENST00000431877 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
SSFA2-205ENST00000431877 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
SSFA2-205ENST00000431877 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
SSFA2-205ENST00000431877 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
SSFA2-205ENST00000431877 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
SSFA2-205ENST00000431877 HRCP23327 699 aa23.44■■□□□ 1.34
SSFA2-205ENST00000431877 ZCCHC6Q5VYS8 1495 aaKnown RBP23.39■■□□□ 1.34
SSFA2-205ENST00000431877 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
SSFA2-205ENST00000431877 ITGAEP38570 1179 aa23.24■■□□□ 1.31
SSFA2-205ENST00000431877 HNRNPUL2Q1KMD3 747 aaKnown RBP23.21■■□□□ 1.31
SSFA2-205ENST00000431877 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
SSFA2-205ENST00000431877 YTHDC1Q96MU7 727 aaKnown RBP23.12■■□□□ 1.29
SSFA2-205ENST00000431877 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
SSFA2-205ENST00000431877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
SSFA2-205ENST00000431877 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
SSFA2-205ENST00000431877 NEFLP07196 543 aa22.73■■□□□ 1.23
SSFA2-205ENST00000431877 FAM50AQ14320 339 aaKnown RBP22.73■■□□□ 1.23
SSFA2-205ENST00000431877 MYT1LQ9UL68 1186 aa22.67■■□□□ 1.22
SSFA2-205ENST00000431877 POLR3GLQ9BT43 218 aa22.61■■□□□ 1.21
SSFA2-205ENST00000431877 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
SSFA2-205ENST00000431877 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
SSFA2-205ENST00000431877 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
SSFA2-205ENST00000431877 ERICH6Q7L0X2 663 aa22.49■■□□□ 1.19
SSFA2-205ENST00000431877 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
SSFA2-205ENST00000431877 FBLN2P98095 1184 aa22.47■■□□□ 1.19
SSFA2-205ENST00000431877 CNGB1Q14028 1251 aaPredicted RBP22.46■■□□□ 1.19
SSFA2-205ENST00000431877 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
SSFA2-205ENST00000431877 TRIM52Q96A61 297 aa22.45■■□□□ 1.18
SSFA2-205ENST00000431877 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
SSFA2-205ENST00000431877 NACADO15069 1562 aa22.39■■□□□ 1.17
SSFA2-205ENST00000431877 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
SSFA2-205ENST00000431877 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
SSFA2-205ENST00000431877 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
SSFA2-205ENST00000431877 CECR2Q9BXF3 1484 aa22.17■■□□□ 1.14
SSFA2-205ENST00000431877 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
SSFA2-205ENST00000431877 ZNF777Q9ULD5 760 aaPredicted RBP22.05■■□□□ 1.12
SSFA2-205ENST00000431877 SLC4A1APQ9BWU0 796 aaKnown RBP22.04■■□□□ 1.12
SSFA2-205ENST00000431877 CLIP1P30622 1438 aa22.04■■□□□ 1.12
SSFA2-205ENST00000431877 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
SSFA2-205ENST00000431877 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
SSFA2-205ENST00000431877 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
SSFA2-205ENST00000431877 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
SSFA2-205ENST00000431877 ANP32CO43423 234 aa22.02■■□□□ 1.12
SSFA2-205ENST00000431877 EEA1Q15075 1411 aa22■■□□□ 1.11
SSFA2-205ENST00000431877 GTF3C3Q9Y5Q9 886 aa21.99■■□□□ 1.11
SSFA2-205ENST00000431877 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
SSFA2-205ENST00000431877 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
SSFA2-205ENST00000431877 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
SSFA2-205ENST00000431877 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.09
SSFA2-205ENST00000431877 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
SSFA2-205ENST00000431877 BCANQ96GW7 911 aa21.83■■□□□ 1.08
SSFA2-205ENST00000431877 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
SSFA2-205ENST00000431877 TONSLQ96HA7 1378 aa21.81■■□□□ 1.08
SSFA2-205ENST00000431877 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
SSFA2-205ENST00000431877 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
SSFA2-205ENST00000431877 MYT1Q01538 1121 aa21.76■■□□□ 1.07
SSFA2-205ENST00000431877 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
SSFA2-205ENST00000431877 DAXXQ9UER7 740 aaPredicted RBP21.75■■□□□ 1.07
SSFA2-205ENST00000431877 CHMP7Q8WUX9 453 aaPredicted RBP21.75■■□□□ 1.07
SSFA2-205ENST00000431877 SOGA1O94964 1423 aa21.72■■□□□ 1.07
SSFA2-205ENST00000431877 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
SSFA2-205ENST00000431877 DDX10Q13206 875 aaKnown RBP21.69■■□□□ 1.06
SSFA2-205ENST00000431877 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
SSFA2-205ENST00000431877 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
SSFA2-205ENST00000431877 TSPY4P0CV99 314 aa21.57■■□□□ 1.04
SSFA2-205ENST00000431877 TSPY10P0CW01 314 aa21.57■■□□□ 1.04
SSFA2-205ENST00000431877 RRP7BPQ9NSQ0 103 aa21.57■■□□□ 1.04
SSFA2-205ENST00000431877 WIZO95785 1651 aa21.54■■□□□ 1.04
SSFA2-205ENST00000431877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.53■■□□□ 1.041e-6■■■□□ 15.9
SSFA2-205ENST00000431877 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.04
SSFA2-205ENST00000431877 HIRIP3Q9BW71 556 aaPredicted RBP21.51■■□□□ 1.03
SSFA2-205ENST00000431877 MIER1Q8N108 512 aa21.5■■□□□ 1.03
SSFA2-205ENST00000431877 CUX2O14529 1486 aa21.48■■□□□ 1.03
SSFA2-205ENST00000431877 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
SSFA2-205ENST00000431877 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
SSFA2-205ENST00000431877 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
SSFA2-205ENST00000431877 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
SSFA2-205ENST00000431877 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
SSFA2-205ENST00000431877 PLEKHD1A6NEE1 506 aa21.43■■□□□ 1.02
SSFA2-205ENST00000431877 KDM2AQ9Y2K7 1162 aa21.42■■□□□ 1.02
SSFA2-205ENST00000431877 FAM9BQ8IZU0 186 aa21.41■■□□□ 1.02
SSFA2-205ENST00000431877 KCNH8Q96L42 1107 aa21.38■■□□□ 1.01
SSFA2-205ENST00000431877 FKBP8Q14318 412 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms