RNA–Protein interactions for RNA: ENST00000420371.2

RAPH1-206, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

TSL 3

Gene RAPH1, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-206ENST00000420371 NISCHQ9Y2I1 1504 aa59.11■■■■■ 7.05
RAPH1-206ENST00000420371 ABCC9O60706 1549 aa53.21■■■■■ 6.11
RAPH1-206ENST00000420371 CCDC180Q9P1Z9 1646 aa53.09■■■■■ 6.09
RAPH1-206ENST00000420371 RB1CC1Q8TDY2 1594 aa50.55■■■■■ 5.68
RAPH1-206ENST00000420371 NACADO15069 1562 aa50.15■■■■■ 5.62
RAPH1-206ENST00000420371 DCAF8L2P0C7V8 631 aa50.08■■■■■ 5.61
RAPH1-206ENST00000420371 DNAJC5BQ9UF47 199 aa49.91■■■■■ 5.58
RAPH1-206ENST00000420371 UNC13AQ9UPW8 1703 aa49.57■■■■■ 5.53
RAPH1-206ENST00000420371 PABPN1Q86U42 306 aaKnown RBP eCLIP49.54■■■■■ 5.52
RAPH1-206ENST00000420371 MYO15BQ96JP2 1530 aa49.34■■■■■ 5.49
RAPH1-206ENST00000420371 BICRAQ9NZM4 1560 aa49.11■■■■■ 5.45
RAPH1-206ENST00000420371 ZCCHC6Q5VYS8 1495 aaKnown RBP48.96■■■■■ 5.43
RAPH1-206ENST00000420371 DCAF1Q9Y4B6 1507 aa48.73■■■■■ 5.39
RAPH1-206ENST00000420371 SCRIBQ14160 1630 aa48.48■■■■■ 5.35
RAPH1-206ENST00000420371 SHROOM4Q9ULL8 1493 aa48.27■■■■■ 5.32
RAPH1-206ENST00000420371 CC2D2AQ9P2K1 1620 aa48.05■■■■■ 5.28
RAPH1-206ENST00000420371 EIF4G1Q04637 1599 aaKnown RBP47.9■■■■■ 5.26
RAPH1-206ENST00000420371 CECR2Q9BXF3 1484 aa47.88■■■■■ 5.26
RAPH1-206ENST00000420371 NCAPD3P42695 1498 aa46.26■■■■■ 5
RAPH1-206ENST00000420371 SMARCA4P51532 1647 aa46.17■■■■■ 4.98
RAPH1-206ENST00000420371 ATAD2BQ9ULI0 1458 aa46.17■■■■■ 4.98
RAPH1-206ENST00000420371 SMARCA2P51531 1590 aa46.04■■■■■ 4.96
RAPH1-206ENST00000420371 HMGXB3Q12766 1538 aa45.95■■■■■ 4.95
RAPH1-206ENST00000420371 ERCC6Q03468 1493 aa45.93■■■■■ 4.94
RAPH1-206ENST00000420371 BAZ1AQ9NRL2 1556 aaPredicted RBP45.88■■■■■ 4.94
RAPH1-206ENST00000420371 DNAJC5Q9H3Z4 198 aa45.8■■■■■ 4.92
RAPH1-206ENST00000420371 BAZ1BQ9UIG0 1483 aaKnown RBP45.76■■■■■ 4.92
RAPH1-206ENST00000420371 CUX2O14529 1486 aa45.75■■■■■ 4.91
RAPH1-206ENST00000420371 NESP48681 1621 aa45.7■■■■■ 4.91
RAPH1-206ENST00000420371 PEG3Q9GZU2 1588 aa45.62■■■■■ 4.89
RAPH1-206ENST00000420371 MROH2BQ7Z745 1585 aa45.6■■■■■ 4.89
RAPH1-206ENST00000420371 LAMC3Q9Y6N6 1575 aa45.29■■■■■ 4.84
RAPH1-206ENST00000420371 THOC2Q8NI27 1593 aaKnown RBP45.21■■■■■ 4.83
RAPH1-206ENST00000420371 KIF21AQ7Z4S6 1674 aa45.18■■■■■ 4.82
RAPH1-206ENST00000420371 WIZO95785 1651 aa45.13■■■■■ 4.82
RAPH1-206ENST00000420371 PDS5BQ9NTI5 1447 aa45.01■■■■■ 4.8
RAPH1-206ENST00000420371 CADPSQ9ULU8 1353 aa44.89■■■■■ 4.78
RAPH1-206ENST00000420371 MRC2Q9UBG0 1479 aa44.65■■■■■ 4.74
RAPH1-206ENST00000420371 RSF1Q96T23 1441 aaPredicted RBP44.58■■■■■ 4.73
RAPH1-206ENST00000420371 WDR62O43379 1518 aa44.54■■■■■ 4.72
RAPH1-206ENST00000420371 CEP164Q9UPV0 1460 aa44.48■■■■■ 4.71
RAPH1-206ENST00000420371 TOP2AP11388 1531 aaKnown RBP44.45■■■■■ 4.71
RAPH1-206ENST00000420371 FANCD2Q9BXW9 1451 aa44.43■■■■■ 4.7
RAPH1-206ENST00000420371 CFTRP13569 1480 aa44.36■■■■■ 4.69
RAPH1-206ENST00000420371 URB2Q14146 1524 aaKnown RBP44.08■■■■■ 4.65
RAPH1-206ENST00000420371 PRDM2Q13029 1718 aa44.07■■■■■ 4.65
RAPH1-206ENST00000420371 CCDC88BA6NC98 1476 aa43.96■■■■■ 4.63
RAPH1-206ENST00000420371 TRIM41Q8WV44 630 aa43.93■■■■■ 4.62
RAPH1-206ENST00000420371 OSCARQ8IYS5 282 aa43.7■■■■■ 4.59
RAPH1-206ENST00000420371 TOPBP1Q92547 1522 aa43.59■■■■■ 4.57
RAPH1-206ENST00000420371 ZNF608Q9ULD9 1512 aaPredicted RBP43.57■■■■■ 4.56
RAPH1-206ENST00000420371 IFT140Q96RY7 1462 aa43.56■■■■■ 4.56
RAPH1-206ENST00000420371 DNMBPQ6XZF7 1577 aa43.43■■■■■ 4.54
RAPH1-206ENST00000420371 ABCC8Q09428 1581 aa43.41■■■■■ 4.54
RAPH1-206ENST00000420371 EIF4G3O43432 1585 aaKnown RBP43.34■■■■■ 4.53
RAPH1-206ENST00000420371 RIMBP3CA6NJZ7 1639 aa43.22■■■■■ 4.51
RAPH1-206ENST00000420371 RIMBP3BA6NNM3 1639 aa43.22■■■■■ 4.51
RAPH1-206ENST00000420371 TARBP1Q13395 1621 aaKnown RBP43.22■■■■■ 4.51
RAPH1-206ENST00000420371 RIMBP3Q9UFD9 1639 aa43.22■■■■■ 4.51
RAPH1-206ENST00000420371 AQRO60306 1485 aaKnown RBP eCLIP43.17■■■■■ 4.5
RAPH1-206ENST00000420371 POLA1P09884 1462 aaPredicted RBP43.13■■■■■ 4.5
RAPH1-206ENST00000420371 CHD1O14646 1710 aa43.11■■■■■ 4.49
RAPH1-206ENST00000420371 ARHGEF11O15085 1522 aa43.03■■■■■ 4.48
RAPH1-206ENST00000420371 RAD54L2Q9Y4B4 1467 aa43.03■■■■■ 4.48
RAPH1-206ENST00000420371 FBLN2P98095 1184 aa42.96■■■■■ 4.47
RAPH1-206ENST00000420371 SOGA1O94964 1423 aa42.94■■■■■ 4.46
RAPH1-206ENST00000420371 TDRD9Q8NDG6 1382 aaKnown RBP42.9■■■■■ 4.46
RAPH1-206ENST00000420371 FGD5Q6ZNL6 1462 aa42.88■■■■■ 4.46
RAPH1-206ENST00000420371 CUX1P39880 1505 aa42.84■■■■■ 4.45
RAPH1-206ENST00000420371 CYB5RLQ6IPT4 315 aa42.75■■■■■ 4.43
RAPH1-206ENST00000420371 SUPT5HO00267 1087 aaKnown RBP42.73■■■■■ 4.43
RAPH1-206ENST00000420371 SNAPC4Q5SXM2 1469 aa42.72■■■■■ 4.43
RAPH1-206ENST00000420371 WDR97A6NE52 1622 aa42.68■■■■■ 4.42
RAPH1-206ENST00000420371 ARAP1Q96P48 1450 aa42.6■■■■■ 4.41
RAPH1-206ENST00000420371 CHMP7Q8WUX9 453 aaPredicted RBP42.56■■■■■ 4.4
RAPH1-206ENST00000420371 GRIN2BQ13224 1484 aa42.55■■■■■ 4.4
RAPH1-206ENST00000420371 MAGI1Q96QZ7 1491 aaPredicted RBP42.54■■■■■ 4.4
RAPH1-206ENST00000420371 PBRM1Q86U86 1689 aa42.52■■■■■ 4.4
RAPH1-206ENST00000420371 CLASP1Q7Z460 1538 aa42.47■■■■■ 4.39
RAPH1-206ENST00000420371 SYNJ1O43426 1573 aa42.47■■■■■ 4.39
RAPH1-206ENST00000420371 SYNJ2O15056 1496 aa42.42■■■■■ 4.38
RAPH1-206ENST00000420371 GAPVD1Q14C86 1478 aa42.42■■■■■ 4.38
RAPH1-206ENST00000420371 ABCA10Q8WWZ4 1543 aa42.34■■■■■ 4.37
RAPH1-206ENST00000420371 TRHP20396 242 aaPredicted RBP42.33■■■■■ 4.37
RAPH1-206ENST00000420371 ABCA5Q8WWZ7 1642 aa42.33■■■■■ 4.37
RAPH1-206ENST00000420371 WRNQ14191 1432 aaPredicted RBP eCLIP42.16■■■■■ 4.34
RAPH1-206ENST00000420371 BIVM-ERCC5R4GMW8 1640 aa42.16■■■■■ 4.34
RAPH1-206ENST00000420371 TOP2BQ02880 1626 aa42.13■■■■■ 4.34
RAPH1-206ENST00000420371 ADAMTS12P58397 1594 aa42.02■■■■■ 4.32
RAPH1-206ENST00000420371 GRIN2AQ12879 1464 aa42.02■■■■■ 4.32
RAPH1-206ENST00000420371 CEP170Q5SW79 1584 aa41.92■■■■■ 4.3
RAPH1-206ENST00000420371 ERCC6L2Q5T890 1561 aa41.9■■■■■ 4.3
RAPH1-206ENST00000420371 FHAD1B1AJZ9 1412 aa41.84■■■■■ 4.29
RAPH1-206ENST00000420371 NUP160Q12769 1436 aa41.83■■■■■ 4.29
RAPH1-206ENST00000420371 ERICH3Q5RHP9 1530 aa41.8■■■■■ 4.28
RAPH1-206ENST00000420371 SHROOM2Q13796 1616 aa41.71■■■■■ 4.27
RAPH1-206ENST00000420371 PRG4Q92954 1404 aaPredicted RBP41.5■■■■■ 4.23
RAPH1-206ENST00000420371 JPH4Q96JJ6 628 aa41.45■■■■■ 4.23
RAPH1-206ENST00000420371 RUSC2Q8N2Y8 1516 aa41.44■■■■■ 4.22
RAPH1-206ENST00000420371 KIF13AQ9H1H9 1805 aa41.28■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms