RNA–Protein interactions for RNA: ENST00000270361.15

CAPN10-201, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,453 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-201ENST00000270361 NISCHQ9Y2I1 1504 aa43.1■■■■■ 4.49
CAPN10-201ENST00000270361 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
CAPN10-201ENST00000270361 CCDC180Q9P1Z9 1646 aa36.57■■■■□ 3.44
CAPN10-201ENST00000270361 ZCCHC6Q5VYS8 1495 aaKnown RBP36.54■■■■□ 3.44
CAPN10-201ENST00000270361 SUPT5HO00267 1087 aaKnown RBP36.23■■■■□ 3.39
CAPN10-201ENST00000270361 DCAF1Q9Y4B6 1507 aa35.51■■■■□ 3.27
CAPN10-201ENST00000270361 CHIC1Q5VXU3 224 aa35.48■■■■□ 3.27
CAPN10-201ENST00000270361 DCAF8L2P0C7V8 631 aa35.43■■■■□ 3.26
CAPN10-201ENST00000270361 MYO15BQ96JP2 1530 aa35.3■■■■□ 3.24
CAPN10-201ENST00000270361 HRCP23327 699 aa35.07■■■■□ 3.2
CAPN10-201ENST00000270361 PCGF6Q9BYE7 350 aa34.65■■■■□ 3.14
CAPN10-201ENST00000270361 ABCC9O60706 1549 aa34.52■■■■□ 3.12
CAPN10-201ENST00000270361 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
CAPN10-201ENST00000270361 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.06
CAPN10-201ENST00000270361 SCRIBQ14160 1630 aa34.13■■■■□ 3.05
CAPN10-201ENST00000270361 TRIM26Q12899 539 aaPredicted RBP34.09■■■■□ 3.05
CAPN10-201ENST00000270361 PPARGC1BQ86YN6 1023 aaKnown RBP34.06■■■■□ 3.04
CAPN10-201ENST00000270361 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
CAPN10-201ENST00000270361 TRIM41Q8WV44 630 aa33.86■■■■□ 3.01
CAPN10-201ENST00000270361 NACADO15069 1562 aa33.75■■■□□ 2.99
CAPN10-201ENST00000270361 ZEB1P37275 1124 aaPredicted RBP33.63■■■□□ 2.97
CAPN10-201ENST00000270361 CECR2Q9BXF3 1484 aa33.46■■■□□ 2.95
CAPN10-201ENST00000270361 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
CAPN10-201ENST00000270361 FAM9AQ8IZU1 332 aaPredicted RBP33.4■■■□□ 2.94
CAPN10-201ENST00000270361 WIZO95785 1651 aa33.23■■■□□ 2.91
CAPN10-201ENST00000270361 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
CAPN10-201ENST00000270361 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.87
CAPN10-201ENST00000270361 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
CAPN10-201ENST00000270361 TOP2AP11388 1531 aaKnown RBP32.86■■■□□ 2.85
CAPN10-201ENST00000270361 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
CAPN10-201ENST00000270361 PELP1Q8IZL8 1130 aaKnown RBP32.67■■■□□ 2.82
CAPN10-201ENST00000270361 CCDC88BA6NC98 1476 aa32.66■■■□□ 2.82
CAPN10-201ENST00000270361 WRNQ14191 1432 aaPredicted RBP eCLIP32.64■■■□□ 2.82
CAPN10-201ENST00000270361 SMARCA2P51531 1590 aa32.63■■■□□ 2.81
CAPN10-201ENST00000270361 ABCC8Q09428 1581 aa32.58■■■□□ 2.81
CAPN10-201ENST00000270361 EEA1Q15075 1411 aa32.54■■■□□ 2.8
CAPN10-201ENST00000270361 CCER1Q8TC90 406 aaPredicted RBP32.53■■■□□ 2.8
CAPN10-201ENST00000270361 SCAF1Q9H7N4 1312 aaKnown RBP32.51■■■□□ 2.79
CAPN10-201ENST00000270361 TNIKQ9UKE5 1360 aa32.48■■■□□ 2.79
CAPN10-201ENST00000270361 CEP162Q5TB80 1403 aa32.47■■■□□ 2.79
CAPN10-201ENST00000270361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.47■■■□□ 2.79
CAPN10-201ENST00000270361 UNC13AQ9UPW8 1703 aa32.42■■■□□ 2.78
CAPN10-201ENST00000270361 SOGA1O94964 1423 aa32.38■■■□□ 2.77
CAPN10-201ENST00000270361 CSRNP3Q8WYN3 585 aa32.34■■■□□ 2.77
CAPN10-201ENST00000270361 GOLGA3Q08378 1498 aa32.22■■■□□ 2.75
CAPN10-201ENST00000270361 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
CAPN10-201ENST00000270361 UBTFP17480 764 aaKnown RBP32.18■■■□□ 2.74
CAPN10-201ENST00000270361 ACIN1Q9UKV3 1341 aaKnown RBP32.14■■■□□ 2.74
CAPN10-201ENST00000270361 RUSC2Q8N2Y8 1516 aa32.13■■■□□ 2.73
CAPN10-201ENST00000270361 DIEXFQ68CQ4 756 aaKnown RBP32.08■■■□□ 2.73
CAPN10-201ENST00000270361 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
CAPN10-201ENST00000270361 TTBK1Q5TCY1 1321 aaPredicted RBP32.04■■■□□ 2.72
CAPN10-201ENST00000270361 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
CAPN10-201ENST00000270361 KIF21BO75037 1637 aa31.97■■■□□ 2.71
CAPN10-201ENST00000270361 NEUROD1Q13562 356 aa31.97■■■□□ 2.71
CAPN10-201ENST00000270361 CENPBP07199 599 aaPredicted RBP31.97■■■□□ 2.71
CAPN10-201ENST00000270361 PABPN1Q86U42 306 aaKnown RBP eCLIP31.94■■■□□ 2.7
CAPN10-201ENST00000270361 SYNJ1O43426 1573 aa31.89■■■□□ 2.69
CAPN10-201ENST00000270361 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
CAPN10-201ENST00000270361 CLIP1P30622 1438 aa31.82■■■□□ 2.68
CAPN10-201ENST00000270361 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
CAPN10-201ENST00000270361 ZNF316A6NFI3 1004 aaPredicted RBP31.8■■■□□ 2.68
CAPN10-201ENST00000270361 VPS8Q8N3P4 1428 aa31.76■■■□□ 2.68
CAPN10-201ENST00000270361 GTF3C3Q9Y5Q9 886 aa31.72■■■□□ 2.67
CAPN10-201ENST00000270361 APLP2Q06481 763 aa31.66■■■□□ 2.66
CAPN10-201ENST00000270361 RAPGEF2Q9Y4G8 1499 aa31.61■■■□□ 2.65
CAPN10-201ENST00000270361 HNRNPUL2Q1KMD3 747 aaKnown RBP31.58■■■□□ 2.65
CAPN10-201ENST00000270361 TOP2BQ02880 1626 aa31.57■■■□□ 2.64
CAPN10-201ENST00000270361 ERICH3Q5RHP9 1530 aa31.45■■■□□ 2.62
CAPN10-201ENST00000270361 BIVM-ERCC5R4GMW8 1640 aa31.44■■■□□ 2.62
CAPN10-201ENST00000270361 CLSPNQ9HAW4 1339 aa31.37■■■□□ 2.61
CAPN10-201ENST00000270361 PRXQ9BXM0 1461 aa31.36■■■□□ 2.61
CAPN10-201ENST00000270361 MIER1Q8N108 512 aa31.26■■■□□ 2.6
CAPN10-201ENST00000270361 RANGAP1P46060 587 aaPredicted RBP31.25■■■□□ 2.59
CAPN10-201ENST00000270361 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
CAPN10-201ENST00000270361 ARAP1Q96P48 1450 aa31.22■■■□□ 2.59
CAPN10-201ENST00000270361 MYT1Q01538 1121 aa31.21■■■□□ 2.59
CAPN10-201ENST00000270361 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
CAPN10-201ENST00000270361 YTHDC1Q96MU7 727 aaKnown RBP31.21■■■□□ 2.59
CAPN10-201ENST00000270361 KIF27Q86VH2 1401 aa31.18■■■□□ 2.58
CAPN10-201ENST00000270361 DHX57Q6P158 1386 aaKnown RBP31.12■■■□□ 2.57
CAPN10-201ENST00000270361 CUX1P39880 1505 aa31.12■■■□□ 2.57
CAPN10-201ENST00000270361 RRBP1Q9P2E9 1410 aaKnown RBP31.08■■■□□ 2.57
CAPN10-201ENST00000270361 CFTRP13569 1480 aa31.03■■■□□ 2.56
CAPN10-201ENST00000270361 KANK4Q5T7N3 995 aaPredicted RBP31.03■■■□□ 2.56
CAPN10-201ENST00000270361 CUX2O14529 1486 aa30.99■■■□□ 2.55
CAPN10-201ENST00000270361 CCNB3Q8WWL7 1395 aa30.92■■■□□ 2.54
CAPN10-201ENST00000270361 ARHGAP35Q9NRY4 1499 aa30.91■■■□□ 2.54
CAPN10-201ENST00000270361 MAP3K1Q13233 1512 aa30.8■■■□□ 2.52
CAPN10-201ENST00000270361 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
CAPN10-201ENST00000270361 IGF1RP08069 1367 aa30.73■■■□□ 2.51
CAPN10-201ENST00000270361 TIAM1Q13009 1591 aa30.68■■■□□ 2.5
CAPN10-201ENST00000270361 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
CAPN10-201ENST00000270361 RAB3GAP2Q9H2M9 1393 aa30.62■■■□□ 2.49
CAPN10-201ENST00000270361 CADPSQ9ULU8 1353 aa30.61■■■□□ 2.49
CAPN10-201ENST00000270361 ITGAEP38570 1179 aa30.58■■■□□ 2.49
CAPN10-201ENST00000270361 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
CAPN10-201ENST00000270361 LRRC9Q6ZRR7 1453 aa30.57■■■□□ 2.48
CAPN10-201ENST00000270361 SETD5Q9C0A6 1442 aa30.55■■■□□ 2.48
CAPN10-201ENST00000270361 FGD5Q6ZNL6 1462 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms