RNA–Protein interactions for RNA: ENST00000352879.8

CAPN10-203, Transcript of calpain 10, humanhuman

TSL 1 (best) BASIC

Gene CAPN10, Length 862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-203ENST00000352879 NISCHQ9Y2I1 1504 aa49.13■■■■■ 5.45
CAPN10-203ENST00000352879 ABCC9O60706 1549 aa44.65■■■■■ 4.74
CAPN10-203ENST00000352879 CCDC180Q9P1Z9 1646 aa44.47■■■■■ 4.71
CAPN10-203ENST00000352879 RB1CC1Q8TDY2 1594 aa42.39■■■■■ 4.38
CAPN10-203ENST00000352879 DNAJC5BQ9UF47 199 aa42.2■■■■■ 4.35
CAPN10-203ENST00000352879 NACADO15069 1562 aa41.99■■■■■ 4.31
CAPN10-203ENST00000352879 UNC13AQ9UPW8 1703 aa41.7■■■■■ 4.27
CAPN10-203ENST00000352879 PABPN1Q86U42 306 aaKnown RBP eCLIP41.33■■■■■ 4.21
CAPN10-203ENST00000352879 MYO15BQ96JP2 1530 aa41.31■■■■■ 4.2
CAPN10-203ENST00000352879 BICRAQ9NZM4 1560 aa41.29■■■■■ 4.2
CAPN10-203ENST00000352879 DCAF8L2P0C7V8 631 aa41.23■■■■■ 4.19
CAPN10-203ENST00000352879 ZCCHC6Q5VYS8 1495 aaKnown RBP40.69■■■■■ 4.1
CAPN10-203ENST00000352879 SHROOM4Q9ULL8 1493 aa40.64■■■■■ 4.1
CAPN10-203ENST00000352879 DCAF1Q9Y4B6 1507 aa40.62■■■■■ 4.09
CAPN10-203ENST00000352879 CC2D2AQ9P2K1 1620 aa40.43■■■■■ 4.06
CAPN10-203ENST00000352879 SCRIBQ14160 1630 aa40.37■■■■■ 4.05
CAPN10-203ENST00000352879 CECR2Q9BXF3 1484 aa40.26■■■■■ 4.04
CAPN10-203ENST00000352879 EIF4G1Q04637 1599 aaKnown RBP40.24■■■■■ 4.03
CAPN10-203ENST00000352879 DNAJC5Q9H3Z4 198 aa39.03■■■■□ 3.84
CAPN10-203ENST00000352879 CUX2O14529 1486 aa38.72■■■■□ 3.79
CAPN10-203ENST00000352879 NCAPD3P42695 1498 aa38.71■■■■□ 3.79
CAPN10-203ENST00000352879 ATAD2BQ9ULI0 1458 aa38.54■■■■□ 3.76
CAPN10-203ENST00000352879 ERCC6Q03468 1493 aa38.53■■■■□ 3.76
CAPN10-203ENST00000352879 HMGXB3Q12766 1538 aa38.51■■■■□ 3.76
CAPN10-203ENST00000352879 SMARCA4P51532 1647 aa38.51■■■■□ 3.76
CAPN10-203ENST00000352879 SMARCA2P51531 1590 aa38.44■■■■□ 3.74
CAPN10-203ENST00000352879 NESP48681 1621 aa38.28■■■■□ 3.72
CAPN10-203ENST00000352879 BAZ1AQ9NRL2 1556 aaPredicted RBP38.18■■■■□ 3.7
CAPN10-203ENST00000352879 PEG3Q9GZU2 1588 aa38.17■■■■□ 3.7
CAPN10-203ENST00000352879 THOC2Q8NI27 1593 aaKnown RBP38.15■■■■□ 3.7
CAPN10-203ENST00000352879 BAZ1BQ9UIG0 1483 aaKnown RBP38.13■■■■□ 3.69
CAPN10-203ENST00000352879 LAMC3Q9Y6N6 1575 aa38■■■■□ 3.67
CAPN10-203ENST00000352879 KIF21AQ7Z4S6 1674 aa37.95■■■■□ 3.66
CAPN10-203ENST00000352879 MROH2BQ7Z745 1585 aa37.86■■■■□ 3.65
CAPN10-203ENST00000352879 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
CAPN10-203ENST00000352879 WDR62O43379 1518 aa37.45■■■■□ 3.59
CAPN10-203ENST00000352879 MRC2Q9UBG0 1479 aa37.44■■■■□ 3.58
CAPN10-203ENST00000352879 WIZO95785 1651 aa37.44■■■■□ 3.58
CAPN10-203ENST00000352879 CADPSQ9ULU8 1353 aa37.43■■■■□ 3.58
CAPN10-203ENST00000352879 CEP164Q9UPV0 1460 aa37.19■■■■□ 3.54
CAPN10-203ENST00000352879 FANCD2Q9BXW9 1451 aa37.08■■■■□ 3.53
CAPN10-203ENST00000352879 TRIM41Q8WV44 630 aa37.04■■■■□ 3.52
CAPN10-203ENST00000352879 CFTRP13569 1480 aa37.01■■■■□ 3.51
CAPN10-203ENST00000352879 TOP2AP11388 1531 aaKnown RBP36.92■■■■□ 3.5
CAPN10-203ENST00000352879 PRDM2Q13029 1718 aa36.9■■■■□ 3.5
CAPN10-203ENST00000352879 URB2Q14146 1524 aaKnown RBP36.88■■■■□ 3.49
CAPN10-203ENST00000352879 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
CAPN10-203ENST00000352879 OSCARQ8IYS5 282 aa36.62■■■■□ 3.45
CAPN10-203ENST00000352879 RIMBP3CA6NJZ7 1639 aa36.53■■■■□ 3.44
CAPN10-203ENST00000352879 RIMBP3BA6NNM3 1639 aa36.53■■■■□ 3.44
CAPN10-203ENST00000352879 RIMBP3Q9UFD9 1639 aa36.53■■■■□ 3.44
CAPN10-203ENST00000352879 ZNF608Q9ULD9 1512 aaPredicted RBP36.45■■■■□ 3.43
CAPN10-203ENST00000352879 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
CAPN10-203ENST00000352879 CCDC88BA6NC98 1476 aa36.39■■■■□ 3.42
CAPN10-203ENST00000352879 TOPBP1Q92547 1522 aa36.38■■■■□ 3.41
CAPN10-203ENST00000352879 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
CAPN10-203ENST00000352879 ARHGEF11O15085 1522 aa36.31■■■■□ 3.4
CAPN10-203ENST00000352879 DNMBPQ6XZF7 1577 aa36.25■■■■□ 3.39
CAPN10-203ENST00000352879 CHD1O14646 1710 aa36.22■■■■□ 3.39
CAPN10-203ENST00000352879 TARBP1Q13395 1621 aaKnown RBP36.19■■■■□ 3.38
CAPN10-203ENST00000352879 ABCC8Q09428 1581 aa36.19■■■■□ 3.38
CAPN10-203ENST00000352879 AQRO60306 1485 aaKnown RBP eCLIP35.99■■■■□ 3.355e-8■■■■■ 30.3
CAPN10-203ENST00000352879 POLA1P09884 1462 aaPredicted RBP35.98■■■■□ 3.35
CAPN10-203ENST00000352879 ARAP1Q96P48 1450 aa35.93■■■■□ 3.34
CAPN10-203ENST00000352879 CYB5RLQ6IPT4 315 aa35.79■■■■□ 3.32
CAPN10-203ENST00000352879 RAD54L2Q9Y4B4 1467 aa35.79■■■■□ 3.32
CAPN10-203ENST00000352879 WDR97A6NE52 1622 aa35.79■■■■□ 3.32
CAPN10-203ENST00000352879 CLASP1Q7Z460 1538 aa35.74■■■■□ 3.31
CAPN10-203ENST00000352879 SNAPC4Q5SXM2 1469 aa35.68■■■■□ 3.3
CAPN10-203ENST00000352879 FGD5Q6ZNL6 1462 aa35.67■■■■□ 3.3
CAPN10-203ENST00000352879 SOGA1O94964 1423 aa35.66■■■■□ 3.3
CAPN10-203ENST00000352879 TDRD9Q8NDG6 1382 aaKnown RBP35.64■■■■□ 3.3
CAPN10-203ENST00000352879 FBLN2P98095 1184 aa35.63■■■■□ 3.29
CAPN10-203ENST00000352879 CUX1P39880 1505 aa35.62■■■■□ 3.29
CAPN10-203ENST00000352879 MAGI1Q96QZ7 1491 aaPredicted RBP35.59■■■■□ 3.29
CAPN10-203ENST00000352879 SYNJ1O43426 1573 aa35.59■■■■□ 3.29
CAPN10-203ENST00000352879 PBRM1Q86U86 1689 aa35.54■■■■□ 3.28
CAPN10-203ENST00000352879 TRHP20396 242 aaPredicted RBP35.49■■■■□ 3.27
CAPN10-203ENST00000352879 GRIN2BQ13224 1484 aa35.48■■■■□ 3.27
CAPN10-203ENST00000352879 SYNJ2O15056 1496 aa35.45■■■■□ 3.27
CAPN10-203ENST00000352879 ABCA5Q8WWZ7 1642 aa35.38■■■■□ 3.25
CAPN10-203ENST00000352879 CHMP7Q8WUX9 453 aaPredicted RBP35.33■■■■□ 3.25
CAPN10-203ENST00000352879 GAPVD1Q14C86 1478 aa35.29■■■■□ 3.24
CAPN10-203ENST00000352879 ABCA10Q8WWZ4 1543 aa35.26■■■■□ 3.23
CAPN10-203ENST00000352879 ADAMTS12P58397 1594 aa35.13■■■■□ 3.21
CAPN10-203ENST00000352879 ERCC6L2Q5T890 1561 aa35.12■■■■□ 3.21
CAPN10-203ENST00000352879 GRIN2AQ12879 1464 aa35.08■■■■□ 3.21
CAPN10-203ENST00000352879 CEP170Q5SW79 1584 aa35.06■■■■□ 3.2
CAPN10-203ENST00000352879 SHROOM2Q13796 1616 aa35.03■■■■□ 3.2
CAPN10-203ENST00000352879 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
CAPN10-203ENST00000352879 NUP160Q12769 1436 aa34.99■■■■□ 3.19
CAPN10-203ENST00000352879 TOP2BQ02880 1626 aa34.95■■■■□ 3.19
CAPN10-203ENST00000352879 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
CAPN10-203ENST00000352879 KIF13AQ9H1H9 1805 aa34.85■■■■□ 3.17
CAPN10-203ENST00000352879 FHAD1B1AJZ9 1412 aa34.81■■■■□ 3.16
CAPN10-203ENST00000352879 ERICH3Q5RHP9 1530 aa34.81■■■■□ 3.16
CAPN10-203ENST00000352879 AEBP2Q6ZN18 517 aaPredicted RBP34.74■■■■□ 3.15
CAPN10-203ENST00000352879 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
CAPN10-203ENST00000352879 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
CAPN10-203ENST00000352879 PRG4Q92954 1404 aaPredicted RBP34.57■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms