RNA–Protein interactions for RNA: ENST00000515707.1

ABCC3-217, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3 BASIC

Gene ABCC3, Length 656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-217ENST00000515707 NISCHQ9Y2I1 1504 aa49.72■■■■■ 5.55
ABCC3-217ENST00000515707 CCDC180Q9P1Z9 1646 aa44.45■■■■■ 4.71
ABCC3-217ENST00000515707 ABCC9O60706 1549 aa43.56■■■■■ 4.56
ABCC3-217ENST00000515707 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.3
ABCC3-217ENST00000515707 NACADO15069 1562 aa41.76■■■■■ 4.28
ABCC3-217ENST00000515707 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.23
ABCC3-217ENST00000515707 ZCCHC6Q5VYS8 1495 aaKnown RBP41.41■■■■■ 4.22
ABCC3-217ENST00000515707 DCAF8L2P0C7V8 631 aa41.41■■■■■ 4.22
ABCC3-217ENST00000515707 DCAF1Q9Y4B6 1507 aa41.18■■■■■ 4.18
ABCC3-217ENST00000515707 UNC13AQ9UPW8 1703 aa41.01■■■■■ 4.16
ABCC3-217ENST00000515707 BICRAQ9NZM4 1560 aa40.62■■■■■ 4.09
ABCC3-217ENST00000515707 PABPN1Q86U42 306 aaKnown RBP eCLIP40.55■■■■■ 4.08
ABCC3-217ENST00000515707 SCRIBQ14160 1630 aa40.46■■■■■ 4.07
ABCC3-217ENST00000515707 SHROOM4Q9ULL8 1493 aa40.23■■■■■ 4.03
ABCC3-217ENST00000515707 DNAJC5BQ9UF47 199 aa40.09■■■■■ 4.01
ABCC3-217ENST00000515707 EIF4G1Q04637 1599 aaKnown RBP39.56■■■■□ 3.92
ABCC3-217ENST00000515707 CC2D2AQ9P2K1 1620 aa39.46■■■■□ 3.91
ABCC3-217ENST00000515707 CECR2Q9BXF3 1484 aa39.18■■■■□ 3.86
ABCC3-217ENST00000515707 SMARCA4P51532 1647 aa38.69■■■■□ 3.78
ABCC3-217ENST00000515707 BAZ1AQ9NRL2 1556 aaPredicted RBP38.59■■■■□ 3.77
ABCC3-217ENST00000515707 NCAPD3P42695 1498 aa38.47■■■■□ 3.75
ABCC3-217ENST00000515707 SMARCA2P51531 1590 aa38.47■■■■□ 3.75
ABCC3-217ENST00000515707 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
ABCC3-217ENST00000515707 HMGXB3Q12766 1538 aa38.36■■■■□ 3.73
ABCC3-217ENST00000515707 PEG3Q9GZU2 1588 aa38.33■■■■□ 3.73
ABCC3-217ENST00000515707 MROH2BQ7Z745 1585 aa38.31■■■■□ 3.72
ABCC3-217ENST00000515707 BAZ1BQ9UIG0 1483 aaKnown RBP38.16■■■■□ 3.7
ABCC3-217ENST00000515707 WIZO95785 1651 aa37.92■■■■□ 3.66
ABCC3-217ENST00000515707 RSF1Q96T23 1441 aaPredicted RBP37.73■■■■□ 3.63
ABCC3-217ENST00000515707 NESP48681 1621 aa37.63■■■■□ 3.61
ABCC3-217ENST00000515707 ERCC6Q03468 1493 aa37.58■■■■□ 3.61
ABCC3-217ENST00000515707 LAMC3Q9Y6N6 1575 aa37.58■■■■□ 3.61
ABCC3-217ENST00000515707 TOP2AP11388 1531 aaKnown RBP37.52■■■■□ 3.6
ABCC3-217ENST00000515707 CUX2O14529 1486 aa37.32■■■■□ 3.56
ABCC3-217ENST00000515707 CADPSQ9ULU8 1353 aa37.3■■■■□ 3.56
ABCC3-217ENST00000515707 KIF21AQ7Z4S6 1674 aa37.29■■■■□ 3.56
ABCC3-217ENST00000515707 PDS5BQ9NTI5 1447 aa37.25■■■■□ 3.55
ABCC3-217ENST00000515707 THOC2Q8NI27 1593 aaKnown RBP37.24■■■■□ 3.55
ABCC3-217ENST00000515707 CFTRP13569 1480 aa37.08■■■■□ 3.53
ABCC3-217ENST00000515707 CCDC88BA6NC98 1476 aa36.99■■■■□ 3.51
ABCC3-217ENST00000515707 PRDM2Q13029 1718 aa36.96■■■■□ 3.51
ABCC3-217ENST00000515707 MRC2Q9UBG0 1479 aa36.94■■■■□ 3.5
ABCC3-217ENST00000515707 CEP164Q9UPV0 1460 aa36.94■■■■□ 3.5
ABCC3-217ENST00000515707 FANCD2Q9BXW9 1451 aa36.93■■■■□ 3.5
ABCC3-217ENST00000515707 WDR62O43379 1518 aa36.86■■■■□ 3.49
ABCC3-217ENST00000515707 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
ABCC3-217ENST00000515707 SUPT5HO00267 1087 aaKnown RBP36.47■■■■□ 3.43
ABCC3-217ENST00000515707 TOPBP1Q92547 1522 aa36.33■■■■□ 3.41
ABCC3-217ENST00000515707 DNAJC5Q9H3Z4 198 aa36.32■■■■□ 3.4
ABCC3-217ENST00000515707 DNMBPQ6XZF7 1577 aa36.31■■■■□ 3.4
ABCC3-217ENST00000515707 ABCC8Q09428 1581 aa36.3■■■■□ 3.4
ABCC3-217ENST00000515707 IFT140Q96RY7 1462 aa36.15■■■■□ 3.38
ABCC3-217ENST00000515707 POLA1P09884 1462 aaPredicted RBP36■■■■□ 3.35
ABCC3-217ENST00000515707 TARBP1Q13395 1621 aaKnown RBP36■■■■□ 3.35
ABCC3-217ENST00000515707 ZNF608Q9ULD9 1512 aaPredicted RBP35.99■■■■□ 3.35
ABCC3-217ENST00000515707 CUX1P39880 1505 aa35.97■■■■□ 3.35
ABCC3-217ENST00000515707 EIF4G3O43432 1585 aaKnown RBP35.95■■■■□ 3.35
ABCC3-217ENST00000515707 FGD5Q6ZNL6 1462 aa35.88■■■■□ 3.33
ABCC3-217ENST00000515707 RAD54L2Q9Y4B4 1467 aa35.8■■■■□ 3.32
ABCC3-217ENST00000515707 SOGA1O94964 1423 aa35.78■■■■□ 3.32
ABCC3-217ENST00000515707 WDR97A6NE52 1622 aa35.75■■■■□ 3.31
ABCC3-217ENST00000515707 AQRO60306 1485 aaKnown RBP eCLIP35.71■■■■□ 3.31
ABCC3-217ENST00000515707 BIVM-ERCC5R4GMW8 1640 aa35.66■■■■□ 3.3
ABCC3-217ENST00000515707 TOP2BQ02880 1626 aa35.63■■■■□ 3.29
ABCC3-217ENST00000515707 WRNQ14191 1432 aaPredicted RBP eCLIP35.61■■■■□ 3.29
ABCC3-217ENST00000515707 SYNJ1O43426 1573 aa35.6■■■■□ 3.29
ABCC3-217ENST00000515707 TDRD9Q8NDG6 1382 aaKnown RBP35.59■■■■□ 3.29
ABCC3-217ENST00000515707 OSCARQ8IYS5 282 aa35.57■■■■□ 3.28
ABCC3-217ENST00000515707 CHD1O14646 1710 aa35.55■■■■□ 3.28
ABCC3-217ENST00000515707 ABCA10Q8WWZ4 1543 aa35.52■■■■□ 3.28
ABCC3-217ENST00000515707 ABCA5Q8WWZ7 1642 aa35.48■■■■□ 3.27
ABCC3-217ENST00000515707 PBRM1Q86U86 1689 aa35.48■■■■□ 3.27
ABCC3-217ENST00000515707 GRIN2BQ13224 1484 aa35.45■■■■□ 3.27
ABCC3-217ENST00000515707 SNAPC4Q5SXM2 1469 aa35.45■■■■□ 3.27
ABCC3-217ENST00000515707 MAGI1Q96QZ7 1491 aaPredicted RBP35.41■■■■□ 3.26
ABCC3-217ENST00000515707 GAPVD1Q14C86 1478 aa35.4■■■■□ 3.26
ABCC3-217ENST00000515707 SYNJ2O15056 1496 aa35.27■■■■□ 3.24
ABCC3-217ENST00000515707 FBLN2P98095 1184 aa35.26■■■■□ 3.24
ABCC3-217ENST00000515707 RIMBP3CA6NJZ7 1639 aa35.21■■■■□ 3.23
ABCC3-217ENST00000515707 RIMBP3BA6NNM3 1639 aa35.21■■■■□ 3.23
ABCC3-217ENST00000515707 RIMBP3Q9UFD9 1639 aa35.21■■■■□ 3.23
ABCC3-217ENST00000515707 ADAMTS12P58397 1594 aa35.17■■■■□ 3.22
ABCC3-217ENST00000515707 ARHGEF11O15085 1522 aa35.15■■■■□ 3.22
ABCC3-217ENST00000515707 CHMP7Q8WUX9 453 aaPredicted RBP35.14■■■■□ 3.22
ABCC3-217ENST00000515707 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
ABCC3-217ENST00000515707 ERICH3Q5RHP9 1530 aa35.11■■■■□ 3.21
ABCC3-217ENST00000515707 GRIN2AQ12879 1464 aa35.02■■■■□ 3.2
ABCC3-217ENST00000515707 TRIM41Q8WV44 630 aa35■■■■□ 3.19
ABCC3-217ENST00000515707 FHAD1B1AJZ9 1412 aa34.98■■■■□ 3.19
ABCC3-217ENST00000515707 CEP170Q5SW79 1584 aa34.88■■■■□ 3.17
ABCC3-217ENST00000515707 KIF27Q86VH2 1401 aa34.87■■■■□ 3.17
ABCC3-217ENST00000515707 NUP160Q12769 1436 aa34.86■■■■□ 3.17
ABCC3-217ENST00000515707 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
ABCC3-217ENST00000515707 CUL7Q14999 1698 aa34.81■■■■□ 3.16
ABCC3-217ENST00000515707 IGF1RP08069 1367 aa34.71■■■■□ 3.15
ABCC3-217ENST00000515707 SHROOM2Q13796 1616 aa34.7■■■■□ 3.15
ABCC3-217ENST00000515707 CYB5RLQ6IPT4 315 aa34.67■■■■□ 3.14
ABCC3-217ENST00000515707 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
ABCC3-217ENST00000515707 ERCC6L2Q5T890 1561 aa34.58■■■■□ 3.13
ABCC3-217ENST00000515707 CARMIL1Q5VZK9 1371 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms