RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 NISCHQ9Y2I1 1504 aa36.43■■■■□ 3.42
DFFA-203ENST00000476658 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
DFFA-203ENST00000476658 ABCC9O60706 1549 aa31.71■■■□□ 2.67
DFFA-203ENST00000476658 DCAF8L2P0C7V8 631 aa30.51■■■□□ 2.47
DFFA-203ENST00000476658 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
DFFA-203ENST00000476658 NACADO15069 1562 aa30.45■■■□□ 2.46
DFFA-203ENST00000476658 ZCCHC6Q5VYS8 1495 aaKnown RBP30.34■■■□□ 2.45
DFFA-203ENST00000476658 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
DFFA-203ENST00000476658 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
DFFA-203ENST00000476658 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
DFFA-203ENST00000476658 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
DFFA-203ENST00000476658 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
DFFA-203ENST00000476658 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
DFFA-203ENST00000476658 SHROOM4Q9ULL8 1493 aa29.21■■■□□ 2.27
DFFA-203ENST00000476658 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
DFFA-203ENST00000476658 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
DFFA-203ENST00000476658 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
DFFA-203ENST00000476658 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
DFFA-203ENST00000476658 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
DFFA-203ENST00000476658 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
DFFA-203ENST00000476658 ATAD2BQ9ULI0 1458 aa28.1■■■□□ 2.09
DFFA-203ENST00000476658 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
DFFA-203ENST00000476658 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
DFFA-203ENST00000476658 NCAPD3P42695 1498 aa28.07■■■□□ 2.08
DFFA-203ENST00000476658 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
DFFA-203ENST00000476658 HMGXB3Q12766 1538 aa27.96■■■□□ 2.07
DFFA-203ENST00000476658 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
DFFA-203ENST00000476658 WIZO95785 1651 aa27.83■■■□□ 2.05
DFFA-203ENST00000476658 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
DFFA-203ENST00000476658 TOP2AP11388 1531 aaKnown RBP27.5■■□□□ 1.99
DFFA-203ENST00000476658 NESP48681 1621 aa27.44■■□□□ 1.98
DFFA-203ENST00000476658 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
DFFA-203ENST00000476658 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
DFFA-203ENST00000476658 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
DFFA-203ENST00000476658 PDS5BQ9NTI5 1447 aa27.17■■□□□ 1.94
DFFA-203ENST00000476658 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
DFFA-203ENST00000476658 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
DFFA-203ENST00000476658 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
DFFA-203ENST00000476658 CFTRP13569 1480 aa27.1■■□□□ 1.93
DFFA-203ENST00000476658 THOC2Q8NI27 1593 aaKnown RBP27.02■■□□□ 1.92
DFFA-203ENST00000476658 CUX2O14529 1486 aa27■■□□□ 1.91
DFFA-203ENST00000476658 PRDM2Q13029 1718 aa27■■□□□ 1.91
DFFA-203ENST00000476658 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
DFFA-203ENST00000476658 CEP164Q9UPV0 1460 aa26.95■■□□□ 1.91
DFFA-203ENST00000476658 MRC2Q9UBG0 1479 aa26.9■■□□□ 1.9
DFFA-203ENST00000476658 WDR62O43379 1518 aa26.8■■□□□ 1.88
DFFA-203ENST00000476658 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
DFFA-203ENST00000476658 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
DFFA-203ENST00000476658 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
DFFA-203ENST00000476658 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
DFFA-203ENST00000476658 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
DFFA-203ENST00000476658 CUX1P39880 1505 aa26.35■■□□□ 1.81
DFFA-203ENST00000476658 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
DFFA-203ENST00000476658 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
DFFA-203ENST00000476658 TARBP1Q13395 1621 aaKnown RBP26.26■■□□□ 1.79
DFFA-203ENST00000476658 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
DFFA-203ENST00000476658 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
DFFA-203ENST00000476658 SOGA1O94964 1423 aa26.22■■□□□ 1.79
DFFA-203ENST00000476658 WRNQ14191 1432 aaPredicted RBP eCLIP26.19■■□□□ 1.78
DFFA-203ENST00000476658 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
DFFA-203ENST00000476658 BIVM-ERCC5R4GMW8 1640 aa26.15■■□□□ 1.78
DFFA-203ENST00000476658 DNAJC5Q9H3Z4 198 aa26.14■■□□□ 1.78
DFFA-203ENST00000476658 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
DFFA-203ENST00000476658 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
DFFA-203ENST00000476658 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.771e-6■■■■□ 23.2
DFFA-203ENST00000476658 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
DFFA-203ENST00000476658 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
DFFA-203ENST00000476658 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
DFFA-203ENST00000476658 GAPVD1Q14C86 1478 aa25.92■■□□□ 1.74
DFFA-203ENST00000476658 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
DFFA-203ENST00000476658 ABCA5Q8WWZ7 1642 aa25.91■■□□□ 1.74
DFFA-203ENST00000476658 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
DFFA-203ENST00000476658 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
DFFA-203ENST00000476658 CHD1O14646 1710 aa25.89■■□□□ 1.74
DFFA-203ENST00000476658 SNAPC4Q5SXM2 1469 aa25.88■■□□□ 1.73
DFFA-203ENST00000476658 FBLN2P98095 1184 aa25.84■■□□□ 1.73
DFFA-203ENST00000476658 MAGI1Q96QZ7 1491 aaPredicted RBP25.83■■□□□ 1.73
DFFA-203ENST00000476658 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
DFFA-203ENST00000476658 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
DFFA-203ENST00000476658 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
DFFA-203ENST00000476658 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
DFFA-203ENST00000476658 KIF27Q86VH2 1401 aa25.64■■□□□ 1.7
DFFA-203ENST00000476658 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
DFFA-203ENST00000476658 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
DFFA-203ENST00000476658 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
DFFA-203ENST00000476658 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
DFFA-203ENST00000476658 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
DFFA-203ENST00000476658 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
DFFA-203ENST00000476658 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
DFFA-203ENST00000476658 IGF1RP08069 1367 aa25.51■■□□□ 1.67
DFFA-203ENST00000476658 CUL7Q14999 1698 aa25.5■■□□□ 1.67
DFFA-203ENST00000476658 ARHGEF11O15085 1522 aa25.48■■□□□ 1.67
DFFA-203ENST00000476658 CEP170Q5SW79 1584 aa25.46■■□□□ 1.67
DFFA-203ENST00000476658 NUP160Q12769 1436 aa25.43■■□□□ 1.66
DFFA-203ENST00000476658 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
DFFA-203ENST00000476658 CARMIL1Q5VZK9 1371 aa25.38■■□□□ 1.65
DFFA-203ENST00000476658 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
DFFA-203ENST00000476658 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
DFFA-203ENST00000476658 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
DFFA-203ENST00000476658 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms